RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 DEGS1O15121 323 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 LDLRAD4O15165 306 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 TMPRSS2O15393 492 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 NDUFA2O43678 99 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 OR2H2O95918 312 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 CHRM2P08172 466 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 DUX4L2P0CJ85 424 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 DUX4L3P0CJ86 424 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 DUX4L4P0CJ87 422 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 DUX4L5P0CJ88 424 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 DUX4L6P0CJ89 424 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 DUX4L7P0CJ90 424 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 RPS2P15880 293 aaKnown RBP7.1□□□□□ -1.27
SGMS1-211ENST00000626236 SLC25A16P16260 332 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 RAB6AP20340 208 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 CPT2P23786 658 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 VEGFCP49767 419 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 SCAND1P57086 179 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 IL13RA1P78552 427 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 COL10A1Q03692 680 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 IL13RA2Q14627 380 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 MPV17LQ2QL34 196 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 UBE2NLQ5JXB2 153 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 ATAD3CQ5T2N8 411 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 MZT2AQ6P582 158 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 DUX4L9Q6RFH8 374 aaPredicted RBP7.1□□□□□ -1.27
SGMS1-211ENST00000626236 ZNF788Q6ZQV5 615 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 SLC36A1Q7Z2H8 476 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 ZNF561Q8N587 486 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 SAMD12Q8N8I0 201 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 ASCC1Q8N9N2 400 aaKnown RBP7.1□□□□□ -1.27
SGMS1-211ENST00000626236 WFDC11Q8NEX6 87 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 OR8B3Q8NGG8 313 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 CLDND2Q8NHS1 167 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 MCFD2Q8NI22 146 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 ACOT12Q8WYK0 555 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 PTX4Q96A99 478 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 GAFA1Q96PS6 74 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 OR8B2Q96RD0 313 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 URM1Q9BTM9 101 aaKnown RBP7.1□□□□□ -1.27
SGMS1-211ENST00000626236 TM2D1Q9BX74 207 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 SLIRPQ9GZT3 109 aaKnown RBP7.1□□□□□ -1.27
SGMS1-211ENST00000626236 DNTTIP1Q9H147 329 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 ATG5Q9H1Y0 275 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 ZNF665Q9H7R5 613 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 ZNF581Q9P0T4 197 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 CTSZQ9UBR2 303 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 DUX4Q9UBX2 424 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 MIOXQ9UGB7 285 aa7.1□□□□□ -1.27
SGMS1-211ENST00000626236 MAP1AP78559 2803 aaPredicted RBP7.1□□□□□ -1.27
SGMS1-211ENST00000626236 A0A0A6YYD4 124 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 METTL21EPA6NDL7 271 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 FAM90A10PA6NDY2 464 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 FAM90A18PA6NE21 464 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 FAM90A16PA6NEW6 464 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 FAM90A20PA6NIJ5 464 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 FAM90A8PA6NJQ4 464 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 FAM90A7PA6NKC0 464 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 FAM90A22PA8MWA6 464 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 FAM90A12PA8MX19 464 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 FAM90A5PA8MXJ8 464 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 FAM90A23PA8MXZ1 464 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 SLC33A1O00400 549 aaPredicted RBP7.09□□□□□ -1.27
SGMS1-211ENST00000626236 HSPB6O14558 160 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 SIGLEC5O15389 551 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 RGS5O15539 181 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 NDUFB3O43676 98 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 HPGDSO60760 199 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 IGHV2-5P01817 119 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 FAM90A15PP0C7V4 464 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 FAM90A13PP0C7W8 464 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 FAM90A14PP0C7W9 464 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 FAM90A24PP0C7X0 464 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 SELLP14151 372 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 AMY2BP19961 511 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 USF1P22415 310 aaPredicted RBP7.09□□□□□ -1.27
SGMS1-211ENST00000626236 IL2RGP31785 369 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 PITPNBP48739 271 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 DYNC1I2Q13409 638 aaKnown RBP7.09□□□□□ -1.27
SGMS1-211ENST00000626236 FAM189A2Q15884 450 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 CNPY1Q3B7I2 92 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 NKAPLQ5M9Q1 402 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 LCE2AQ5TA79 106 aaPredicted RBP7.09□□□□□ -1.27
SGMS1-211ENST00000626236 ATPAF1Q5TC12 328 aaPredicted RBP7.09□□□□□ -1.27
SGMS1-211ENST00000626236 Q6P435 159 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 NLRC3Q7RTR2 1065 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 BIVMQ86UB2 503 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 CHST4Q8NCG5 386 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 ZNRF1Q8ND25 227 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 TMEM185AQ8NFB2 350 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 OR56B1Q8NGI3 324 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 ST8SIA4Q92187 359 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 SLC25A38Q96DW6 304 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 NEIL1Q96FI4 390 aaPredicted RBP7.09□□□□□ -1.27
SGMS1-211ENST00000626236 SDSLQ96GA7 329 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 MED30Q96HR3 178 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 C6orf62Q9GZU0 229 aaPredicted RBP7.09□□□□□ -1.27
SGMS1-211ENST00000626236 CHST6Q9GZX3 395 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 PATZ1Q9HBE1 687 aaKnown RBP7.09□□□□□ -1.27
SGMS1-211ENST00000626236 RHBDL2Q9NX52 303 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms