RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 SSUH2Q9Y2M2 353 aa6.49□□□□□ -1.37
PKP4-217ENST00000628904 RCL1Q9Y2P8 373 aaKnown RBP6.49□□□□□ -1.37
PKP4-217ENST00000628904 CCDC168Q8NDH2 2452 aa6.49□□□□□ -1.37
PKP4-217ENST00000628904 DOPEY2Q9Y3R5 2298 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 PLSCR5A0PG75 271 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 TTLL8A6PVC2 850 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 H0YL77 283 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 SSSCA1O60232 199 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 AADACP22760 399 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 OR2A2Q6IF42 318 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 C11orf87Q6NUJ2 197 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 BTNL3Q6UXE8 466 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 ST8SIA2Q92186 375 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 NINJ1Q92982 152 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 NARFLQ9H6Q4 476 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 NECAP2Q9NVZ3 263 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 ANXA10Q9UJ72 324 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 MEMO1Q9Y316 297 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 MSGN1A6NI15 193 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 HSPB2A8KAH6 182 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 SNRPGP15A8MWD9 76 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 TMEM14DPA8MWL7 114 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 C21orf140B9A014 251 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 M0R036 132 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 SYNGR3O43761 229 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 CRYZL1O95825 349 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 FUT6P51993 359 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 CLDN18P56856 261 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 B3GALT5-AS1P59052 145 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 HSPB2Q16082 182 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 SHEQ5VZ18 495 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 ZNF610Q8N9Z0 462 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 OR1S1Q8NH92 325 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 AQP3Q92482 292 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 APOBEC3DQ96AK3 386 aaPredicted RBP6.48□□□□□ -1.37
PKP4-217ENST00000628904 MARS2Q96GW9 593 aaKnown RBP6.48□□□□□ -1.37
PKP4-217ENST00000628904 CCL28Q9NRJ3 127 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 ZNF292O60281 2723 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 F8W036 122 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 KRASP01116 189 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 OPN1MWP04001 364 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 GSTP1P09211 210 aaKnown RBP6.48□□□□□ -1.37
PKP4-217ENST00000628904 OPN1MW2P0DN77 364 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 OPN1MW3P0DN78 364 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 FUT3P21217 361 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 AGTR1P30556 359 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 PPT1P50897 306 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 BLOC1S1P78537 153 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 ZNF816Q0VGE8 651 aaPredicted RBP6.48□□□□□ -1.37
PKP4-217ENST00000628904 GNMTQ14749 295 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 ESCO2Q56NI9 601 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 FDX2Q6P4F2 183 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 LHFPL2Q6ZUX7 228 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 LINC00052Q96N35 136 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 NSG2Q9Y328 171 aa6.48□□□□□ -1.37
PKP4-217ENST00000628904 A0A1B0GW55 424 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 SMCO3A2RU48 225 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 LEUTXA8MZ59 168 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 CST2P09228 141 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 DUX4L2P0CJ85 424 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 DUX4L3P0CJ86 424 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 DUX4L4P0CJ87 422 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 DUX4L5P0CJ88 424 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 DUX4L6P0CJ89 424 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 DUX4L7P0CJ90 424 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 FSTP19883 344 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 POLR2GP62487 172 aaKnown RBP eCLIP6.47□□□□□ -1.37
PKP4-217ENST00000628904 AESQ08117 197 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 FGL1Q08830 312 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 EIF3IQ13347 325 aaKnown RBP6.47□□□□□ -1.37
PKP4-217ENST00000628904 MPPED2Q15777 294 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 FBXW9Q5XUX1 488 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 RPL7L1Q6DKI1 246 aaKnown RBP6.47□□□□□ -1.37
PKP4-217ENST00000628904 OR8G2PQ6IF36 304 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 OR1K1Q8NGR3 316 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 MRGPRDQ8TDS7 321 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 RBPMSQ93062 196 aaKnown RBP6.47□□□□□ -1.37
PKP4-217ENST00000628904 RRNAD1Q96FB5 475 aaKnown RBP6.47□□□□□ -1.37
PKP4-217ENST00000628904 SF3B5Q9BWJ5 86 aaKnown RBP6.47□□□□□ -1.37
PKP4-217ENST00000628904 GNG12Q9UBI6 72 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 DUX4Q9UBX2 424 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 RABL2BQ9UNT1 228 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 PROB1E7EW31 1015 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 RGS13O14921 159 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 ATXN7O15265 892 aaPredicted RBP6.47□□□□□ -1.37
PKP4-217ENST00000628904 S100GP29377 79 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 HOXA6P31267 233 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 PPP1CBP62140 327 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 FAM189A2Q15884 450 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 GGNBP1Q5YKI7 109 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 SLC36A1Q7Z2H8 476 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 OR5M8Q8NGP6 311 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 LEAP2Q969E1 77 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 TMEM54Q969K7 222 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 DCTN5Q9BTE1 182 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 RFNGQ9Y644 331 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 K7EM74 188 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 CYTIPO60759 359 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 SCGNO76038 276 aa6.47□□□□□ -1.37
PKP4-217ENST00000628904 IL2RAP01589 272 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms