RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 IGKV1D-12P01611 117 aa11.24□□□□□ -0.61
PNKP-228ENST00000637325 ARG1P05089 322 aa11.24□□□□□ -0.61
PNKP-228ENST00000637325 ZNF44P15621 663 aa11.24□□□□□ -0.61
PNKP-228ENST00000637325 CAPGP40121 348 aa11.24□□□□□ -0.61
PNKP-228ENST00000637325 BMXP51813 675 aa11.24□□□□□ -0.61
PNKP-228ENST00000637325 DLX6P56179 175 aa11.24□□□□□ -0.61
PNKP-228ENST00000637325 CDK5R1Q15078 307 aa11.24□□□□□ -0.61
PNKP-228ENST00000637325 KISS1Q15726 138 aa11.24□□□□□ -0.61
PNKP-228ENST00000637325 RNF144BQ7Z419 303 aa11.24□□□□□ -0.61
PNKP-228ENST00000637325 TRAPPC6BQ86SZ2 158 aa11.24□□□□□ -0.61
PNKP-228ENST00000637325 C8orf59Q8N0T1 100 aaPredicted RBP11.24□□□□□ -0.61
PNKP-228ENST00000637325 TPRX1Q8N7U7 411 aa11.24□□□□□ -0.61
PNKP-228ENST00000637325 OR4S1Q8NGB4 309 aa11.24□□□□□ -0.61
PNKP-228ENST00000637325 OR52N4Q8NGI2 321 aa11.24□□□□□ -0.61
PNKP-228ENST00000637325 VCXQ9H320 206 aa11.24□□□□□ -0.61
PNKP-228ENST00000637325 BABAM2Q9NXR7 383 aa11.24□□□□□ -0.61
PNKP-228ENST00000637325 DIMT1Q9UNQ2 313 aaKnown RBP11.24□□□□□ -0.61
PNKP-228ENST00000637325 HSPE1-MOB4S4R3N1 261 aa11.24□□□□□ -0.61
PNKP-228ENST00000637325 FUOMA2VDF0 154 aa11.23□□□□□ -0.61
PNKP-228ENST00000637325 DEGS1O15121 323 aa11.23□□□□□ -0.61
PNKP-228ENST00000637325 PSPNO60542 156 aa11.23□□□□□ -0.61
PNKP-228ENST00000637325 OR2H2O95918 312 aa11.23□□□□□ -0.61
PNKP-228ENST00000637325 RBP4P02753 201 aa11.23□□□□□ -0.61
PNKP-228ENST00000637325 IGHV1-8P0DP01 117 aa11.23□□□□□ -0.61
PNKP-228ENST00000637325 TGFBR2P37173 567 aa11.23□□□□□ -0.61
PNKP-228ENST00000637325 DYNC1I2Q13409 638 aaKnown RBP11.23□□□□□ -0.61
PNKP-228ENST00000637325 LY6EQ16553 131 aa11.23□□□□□ -0.61
PNKP-228ENST00000637325 LRRC75BQ2VPJ9 315 aa11.23□□□□□ -0.61
PNKP-228ENST00000637325 OGFRL1Q5TC84 451 aaPredicted RBP11.23□□□□□ -0.61
PNKP-228ENST00000637325 GGHQ92820 318 aa11.23□□□□□ -0.61
PNKP-228ENST00000637325 FAM192AQ9GZU8 254 aa11.23□□□□□ -0.61
PNKP-228ENST00000637325 MEGF9Q9H1U4 602 aa11.23□□□□□ -0.61
PNKP-228ENST00000637325 PPA2Q9H2U2 334 aa11.23□□□□□ -0.61
PNKP-228ENST00000637325 TAS2R4Q9NYW5 299 aa11.23□□□□□ -0.61
PNKP-228ENST00000637325 CLEC2DQ9UHP7 191 aa11.23□□□□□ -0.61
PNKP-228ENST00000637325 RNF114Q9Y508 228 aa11.23□□□□□ -0.61
PNKP-228ENST00000637325 LINC00312Q9Y6C7 94 aa11.23□□□□□ -0.61
PNKP-228ENST00000637325 MGAM2Q2M2H8 2515 aa11.23□□□□□ -0.61
PNKP-228ENST00000637325 EFCAB10A6NFE3 127 aa11.22□□□□□ -0.61
PNKP-228ENST00000637325 ERP29P30040 261 aaKnown RBP11.22□□□□□ -0.61
PNKP-228ENST00000637325 OR3A1P47881 315 aa11.22□□□□□ -0.61
PNKP-228ENST00000637325 MTNR1BP49286 362 aa11.22□□□□□ -0.61
PNKP-228ENST00000637325 P2RX3P56373 397 aa11.22□□□□□ -0.61
PNKP-228ENST00000637325 ZP1P60852 638 aa11.22□□□□□ -0.61
PNKP-228ENST00000637325 PPP3R1P63098 170 aa11.22□□□□□ -0.61
PNKP-228ENST00000637325 ST3GAL4Q11206 333 aa11.22□□□□□ -0.61
PNKP-228ENST00000637325 XAF1Q6GPH4 301 aa11.22□□□□□ -0.61
PNKP-228ENST00000637325 BRICD5Q6PL45 260 aa11.22□□□□□ -0.61
PNKP-228ENST00000637325 TNFAIP8L1Q8WVP5 186 aa11.22□□□□□ -0.61
PNKP-228ENST00000637325 RGP1Q92546 391 aaPredicted RBP11.22□□□□□ -0.61
PNKP-228ENST00000637325 NR1H4Q96RI1 486 aaPredicted RBP11.22□□□□□ -0.61
PNKP-228ENST00000637325 ZNF696Q9H7X3 374 aa11.22□□□□□ -0.61
PNKP-228ENST00000637325 ZNF281Q9Y2X9 895 aa11.22□□□□□ -0.61
PNKP-228ENST00000637325 UBE2J1Q9Y385 318 aaPredicted RBP11.22□□□□□ -0.61
PNKP-228ENST00000637325 TBL2Q9Y4P3 447 aaKnown RBP11.22□□□□□ -0.61
PNKP-228ENST00000637325 TRRAPQ9Y4A5 3859 aa11.21□□□□□ -0.61
PNKP-228ENST00000637325 TRGV10A0A0A0MS01 117 aa11.21□□□□□ -0.61
PNKP-228ENST00000637325 CASQ2O14958 399 aaPredicted RBP11.21□□□□□ -0.61
PNKP-228ENST00000637325 OGG1O15527 345 aa11.21□□□□□ -0.61
PNKP-228ENST00000637325 PAX6P26367 422 aa11.21□□□□□ -0.61
PNKP-228ENST00000637325 RSU1Q15404 277 aa11.21□□□□□ -0.61
PNKP-228ENST00000637325 AANATQ16613 207 aa11.21□□□□□ -0.61
PNKP-228ENST00000637325 Q6ZSV7 163 aa11.21□□□□□ -0.61
PNKP-228ENST00000637325 TCF23Q7RTU1 214 aa11.21□□□□□ -0.61
PNKP-228ENST00000637325 LHFPL4Q7Z7J7 247 aa11.21□□□□□ -0.61
PNKP-228ENST00000637325 STX19Q8N4C7 294 aa11.21□□□□□ -0.61
PNKP-228ENST00000637325 CHST4Q8NCG5 386 aa11.21□□□□□ -0.61
PNKP-228ENST00000637325 PXT1Q8NFP0 134 aa11.21□□□□□ -0.61
PNKP-228ENST00000637325 OR51A2Q8NGJ7 313 aa11.21□□□□□ -0.61
PNKP-228ENST00000637325 OR52N1Q8NH53 320 aa11.21□□□□□ -0.61
PNKP-228ENST00000637325 LINC01006Q8NI28 216 aa11.21□□□□□ -0.61
PNKP-228ENST00000637325 WFDC12Q8WWY7 111 aa11.21□□□□□ -0.61
PNKP-228ENST00000637325 TMEM106AQ96A25 262 aa11.21□□□□□ -0.61
PNKP-228ENST00000637325 FOXRED1Q96CU9 486 aaPredicted RBP11.21□□□□□ -0.61
PNKP-228ENST00000637325 SMIM19Q96E16 107 aa11.21□□□□□ -0.61
PNKP-228ENST00000637325 AJUBAQ96IF1 538 aa11.21□□□□□ -0.61
PNKP-228ENST00000637325 S100A13Q99584 98 aa11.21□□□□□ -0.61
PNKP-228ENST00000637325 DCLRE1BQ9H816 532 aa11.21□□□□□ -0.61
PNKP-228ENST00000637325 ING3Q9NXR8 418 aa11.21□□□□□ -0.61
PNKP-228ENST00000637325 ING4Q9UNL4 249 aa11.21□□□□□ -0.61
PNKP-228ENST00000637325 SIRT4Q9Y6E7 314 aaPredicted RBP11.21□□□□□ -0.61
PNKP-228ENST00000637325 SESN1Q9Y6P5 492 aa11.21□□□□□ -0.61
PNKP-228ENST00000637325 TET2Q6N021 2002 aaPredicted RBP11.21□□□□□ -0.62
PNKP-228ENST00000637325 A0A0G2JK05 382 aa11.2□□□□□ -0.62
PNKP-228ENST00000637325 MYL12BO14950 172 aa11.2□□□□□ -0.62
PNKP-228ENST00000637325 CLPXO76031 633 aa11.2□□□□□ -0.62
PNKP-228ENST00000637325 ALDOBP05062 364 aa11.2□□□□□ -0.62
PNKP-228ENST00000637325 GNAO1P09471 354 aa11.2□□□□□ -0.62
PNKP-228ENST00000637325 LMO1P25800 156 aa11.2□□□□□ -0.62
PNKP-228ENST00000637325 AESQ08117 197 aa11.2□□□□□ -0.62
PNKP-228ENST00000637325 SRSF4Q08170 494 aaKnown RBP11.2□□□□□ -0.62
PNKP-228ENST00000637325 FAM189A2Q15884 450 aa11.2□□□□□ -0.62
PNKP-228ENST00000637325 PLA1AQ53H76 456 aa11.2□□□□□ -0.62
PNKP-228ENST00000637325 KRBOX4Q5JUW0 171 aa11.2□□□□□ -0.62
PNKP-228ENST00000637325 PRR31Q5SQ13 230 aa11.2□□□□□ -0.62
PNKP-228ENST00000637325 Q6P435 159 aa11.2□□□□□ -0.62
PNKP-228ENST00000637325 CRIP3Q6Q6R5 217 aa11.2□□□□□ -0.62
PNKP-228ENST00000637325 ZFP41Q8N8Y5 198 aa11.2□□□□□ -0.62
PNKP-228ENST00000637325 BPIFB6Q8NFQ5 453 aa11.2□□□□□ -0.62
PNKP-228ENST00000637325 OR11H6Q8NGC7 330 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms