RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 A0A1W2PPC1 479 aa12.6□□□□□ -0.39
SCARB2-208ENST00000638372 PPP5D1E7EU14 171 aa12.6□□□□□ -0.39
SCARB2-208ENST00000638372 THY1P04216 161 aa12.6□□□□□ -0.39
SCARB2-208ENST00000638372 RPS4Y1P22090 263 aaKnown RBP12.6□□□□□ -0.39
SCARB2-208ENST00000638372 UBE2G2P60604 165 aa12.6□□□□□ -0.39
SCARB2-208ENST00000638372 TMEM267Q0VDI3 215 aaPredicted RBP12.6□□□□□ -0.39
SCARB2-208ENST00000638372 TGIF1Q15583 401 aa12.6□□□□□ -0.39
SCARB2-208ENST00000638372 SCMH1Q96GD3 660 aa12.6□□□□□ -0.39
SCARB2-208ENST00000638372 GPX7Q96SL4 187 aaPredicted RBP12.6□□□□□ -0.39
SCARB2-208ENST00000638372 NARFLQ9H6Q4 476 aa12.6□□□□□ -0.39
SCARB2-208ENST00000638372 MTCH1Q9NZJ7 389 aa12.6□□□□□ -0.39
SCARB2-208ENST00000638372 TO15178 435 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 SEMA7AO75326 666 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 SLC25A4P12235 298 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 LPAR6P43657 344 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 ERHP84090 104 aaKnown RBP12.59□□□□□ -0.39
SCARB2-208ENST00000638372 CLPPQ16740 277 aaPredicted RBP12.59□□□□□ -0.39
SCARB2-208ENST00000638372 RPL7L1Q6DKI1 246 aaKnown RBP12.59□□□□□ -0.39
SCARB2-208ENST00000638372 CHST5Q9GZS9 411 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 LOC285556D6RIA3 1793 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 RAB19A4D1S5 217 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 AGFG2O95081 481 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 TXNDC12O95881 172 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 OR10J4P0C629 311 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 ANKRD34CP0C6C1 535 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 METTL15P1P0C7V9 234 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 SLC25A6P12236 298 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 HABP2Q14520 560 aaPredicted RBP12.59□□□□□ -0.39
SCARB2-208ENST00000638372 PRSS54Q6PEW0 395 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 TMEM104Q8NE00 496 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 RPS4Y2Q8TD47 263 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 PGA3P0DJD8 388 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 TLE1Q04724 770 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 CD200R1LQ6Q8B3 271 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 OR2C3Q8N628 320 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 TAAR6Q96RI8 345 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 TREM2Q9NZC2 230 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 ZMIZ1Q9ULJ6 1067 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 SF3B6Q9Y3B4 125 aaKnown RBP12.59□□□□□ -0.39
SCARB2-208ENST00000638372 FAM96BQ9Y3D0 163 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 CACNA1BQ00975 2339 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 PKDREJQ9NTG1 2253 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 TUBAL3A6NHL2 446 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 LMX1BO60663 402 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 FGF7P21781 194 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 HIST2H3AQ71DI3 136 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 BAGE3Q86Y29 109 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 BAGE2Q86Y30 109 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 OR2D2Q9H210 308 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 MRPL22Q9NWU5 206 aaKnown RBP12.59□□□□□ -0.39
SCARB2-208ENST00000638372 PCNX1Q96RV3 2341 aa12.59□□□□□ -0.39
SCARB2-208ENST00000638372 PDCD11Q14690 1871 aaKnown RBP12.58□□□□□ -0.4
SCARB2-208ENST00000638372 SCGB1D1O95968 90 aa12.58□□□□□ -0.4
SCARB2-208ENST00000638372 RAB4AP20338 218 aa12.58□□□□□ -0.4
SCARB2-208ENST00000638372 ACOT6Q3I5F7 207 aaPredicted RBP12.58□□□□□ -0.4
SCARB2-208ENST00000638372 SPINK9Q5DT21 86 aa12.58□□□□□ -0.4
SCARB2-208ENST00000638372 MOB1BQ7L9L4 216 aa12.58□□□□□ -0.4
SCARB2-208ENST00000638372 B4E171 279 aa12.58□□□□□ -0.4
SCARB2-208ENST00000638372 RNASEK-C17orf49H0YIS7 233 aa12.58□□□□□ -0.4
SCARB2-208ENST00000638372 PIN1P1O15428 100 aa12.58□□□□□ -0.4
SCARB2-208ENST00000638372 ACTL6AO96019 429 aa12.58□□□□□ -0.4
SCARB2-208ENST00000638372 CRHP06850 196 aa12.58□□□□□ -0.4
SCARB2-208ENST00000638372 MPGP29372 298 aa12.58□□□□□ -0.4
SCARB2-208ENST00000638372 TSPAN7P41732 249 aa12.58□□□□□ -0.4
SCARB2-208ENST00000638372 TMEM33P57088 247 aa12.58□□□□□ -0.4
SCARB2-208ENST00000638372 KLF3P57682 345 aaPredicted RBP12.58□□□□□ -0.4
SCARB2-208ENST00000638372 CEBPEQ15744 281 aa12.58□□□□□ -0.4
SCARB2-208ENST00000638372 SLC36A1Q7Z2H8 476 aa12.58□□□□□ -0.4
SCARB2-208ENST00000638372 AKIRIN1Q9H9L7 192 aaPredicted RBP12.58□□□□□ -0.4
SCARB2-208ENST00000638372 SLC7A10Q9NS82 523 aa12.58□□□□□ -0.4
SCARB2-208ENST00000638372 PILRBQ9UKJ0 227 aa12.58□□□□□ -0.4
SCARB2-208ENST00000638372 ANK1P16157 1881 aa12.58□□□□□ -0.4
SCARB2-208ENST00000638372 IGLV1-36A0A0B4J1U3 117 aa12.58□□□□□ -0.4
SCARB2-208ENST00000638372 HMSDA8MTL9 139 aa12.58□□□□□ -0.4
SCARB2-208ENST00000638372 SP1P08047 785 aa12.58□□□□□ -0.4
SCARB2-208ENST00000638372 FLI1Q01543 452 aaPredicted RBP12.58□□□□□ -0.4
SCARB2-208ENST00000638372 ZP4Q12836 540 aa12.58□□□□□ -0.4
SCARB2-208ENST00000638372 C4orf17Q53FE4 359 aa12.58□□□□□ -0.4
SCARB2-208ENST00000638372 C17orf78Q8N4C9 275 aa12.58□□□□□ -0.4
SCARB2-208ENST00000638372 FAM90A27PA6NNH2 459 aa12.58□□□□□ -0.4
SCARB2-208ENST00000638372 LGALSLQ3ZCW2 172 aaPredicted RBP12.58□□□□□ -0.4
SCARB2-208ENST00000638372 NUFIP2Q7Z417 695 aaKnown RBP12.58□□□□□ -0.4
SCARB2-208ENST00000638372 C9orf62Q8N4C0 152 aa12.58□□□□□ -0.4
SCARB2-208ENST00000638372 ADAD2Q8NCV1 583 aaKnown RBP12.58□□□□□ -0.4
SCARB2-208ENST00000638372 ACY3Q96HD9 319 aa12.58□□□□□ -0.4
SCARB2-208ENST00000638372 SPSB2Q99619 263 aa12.58□□□□□ -0.4
SCARB2-208ENST00000638372 MSL2Q9HCI7 577 aa12.58□□□□□ -0.4
SCARB2-208ENST00000638372 CREBBPQ92793 2442 aa12.57□□□□□ -0.4
SCARB2-208ENST00000638372 MS4A18H0YCH9 400 aa12.57□□□□□ -0.4
SCARB2-208ENST00000638372 BCL3P20749 454 aa12.57□□□□□ -0.4
SCARB2-208ENST00000638372 GUK1Q16774 197 aa12.57□□□□□ -0.4
SCARB2-208ENST00000638372 MS4A18Q3C1V0 323 aa12.57□□□□□ -0.4
SCARB2-208ENST00000638372 FAM27BQ5VT28 67 aa12.57□□□□□ -0.4
SCARB2-208ENST00000638372 STUMQ69YW2 141 aa12.57□□□□□ -0.4
SCARB2-208ENST00000638372 TMEM108Q6UXF1 575 aa12.57□□□□□ -0.4
SCARB2-208ENST00000638372 KCNK17Q96T54 332 aa12.57□□□□□ -0.4
SCARB2-208ENST00000638372 TTTY12Q9BZ98 90 aa12.57□□□□□ -0.4
SCARB2-208ENST00000638372 HEATR5BQ9P2D3 2071 aa12.57□□□□□ -0.4
SCARB2-208ENST00000638372 WNK2Q9Y3S1 2297 aa12.57□□□□□ -0.4
SCARB2-208ENST00000638372 TSTD3H0UI37 97 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms