RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 TIMM8AO60220 97 aaPredicted RBP3.95□□□□□ -1.78
SCN1A-210ENST00000635776 WDR1O75083 606 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 HLA-HP01893 362 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 LHX2P50458 406 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 H2BFSP57053 126 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 TAS2R30P59541 319 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 RAB5BP61020 215 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 ERVK-16P61578 105 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 RPUSD3Q6P087 351 aaKnown RBP3.95□□□□□ -1.78
SCN1A-210ENST00000635776 DEFB127Q9H1M4 99 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 CXXC4Q9H2H0 198 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 KCNJ16Q9NPI9 418 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 MLXQ9UH92 298 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 AK3Q9UIJ7 227 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 ATRXP46100 2492 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 C17orf112F2Z3M2 114 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 SDCBPO00560 298 aaPredicted RBP3.95□□□□□ -1.78
SCN1A-210ENST00000635776 SPRY1O43609 319 aaPredicted RBP3.95□□□□□ -1.78
SCN1A-210ENST00000635776 NEURL1O76050 574 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 MBP02144 154 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 CELA2AP08217 269 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 CXCL2P19875 107 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 ATP6V1FQ16864 119 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 SECTM1Q8WVN6 248 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 FSCN3Q9NQT6 498 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 TAAR3PQ9P1P4 343 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 ATP23Q9Y6H3 246 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 TRBV6-6A0A0A6YYG2 114 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 FAM90A26D6RGX4 464 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 CCSO14618 274 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 CCL11P51671 97 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 MEX3BQ6ZN04 569 aaKnown RBP3.95□□□□□ -1.78
SCN1A-210ENST00000635776 TIPARPQ7Z3E1 657 aaKnown RBP3.95□□□□□ -1.78
SCN1A-210ENST00000635776 SHISA5Q8N114 240 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 CNEP1R1Q8N9A8 125 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 OR4D10Q8NGI6 311 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 SLC2A9Q9NRM0 540 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 A0A1B0GU03 582 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 AQP7O14520 342 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 SS18L1O75177 396 aaPredicted RBP3.95□□□□□ -1.78
SCN1A-210ENST00000635776 TMEM268Q5VZI3 342 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 FAM90A1Q86YD7 464 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 OR8G5Q8NG78 346 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 CCDC120Q96HB5 630 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 MT-CO2P00403 227 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 PDGFBP01127 241 aaPredicted RBP3.95□□□□□ -1.78
SCN1A-210ENST00000635776 PPT1P50897 306 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 PPP1CBP62140 327 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 PLAC9Q5JTB6 97 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 OTPQ5XKR4 325 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 ZNF660Q6AZW8 331 aaPredicted RBP3.95□□□□□ -1.78
SCN1A-210ENST00000635776 RGS7BPQ6MZT1 257 aaPredicted RBP3.95□□□□□ -1.78
SCN1A-210ENST00000635776 IGF2-ASQ6U949 168 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 C1orf87Q8N0U7 546 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 UBAC2Q8NBM4 344 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 OR1J1Q8NGS3 322 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 ERGIC1Q969X5 290 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 MARS2Q96GW9 593 aaKnown RBP3.95□□□□□ -1.78
SCN1A-210ENST00000635776 ENY2Q9NPA8 101 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 KCNS2Q9ULS6 477 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 A6NL46 340 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 TSPAN4O14817 238 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 RAMP1O60894 148 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 S100A6P06703 90 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 IDH3GP51553 393 aaPredicted RBP3.95□□□□□ -1.78
SCN1A-210ENST00000635776 HLA-DRB3P79483 266 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 RAB31Q13636 194 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 RAB32Q13637 225 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 AADACL3Q5VUY0 350 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 SEZ6L2Q6UXD5 910 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 RBMXL1Q96E39 390 aaKnown RBP3.95□□□□□ -1.78
SCN1A-210ENST00000635776 DIRC2Q96SL1 478 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 DECR2Q9NUI1 292 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 OR2W1Q9Y3N9 320 aa3.95□□□□□ -1.78
SCN1A-210ENST00000635776 IGKV1-9A0A0C4DH69 117 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 LOC105371267A0A1B0GV96 52 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 ADAM10O14672 748 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 SSX5O60225 188 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 GZMHP20718 246 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 ZNF92Q03936 586 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 ZNF616Q08AN1 781 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 FAM122CQ6P4D5 195 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 RBMS3Q6XE24 437 aaKnown RBP3.94□□□□□ -1.78
SCN1A-210ENST00000635776 FAM169BQ8N8A8 192 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 KDF1Q8NAX2 398 aaPredicted RBP3.94□□□□□ -1.78
SCN1A-210ENST00000635776 BHLHE23Q8NDY6 225 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 OR1S2Q8NGQ3 325 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 TAAR6Q96RI8 345 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 C2orf16Q68DN1 1984 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 LRRC30A6NM36 301 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 H0Y980 276 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 IFNL4K9M1U5 179 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 PRRG2O14669 202 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 MPPED1O15442 326 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 MMP7P09237 267 aaPredicted RBP3.94□□□□□ -1.78
SCN1A-210ENST00000635776 LILRB2Q8N423 598 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 OR10Z1Q8NGY1 313 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 BOD1Q96IK1 185 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 C5orf66Q9H5L9 145 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 AKIRIN1Q9H9L7 192 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms