RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 KCNK17Q96T54 332 aa12.65□□□□□ -0.38
SCARB2-216ENST00000639300 CABLES2Q9BTV7 478 aa12.65□□□□□ -0.38
SCARB2-216ENST00000639300 GPR35Q9HC97 309 aa12.65□□□□□ -0.38
SCARB2-216ENST00000639300 CYB5R1Q9UHQ9 305 aa12.65□□□□□ -0.38
SCARB2-216ENST00000639300 A0A1W2PR77 199 aa12.65□□□□□ -0.38
SCARB2-216ENST00000639300 TMEM30CPA0ZSE6 113 aa12.65□□□□□ -0.38
SCARB2-216ENST00000639300 M0R1X1 148 aa12.65□□□□□ -0.38
SCARB2-216ENST00000639300 TIAF1O95411 115 aa12.65□□□□□ -0.38
SCARB2-216ENST00000639300 SCGB1D1O95968 90 aa12.65□□□□□ -0.38
SCARB2-216ENST00000639300 APOA2P02652 100 aa12.65□□□□□ -0.38
SCARB2-216ENST00000639300 CTSDP07339 412 aaPredicted RBP12.65□□□□□ -0.38
SCARB2-216ENST00000639300 C19orf48Q6RUI8 117 aa12.65□□□□□ -0.38
SCARB2-216ENST00000639300 CHST5Q9GZS9 411 aa12.65□□□□□ -0.38
SCARB2-216ENST00000639300 TAAR3PQ9P1P4 343 aa12.65□□□□□ -0.38
SCARB2-216ENST00000639300 MKRN2OSH3BPM6 223 aa12.65□□□□□ -0.38
SCARB2-216ENST00000639300 PDGFBP01127 241 aaPredicted RBP12.65□□□□□ -0.38
SCARB2-216ENST00000639300 PGA3P0DJD8 388 aa12.65□□□□□ -0.38
SCARB2-216ENST00000639300 OR2H1Q9GZK4 316 aa12.65□□□□□ -0.38
SCARB2-216ENST00000639300 TMEM38BQ9NVV0 291 aa12.65□□□□□ -0.38
SCARB2-216ENST00000639300 ERVH48-1M5A8F1 160 aa12.64□□□□□ -0.39
SCARB2-216ENST00000639300 HPP00738 406 aa12.64□□□□□ -0.39
SCARB2-216ENST00000639300 IGKV3-11P04433 115 aa12.64□□□□□ -0.39
SCARB2-216ENST00000639300 OR3A1P47881 315 aa12.64□□□□□ -0.39
SCARB2-216ENST00000639300 SOX8P57073 446 aa12.64□□□□□ -0.39
SCARB2-216ENST00000639300 MLF1P58340 268 aa12.64□□□□□ -0.39
SCARB2-216ENST00000639300 UBE2G2P60604 165 aa12.64□□□□□ -0.39
SCARB2-216ENST00000639300 ZP4Q12836 540 aa12.64□□□□□ -0.39
SCARB2-216ENST00000639300 PMS2CLQ68D20 193 aa12.64□□□□□ -0.39
SCARB2-216ENST00000639300 UNQ9370/PRO34162Q6UXP9 181 aa12.64□□□□□ -0.39
SCARB2-216ENST00000639300 LYZL2Q7Z4W2 148 aa12.64□□□□□ -0.39
SCARB2-216ENST00000639300 C1orf87Q8N0U7 546 aa12.64□□□□□ -0.39
SCARB2-216ENST00000639300 PINX1Q96BK5 328 aaKnown RBP12.64□□□□□ -0.39
SCARB2-216ENST00000639300 CDIPTO14735 213 aa12.64□□□□□ -0.39
SCARB2-216ENST00000639300 LTBRP36941 435 aa12.64□□□□□ -0.39
SCARB2-216ENST00000639300 ACTR3CQ9C0K3 210 aaPredicted RBP12.64□□□□□ -0.39
SCARB2-216ENST00000639300 AKIRIN1Q9H9L7 192 aaPredicted RBP12.64□□□□□ -0.39
SCARB2-216ENST00000639300 SLC2A9Q9NRM0 540 aa12.64□□□□□ -0.39
SCARB2-216ENST00000639300 WDR81Q562E7 1941 aa12.64□□□□□ -0.39
SCARB2-216ENST00000639300 COX5AP20674 150 aa12.64□□□□□ -0.39
SCARB2-216ENST00000639300 TRIP6Q15654 476 aaKnown RBP12.64□□□□□ -0.39
SCARB2-216ENST00000639300 PHYHIPLQ96FC7 376 aa12.64□□□□□ -0.39
SCARB2-216ENST00000639300 WDR54Q9H977 334 aa12.64□□□□□ -0.39
SCARB2-216ENST00000639300 MMP26Q9NRE1 261 aa12.64□□□□□ -0.39
SCARB2-216ENST00000639300 PSG11Q9UQ72 335 aa12.64□□□□□ -0.39
SCARB2-216ENST00000639300 BMP5P22003 454 aa12.64□□□□□ -0.39
SCARB2-216ENST00000639300 ZNF92Q03936 586 aa12.64□□□□□ -0.39
SCARB2-216ENST00000639300 CISD2Q8N5K1 135 aaKnown RBP12.64□□□□□ -0.39
SCARB2-216ENST00000639300 LPAR5Q9H1C0 372 aa12.64□□□□□ -0.39
SCARB2-216ENST00000639300 CST2P09228 141 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 RD3LP0DJH9 198 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 SLC25A4P12235 298 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 LPAR6P43657 344 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 PPP1CBP62140 327 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 TUSC1Q2TAM9 212 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 ARTNQ5T4W7 220 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 RAB33BQ9H082 229 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 WSB1Q9Y6I7 421 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 SBF1O95248 1867 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 PPYP01298 95 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 IGLV3-21P80748 117 aaPredicted RBP12.63□□□□□ -0.39
SCARB2-216ENST00000639300 HIKESHIQ53FT3 197 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 UQCC3Q6UW78 93 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 HSD17B13Q7Z5P4 300 aaPredicted RBP12.63□□□□□ -0.39
SCARB2-216ENST00000639300 SHISA5Q8N114 240 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 BVESQ8NE79 360 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 OR10AD1Q8NGE0 317 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 MRGPRDQ8TDS7 321 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 KCNIP2Q9NS61 270 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 ZNF355PQ9NSJ1 428 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 TINAGQ9UJW2 476 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 MTCL1Q9Y4B5 1905 aaKnown RBP12.63□□□□□ -0.39
SCARB2-216ENST00000639300 C3orf80F5H4A9 247 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 CNIH1O95406 144 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 DMWDQ09019 674 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 SPINK9Q5DT21 86 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 BAGE3Q86Y29 109 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 BAGE2Q86Y30 109 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 COMMD5Q9GZQ3 224 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 CCL28Q9NRJ3 127 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 HS3ST3B1Q9Y662 390 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 PI4KAP42356 2102 aa12.63□□□□□ -0.39
SCARB2-216ENST00000639300 A0A1W2PPQ1 181 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 ABCD4O14678 606 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 GPR37O15354 613 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 OR7C2O60412 319 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 Q8IYB0 196 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 C17orf78Q8N4C9 275 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 OR10X1Q8NGY0 326 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 OR13G1Q8NGZ3 307 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 BORCS7Q96B45 105 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 ALX4Q9H161 411 aaPredicted RBP12.62□□□□□ -0.39
SCARB2-216ENST00000639300 LHFPL6Q9Y693 200 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 TRBV5-7A0A0A0MS05 114 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 NPIPB9F8W1W9 429 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 DEFA6Q01524 100 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 TMEM255AQ5JRV8 349 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 FAM27BQ5VT28 67 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 TBC1D26Q86UD7 250 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 GPR137Q96N19 417 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 CIB3Q96Q77 187 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms