RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 ZFP36L1Q07352 338 aaKnown RBP4.42□□□□□ -1.7
SCN1A-218ENST00000640036 BSPH1Q075Z2 132 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 SELPLGQ14242 412 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 GAMTQ14353 236 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 RPEL1Q2QD12 228 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 PRICKLE4Q2TBC4 344 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 ZNF260Q3ZCT1 412 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 ABLIM2Q6H8Q1 611 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 LRRC56Q8IYG6 542 aaPredicted RBP4.42□□□□□ -1.7
SCN1A-218ENST00000640036 LINC01356Q8N9X3 169 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 ZNF511Q8NB15 262 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 TMEM147Q9BVK8 224 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 NECAP2Q9NVZ3 263 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 NLRC5Q86WI3 1866 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 LOC285556D6RIA3 1793 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 A0A0B4J293 547 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 GNG7O60262 68 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 CAPNS1P04632 268 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 ELK1P19419 428 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 PPP1CCP36873 323 aaKnown RBP4.42□□□□□ -1.7
SCN1A-218ENST00000640036 NSUN5P2Q63ZY6 315 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 TMEM81Q6P7N7 255 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 SEZ6L2Q6UXD5 910 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 THNSL2Q86YJ6 484 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 WFDC3Q8IUB2 231 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 OR4D10Q8NGI6 311 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 OR51A4Q8NGJ6 313 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 COQ10BQ9H8M1 238 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 A0A1W2PQD3 144 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 M0QZK8 103 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 OR10J4P0C629 311 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 KIR2DL2P43627 348 aaPredicted RBP4.42□□□□□ -1.7
SCN1A-218ENST00000640036 ACVR1Q04771 509 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 Q6ZT83 130 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 NUDT10Q8NFP7 164 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 OR10K1Q8NGX5 313 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 TMEM18Q96B42 140 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 MISP3Q96FF7 219 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 OR2V2Q96R30 315 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 ARHGDIGQ99819 225 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 ETV7Q9Y603 341 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 A0A0G2JLM5 398 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 TAAR5O14804 337 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 KIR2DS2P43631 304 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 LIMS1P48059 325 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 SELENOPP49908 381 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 EFNA4P52798 201 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 TMEM183BQ1AE95 376 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 ZNF774Q6NX45 483 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 ZFP41Q8N8Y5 198 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 PXT1Q8NFP0 134 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 DVL3Q92997 716 aaPredicted RBP4.42□□□□□ -1.7
SCN1A-218ENST00000640036 TMEM106AQ96A25 262 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 FLYWCH2Q96CP2 140 aaKnown RBP4.42□□□□□ -1.7
SCN1A-218ENST00000640036 ZNF552Q9H707 407 aaPredicted RBP4.42□□□□□ -1.7
SCN1A-218ENST00000640036 NOX4Q9NPH5 578 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 TMED3Q9Y3Q3 217 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 K7EPK0 472 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 ZNF701M0R085 212 aaPredicted RBP4.41□□□□□ -1.7
SCN1A-218ENST00000640036 GABRPO00591 440 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 TNFSF12O43508 249 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 CDAP32320 146 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 UCP2P55851 309 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 LRRC37A5PQ49AS3 106 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 ACSF3Q4G176 576 aaPredicted RBP4.41□□□□□ -1.7
SCN1A-218ENST00000640036 ZBTB37Q5TC79 503 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 Q6ZPB1 254 aaPredicted RBP4.41□□□□□ -1.7
SCN1A-218ENST00000640036 FAM71E2Q8N5Q1 922 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 OR51E1Q8TCB6 317 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 ANXA10Q9UJ72 324 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 TMEM200CA6NKL6 621 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 HSD17B6O14756 317 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 HOXA3O43365 443 aaPredicted RBP4.41□□□□□ -1.7
SCN1A-218ENST00000640036 CELA2AP08217 269 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 MGST1P10620 155 aaKnown RBP4.41□□□□□ -1.7
SCN1A-218ENST00000640036 CCL2P13500 99 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 OR3A1P47881 315 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 SERF2P84101 59 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 ZNF117Q03924 483 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 ALKBH1Q13686 389 aaKnown RBP4.41□□□□□ -1.7
SCN1A-218ENST00000640036 CIRBPQ14011 172 aaKnown RBP4.41□□□□□ -1.7
SCN1A-218ENST00000640036 GABRA6Q16445 453 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 DGAT2L7PQ6IED9 249 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 ERGIC1Q969X5 290 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 GNPNAT1Q96EK6 184 aaPredicted RBP4.41□□□□□ -1.7
SCN1A-218ENST00000640036 TIMP4Q99727 224 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 BEX4Q9NWD9 120 aaPredicted RBP4.41□□□□□ -1.7
SCN1A-218ENST00000640036 FOXJ3Q9UPW0 622 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 ST3GAL6Q9Y274 331 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 RCL1Q9Y2P8 373 aaKnown RBP4.41□□□□□ -1.7
SCN1A-218ENST00000640036 GREB1Q4ZG55 1949 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 NAT2P11245 290 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 NMUP48645 174 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 WNT4P56705 351 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 CFAP77Q6ZQR2 320 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 LHX4Q969G2 390 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 SNX22Q96L94 193 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 ZNF714Q96N38 554 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 GPR35Q9HC97 309 aa4.41□□□□□ -1.7
SCN1A-218ENST00000640036 PEMTQ9UBM1 199 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms