RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 DMRTB1Q96MA1 342 aa17.87■□□□□ 0.45
SCN1B-206ENST00000638536 NR1H4Q96RI1 486 aaPredicted RBP17.87■□□□□ 0.45
SCN1B-206ENST00000638536 SEBOXQ9HB31 216 aaPredicted RBP17.87■□□□□ 0.45
SCN1B-206ENST00000638536 ZNF581Q9P0T4 197 aa17.87■□□□□ 0.45
SCN1B-206ENST00000638536 RNASEK-C17orf49H0YIS7 233 aa17.86■□□□□ 0.45
SCN1B-206ENST00000638536 SC5DO75845 299 aa17.86■□□□□ 0.45
SCN1B-206ENST00000638536 GABRR1P24046 479 aa17.86■□□□□ 0.45
SCN1B-206ENST00000638536 OR3A1P47881 315 aa17.86■□□□□ 0.45
SCN1B-206ENST00000638536 RPS25P62851 125 aaKnown RBP17.86■□□□□ 0.45
SCN1B-206ENST00000638536 SCN1BQ07699 218 aa17.86■□□□□ 0.45
SCN1B-206ENST00000638536 TPBGQ13641 420 aa17.86■□□□□ 0.45
SCN1B-206ENST00000638536 SPIN3Q5JUX0 258 aa17.86■□□□□ 0.45
SCN1B-206ENST00000638536 C9orf139Q6ZV77 190 aa17.86■□□□□ 0.45
SCN1B-206ENST00000638536 TCF23Q7RTU1 214 aa17.86■□□□□ 0.45
SCN1B-206ENST00000638536 LYPD6Q86Y78 171 aa17.86■□□□□ 0.45
SCN1B-206ENST00000638536 ZDHHC22Q8N966 263 aa17.86■□□□□ 0.45
SCN1B-206ENST00000638536 C1orf147Q96MC9 270 aaPredicted RBP17.86■□□□□ 0.45
SCN1B-206ENST00000638536 ING4Q9UNL4 249 aa17.86■□□□□ 0.45
SCN1B-206ENST00000638536 FOXJ3Q9UPW0 622 aa17.86■□□□□ 0.45
SCN1B-206ENST00000638536 A0A1W2PP11 408 aa17.85■□□□□ 0.45
SCN1B-206ENST00000638536 EDDM3BP56851 147 aa17.85■□□□□ 0.45
SCN1B-206ENST00000638536 EDDM3AQ14507 147 aa17.85■□□□□ 0.45
SCN1B-206ENST00000638536 ELP2Q6IA86 826 aa17.85■□□□□ 0.45
SCN1B-206ENST00000638536 FIP1L1Q6UN15 594 aaKnown RBP17.85■□□□□ 0.45
SCN1B-206ENST00000638536 USP43Q70EL4 1123 aa17.85■□□□□ 0.45
SCN1B-206ENST00000638536 PHC2Q8IXK0 858 aa17.85■□□□□ 0.45
SCN1B-206ENST00000638536 PNKDQ8N490 385 aa17.85■□□□□ 0.45
SCN1B-206ENST00000638536 PIP4P2Q8N4L2 257 aa17.85■□□□□ 0.45
SCN1B-206ENST00000638536 MS4A15Q8N5U1 240 aa17.85■□□□□ 0.45
SCN1B-206ENST00000638536 UFD1Q92890 307 aa17.85■□□□□ 0.45
SCN1B-206ENST00000638536 DUX5Q96PT3 197 aa17.85■□□□□ 0.45
SCN1B-206ENST00000638536 MGLLQ99685 303 aa17.85■□□□□ 0.45
SCN1B-206ENST00000638536 EXOSC4Q9NPD3 245 aaKnown RBP17.85■□□□□ 0.45
SCN1B-206ENST00000638536 ACOT13Q9NPJ3 140 aa17.85■□□□□ 0.45
SCN1B-206ENST00000638536 CKLFQ9UBR5 152 aa17.85■□□□□ 0.45
SCN1B-206ENST00000638536 BLOC1S6Q9UL45 172 aa17.85■□□□□ 0.45
SCN1B-206ENST00000638536 IGHV1-69DA0A0B4J2H0 117 aa17.84■□□□□ 0.45
SCN1B-206ENST00000638536 A0A0G2JK05 382 aa17.84■□□□□ 0.45
SCN1B-206ENST00000638536 A0A1W2PRD5 423 aa17.84■□□□□ 0.45
SCN1B-206ENST00000638536 A0A1W2PRF3 423 aa17.84■□□□□ 0.45
SCN1B-206ENST00000638536 A0A1W2PRM7 423 aa17.84■□□□□ 0.45
SCN1B-206ENST00000638536 RNF212BA8MTL3 300 aa17.84■□□□□ 0.45
SCN1B-206ENST00000638536 SH2D1BO14796 132 aa17.84■□□□□ 0.45
SCN1B-206ENST00000638536 IGHV1-69P01742 117 aa17.84■□□□□ 0.45
SCN1B-206ENST00000638536 LMO1P25800 156 aa17.84■□□□□ 0.45
SCN1B-206ENST00000638536 EMX1Q04741 257 aaPredicted RBP17.84■□□□□ 0.45
SCN1B-206ENST00000638536 MLLT11Q13015 90 aaPredicted RBP17.84■□□□□ 0.45
SCN1B-206ENST00000638536 GPR50Q13585 617 aa17.84■□□□□ 0.45
SCN1B-206ENST00000638536 TBCEQ15813 527 aaPredicted RBP17.84■□□□□ 0.45
SCN1B-206ENST00000638536 GRK1Q15835 563 aa17.84■□□□□ 0.45
SCN1B-206ENST00000638536 DEFB112Q30KQ8 113 aa17.84■□□□□ 0.45
SCN1B-206ENST00000638536 PIGYQ3MUY2 71 aa17.84■□□□□ 0.45
SCN1B-206ENST00000638536 METAP1DQ6UB28 335 aaPredicted RBP17.84■□□□□ 0.45
SCN1B-206ENST00000638536 TMEM91Q6ZNR0 172 aa17.84■□□□□ 0.45
SCN1B-206ENST00000638536 Q8NFD4 153 aa17.84■□□□□ 0.45
SCN1B-206ENST00000638536 SUCNR1Q9BXA5 334 aa17.84■□□□□ 0.45
SCN1B-206ENST00000638536 Q9H521 79 aa17.84■□□□□ 0.45
SCN1B-206ENST00000638536 RHOFQ9HBH0 211 aa17.84■□□□□ 0.45
SCN1B-206ENST00000638536 SF3B6Q9Y3B4 125 aaKnown RBP17.84■□□□□ 0.45
SCN1B-206ENST00000638536 M0R1W7 72 aa17.83■□□□□ 0.45
SCN1B-206ENST00000638536 HTR3BO95264 441 aa17.83■□□□□ 0.45
SCN1B-206ENST00000638536 CPEP16870 476 aa17.83■□□□□ 0.45
SCN1B-206ENST00000638536 MTNR1BP49286 362 aa17.83■□□□□ 0.45
SCN1B-206ENST00000638536 DLX6P56179 175 aa17.83■□□□□ 0.45
SCN1B-206ENST00000638536 RSU1Q15404 277 aa17.83■□□□□ 0.45
SCN1B-206ENST00000638536 HCP5Q6MZN7 132 aa17.83■□□□□ 0.45
SCN1B-206ENST00000638536 GDPD3Q7L5L3 318 aa17.83■□□□□ 0.45
SCN1B-206ENST00000638536 CEACAM19Q7Z692 300 aa17.83■□□□□ 0.45
SCN1B-206ENST00000638536 CMTM4Q8IZR5 234 aa17.83■□□□□ 0.45
SCN1B-206ENST00000638536 MUL1Q969V5 352 aa17.83■□□□□ 0.45
SCN1B-206ENST00000638536 ISYNA1Q9NPH2 558 aa17.83■□□□□ 0.45
SCN1B-206ENST00000638536 TENM1Q9UKZ4 2725 aa17.83■□□□□ 0.44
SCN1B-206ENST00000638536 A0A0A6YYJ9 748 aa17.83■□□□□ 0.44
SCN1B-206ENST00000638536 SLC33A1O00400 549 aaPredicted RBP17.83■□□□□ 0.44
SCN1B-206ENST00000638536 ZNF44P15621 663 aa17.83■□□□□ 0.44
SCN1B-206ENST00000638536 GABARAPL2P60520 117 aa17.83■□□□□ 0.44
SCN1B-206ENST00000638536 C1orf122Q6ZSJ8 110 aa17.83■□□□□ 0.44
SCN1B-206ENST00000638536 JAGN1Q8N5M9 183 aa17.83■□□□□ 0.44
SCN1B-206ENST00000638536 OR4D6Q8NGJ1 314 aa17.83■□□□□ 0.44
SCN1B-206ENST00000638536 OR51T1Q8NGJ9 327 aa17.83■□□□□ 0.44
SCN1B-206ENST00000638536 CPNE2Q96FN4 548 aaPredicted RBP17.83■□□□□ 0.44
SCN1B-206ENST00000638536 PPA2Q9H2U2 334 aa17.83■□□□□ 0.44
SCN1B-206ENST00000638536 PRTN3P24158 256 aa17.82■□□□□ 0.44
SCN1B-206ENST00000638536 SSX1Q16384 188 aa17.82■□□□□ 0.44
SCN1B-206ENST00000638536 LRRTM1Q86UE6 522 aa17.82■□□□□ 0.44
SCN1B-206ENST00000638536 OR5D13Q8NGL4 314 aa17.82■□□□□ 0.44
SCN1B-206ENST00000638536 TMEM158Q8WZ71 300 aa17.82■□□□□ 0.44
SCN1B-206ENST00000638536 METTL8Q9H825 291 aaKnown RBP17.82■□□□□ 0.44
SCN1B-206ENST00000638536 UNKLQ9H9P5 680 aaKnown RBP17.82■□□□□ 0.44
SCN1B-206ENST00000638536 GLS2Q9UI32 602 aa17.82■□□□□ 0.44
SCN1B-206ENST00000638536 DEGS1O15121 323 aa17.81■□□□□ 0.44
SCN1B-206ENST00000638536 SERPINA2P20848 420 aa17.81■□□□□ 0.44
SCN1B-206ENST00000638536 MAPK3P27361 379 aaPredicted RBP17.81■□□□□ 0.44
SCN1B-206ENST00000638536 AESQ08117 197 aa17.81■□□□□ 0.44
SCN1B-206ENST00000638536 METTL9Q9H1A3 318 aa17.81■□□□□ 0.44
SCN1B-206ENST00000638536 ING3Q9NXR8 418 aa17.81■□□□□ 0.44
SCN1B-206ENST00000638536 IL36GQ9NZH8 169 aa17.81■□□□□ 0.44
SCN1B-206ENST00000638536 ANK2Q01484 3957 aa17.81■□□□□ 0.44
SCN1B-206ENST00000638536 TRAV24A0A0B4J272 114 aa17.8■□□□□ 0.44
SCN1B-206ENST00000638536 A0A0U1RQK1 487 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms