RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 PRAMEF5Q5TYX0 476 aa13.51□□□□□ -0.25
SMN2-216ENST00000638794 LHFPL2Q6ZUX7 228 aa13.51□□□□□ -0.25
SMN2-216ENST00000638794 RFT1Q96AA3 541 aa13.51□□□□□ -0.25
SMN2-216ENST00000638794 CENPNQ96H22 339 aaPredicted RBP13.51□□□□□ -0.25
SMN2-216ENST00000638794 OPALINQ96PE5 141 aa13.51□□□□□ -0.25
SMN2-216ENST00000638794 OSBPL10Q9BXB5 764 aa13.51□□□□□ -0.25
SMN2-216ENST00000638794 HMG20AQ9NP66 347 aa13.51□□□□□ -0.25
SMN2-216ENST00000638794 FRRS1LQ9P0K9 344 aa13.51□□□□□ -0.25
SMN2-216ENST00000638794 GLS2Q9UI32 602 aa13.51□□□□□ -0.25
SMN2-216ENST00000638794 GSTK1Q9Y2Q3 226 aa13.51□□□□□ -0.25
SMN2-216ENST00000638794 IGKV1-12A0A0C4DH73 117 aa13.5□□□□□ -0.25
SMN2-216ENST00000638794 FAM172BPA6NC97 362 aa13.5□□□□□ -0.25
SMN2-216ENST00000638794 SAC3D1A6NKF1 404 aa13.5□□□□□ -0.25
SMN2-216ENST00000638794 OR2H2O95918 312 aa13.5□□□□□ -0.25
SMN2-216ENST00000638794 IGKV1D-12P01611 117 aa13.5□□□□□ -0.25
SMN2-216ENST00000638794 ISG15P05161 165 aa13.5□□□□□ -0.25
SMN2-216ENST00000638794 CD24P25063 80 aa13.5□□□□□ -0.25
SMN2-216ENST00000638794 RNF144BQ7Z419 303 aa13.5□□□□□ -0.25
SMN2-216ENST00000638794 ABHD12Q8N2K0 398 aa13.5□□□□□ -0.25
SMN2-216ENST00000638794 OR10AC1Q8NH08 325 aa13.5□□□□□ -0.25
SMN2-216ENST00000638794 MRAPQ8TCY5 172 aa13.5□□□□□ -0.25
SMN2-216ENST00000638794 SGCDQ92629 289 aa13.5□□□□□ -0.25
SMN2-216ENST00000638794 PHF21AQ96BD5 680 aa13.5□□□□□ -0.25
SMN2-216ENST00000638794 SPSB1Q96BD6 273 aa13.5□□□□□ -0.25
SMN2-216ENST00000638794 SPACA5Q96QH8 159 aa13.5□□□□□ -0.25
SMN2-216ENST00000638794 MBOAT4Q96T53 435 aa13.5□□□□□ -0.25
SMN2-216ENST00000638794 EXOSC4Q9NPD3 245 aaKnown RBP13.5□□□□□ -0.25
SMN2-216ENST00000638794 NECAP2Q9NVZ3 263 aa13.5□□□□□ -0.25
SMN2-216ENST00000638794 TRGV10A0A0A0MS01 117 aa13.49□□□□□ -0.25
SMN2-216ENST00000638794 A0A1W2PRX2 142 aa13.49□□□□□ -0.25
SMN2-216ENST00000638794 J3QRE1 110 aa13.49□□□□□ -0.25
SMN2-216ENST00000638794 SH2D1BO14796 132 aa13.49□□□□□ -0.25
SMN2-216ENST00000638794 CDK2P24941 298 aa13.49□□□□□ -0.25
SMN2-216ENST00000638794 GDNFP39905 211 aa13.49□□□□□ -0.25
SMN2-216ENST00000638794 CD83Q01151 205 aa13.49□□□□□ -0.25
SMN2-216ENST00000638794 BDH1Q02338 343 aa13.49□□□□□ -0.25
SMN2-216ENST00000638794 FDX2Q6P4F2 183 aa13.49□□□□□ -0.25
SMN2-216ENST00000638794 HEPN1Q6WQI6 88 aa13.49□□□□□ -0.25
SMN2-216ENST00000638794 OR5AU1Q8NGC0 362 aa13.49□□□□□ -0.25
SMN2-216ENST00000638794 OR51A4Q8NGJ6 313 aa13.49□□□□□ -0.25
SMN2-216ENST00000638794 OR5D18Q8NGL1 313 aa13.49□□□□□ -0.25
SMN2-216ENST00000638794 RNFT2Q96EX2 444 aa13.49□□□□□ -0.25
SMN2-216ENST00000638794 GAL3ST2Q9H3Q3 398 aa13.49□□□□□ -0.25
SMN2-216ENST00000638794 AURKAIP1Q9NWT8 199 aaPredicted RBP13.49□□□□□ -0.25
SMN2-216ENST00000638794 IMPAD1Q9NX62 359 aa13.49□□□□□ -0.25
SMN2-216ENST00000638794 DPM3Q9P2X0 92 aa13.49□□□□□ -0.25
SMN2-216ENST00000638794 DAPL1A0PJW8 107 aa13.48□□□□□ -0.25
SMN2-216ENST00000638794 H3BUI4 141 aa13.48□□□□□ -0.25
SMN2-216ENST00000638794 SLC16A6O15403 523 aa13.48□□□□□ -0.25
SMN2-216ENST00000638794 KDM4BO94953 1096 aa13.48□□□□□ -0.25
SMN2-216ENST00000638794 IGLV1-47P01700 117 aa13.48□□□□□ -0.25
SMN2-216ENST00000638794 HTR1AP08908 422 aa13.48□□□□□ -0.25
SMN2-216ENST00000638794 OCM2P0CE71 109 aa13.48□□□□□ -0.25
SMN2-216ENST00000638794 OCMP0CE72 109 aaPredicted RBP13.48□□□□□ -0.25
SMN2-216ENST00000638794 GLIPR1P48060 266 aa13.48□□□□□ -0.25
SMN2-216ENST00000638794 RASSF2P50749 326 aa13.48□□□□□ -0.25
SMN2-216ENST00000638794 AESQ08117 197 aa13.48□□□□□ -0.25
SMN2-216ENST00000638794 OR52W1Q6IF63 320 aa13.48□□□□□ -0.25
SMN2-216ENST00000638794 C16orf82Q7Z2V1 217 aa13.48□□□□□ -0.25
SMN2-216ENST00000638794 KCTD20Q7Z5Y7 419 aa13.48□□□□□ -0.25
SMN2-216ENST00000638794 RTN4RL2Q86UN3 420 aa13.48□□□□□ -0.25
SMN2-216ENST00000638794 OR13C9Q8NGT0 318 aa13.48□□□□□ -0.25
SMN2-216ENST00000638794 ZNF596Q8TC21 504 aa13.48□□□□□ -0.25
SMN2-216ENST00000638794 TRUB1Q8WWH5 349 aaKnown RBP13.48□□□□□ -0.25
SMN2-216ENST00000638794 COMMD4Q9H0A8 199 aa13.48□□□□□ -0.25
SMN2-216ENST00000638794 LIN7BQ9HAP6 207 aa13.48□□□□□ -0.25
SMN2-216ENST00000638794 FAM53CQ9NYF3 392 aa13.48□□□□□ -0.25
SMN2-216ENST00000638794 HHLA2Q9UM44 414 aa13.48□□□□□ -0.25
SMN2-216ENST00000638794 ODAMA1E959 279 aa13.47□□□□□ -0.25
SMN2-216ENST00000638794 DYNC1I1O14576 645 aa13.47□□□□□ -0.25
SMN2-216ENST00000638794 ZNF44P15621 663 aa13.47□□□□□ -0.25
SMN2-216ENST00000638794 LMO1P25800 156 aa13.47□□□□□ -0.25
SMN2-216ENST00000638794 BRS3P32247 399 aa13.47□□□□□ -0.25
SMN2-216ENST00000638794 CCR9P51686 369 aa13.47□□□□□ -0.25
SMN2-216ENST00000638794 LOXL3P58215 753 aa13.47□□□□□ -0.25
SMN2-216ENST00000638794 TCTEX1D4Q5JR98 221 aa13.47□□□□□ -0.25
SMN2-216ENST00000638794 OR13C3Q8NGS6 347 aa13.47□□□□□ -0.25
SMN2-216ENST00000638794 CORO2AQ92828 525 aa13.47□□□□□ -0.25
SMN2-216ENST00000638794 STMN2Q93045 179 aa13.47□□□□□ -0.25
SMN2-216ENST00000638794 PELI1Q96FA3 418 aa13.47□□□□□ -0.25
SMN2-216ENST00000638794 COQ2Q96H96 371 aa13.47□□□□□ -0.25
SMN2-216ENST00000638794 AKR1E2Q96JD6 320 aa13.47□□□□□ -0.25
SMN2-216ENST00000638794 SLC25A33Q9BSK2 321 aa13.47□□□□□ -0.25
SMN2-216ENST00000638794 ZNF286AQ9HBT8 521 aa13.47□□□□□ -0.25
SMN2-216ENST00000638794 TAS2R3Q9NYW6 316 aa13.47□□□□□ -0.25
SMN2-216ENST00000638794 FUOMA2VDF0 154 aa13.46□□□□□ -0.25
SMN2-216ENST00000638794 OR4C45A6NMZ5 311 aa13.46□□□□□ -0.25
SMN2-216ENST00000638794 LEUTXA8MZ59 168 aa13.46□□□□□ -0.25
SMN2-216ENST00000638794 MT-ND2P03891 347 aa13.46□□□□□ -0.25
SMN2-216ENST00000638794 ALPLP05186 524 aa13.46□□□□□ -0.25
SMN2-216ENST00000638794 CSN2P05814 226 aa13.46□□□□□ -0.25
SMN2-216ENST00000638794 IGLL1P15814 213 aa13.46□□□□□ -0.25
SMN2-216ENST00000638794 CD33P20138 364 aa13.46□□□□□ -0.25
SMN2-216ENST00000638794 CD34P28906 385 aa13.46□□□□□ -0.25
SMN2-216ENST00000638794 PTGFRP43088 359 aa13.46□□□□□ -0.25
SMN2-216ENST00000638794 SCN1BQ07699 218 aa13.46□□□□□ -0.25
SMN2-216ENST00000638794 KPNB1Q14974 876 aaKnown RBP13.46□□□□□ -0.25
SMN2-216ENST00000638794 ABCA11PQ4W5N1 156 aa13.46□□□□□ -0.25
SMN2-216ENST00000638794 SLC25A30Q5SVS4 291 aa13.46□□□□□ -0.25
SMN2-216ENST00000638794 FOXB2Q5VYV0 432 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms