RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 SLC18B1Q6NT16 456 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 ANKRD16Q6P6B7 361 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 KCTD18Q6PI47 426 aaPredicted RBP10.06□□□□□ -0.8
LINC00538-201ENST00000626109 DNM1P46Q6ZS02 220 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 DPY19L4Q7Z388 723 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 ZNF561Q8N587 486 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 TMEM251Q8N6I4 163 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 OTOSQ8NHW6 89 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 ASB13Q8WXK3 278 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 TAAR8Q969N4 342 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 TMPRSS13Q9BYE2 586 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 IFT46Q9NQC8 304 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 PRR13Q9NZ81 148 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 MTFP1Q9UDX5 166 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 SLC22A13Q9Y226 551 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 VDAC3Q9Y277 283 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 ZFHX4Q86UP3 3567 aa10.06□□□□□ -0.8
LINC00538-201ENST00000626109 PRR32B1ATL7 298 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 XRCC2O43543 280 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 TRAPPC6AO75865 159 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 PET100P0DJ07 73 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 ZP3P21754 424 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 MAGEA5P43359 124 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 SELENOPP49908 381 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 LSM6P62312 80 aaKnown RBP10.05□□□□□ -0.8
LINC00538-201ENST00000626109 PUDPQ08623 228 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 FAM159AQ6UWV7 190 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 Q6ZTK2 550 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 SEM1Q6ZVN7 128 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 OR14L1PQ8NHC6 308 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 ZBTB8AQ96BR9 441 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 SYT4Q9H2B2 425 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 NARFLQ9H6Q4 476 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 ZNF430Q9H8G1 570 aaPredicted RBP10.05□□□□□ -0.8
LINC00538-201ENST00000626109 CKLFQ9UBR5 152 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 KLHDC2Q9Y2U9 406 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 TPRP12270 2363 aaKnown RBP10.05□□□□□ -0.8
LINC00538-201ENST00000626109 MAP1BP46821 2468 aaKnown RBP10.05□□□□□ -0.8
LINC00538-201ENST00000626109 TEX13DA0A0J9YY54 714 aaPredicted RBP10.05□□□□□ -0.8
LINC00538-201ENST00000626109 OR2J3O76001 311 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 RGS11O94810 467 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 OR2A4O95047 310 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 BGLAPP02818 100 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 CD2P06729 351 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 NFYAP23511 347 aaPredicted RBP10.05□□□□□ -0.8
LINC00538-201ENST00000626109 SSTR2P30874 369 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 DLX5P56178 289 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 RPL27P61353 136 aaKnown RBP10.05□□□□□ -0.8
LINC00538-201ENST00000626109 PLPPR5Q32ZL2 321 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 GLT8D1Q68CQ7 371 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 HIST2H2BCQ6DN03 193 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 HIST2H2BDQ6DRA6 164 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 GRINAQ7Z429 371 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 GPAT4Q86UL3 456 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 CCDC71LQ8N9Z2 235 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 NECAP1Q8NC96 275 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 RNF133Q8WVZ7 376 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 CCDC120Q96HB5 630 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 C4orf45Q96LM5 186 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 OR2A7Q96R45 310 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 OR8B4Q96RC9 309 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 ULBP2Q9BZM5 246 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 CHIAQ9BZP6 476 aa10.05□□□□□ -0.8
LINC00538-201ENST00000626109 MRPS18CQ9Y3D5 142 aaKnown RBP10.05□□□□□ -0.8
LINC00538-201ENST00000626109 LOC100289279A0A1B0GTE1 492 aa10.04□□□□□ -0.8
LINC00538-201ENST00000626109 FAM90A10PA6NDY2 464 aa10.04□□□□□ -0.8
LINC00538-201ENST00000626109 GGT3PA6NGU5 568 aa10.04□□□□□ -0.8
LINC00538-201ENST00000626109 MBD3L5A6NJ08 208 aaPredicted RBP10.04□□□□□ -0.8
LINC00538-201ENST00000626109 H7C1C5 153 aa10.04□□□□□ -0.8
LINC00538-201ENST00000626109 SULT1C2O00338 296 aa10.04□□□□□ -0.8
LINC00538-201ENST00000626109 DCTN6O00399 190 aa10.04□□□□□ -0.8
LINC00538-201ENST00000626109 RAB29O14966 203 aa10.04□□□□□ -0.8
LINC00538-201ENST00000626109 TOXO94900 526 aa10.04□□□□□ -0.8
LINC00538-201ENST00000626109 HPNP05981 417 aa10.04□□□□□ -0.8
LINC00538-201ENST00000626109 AKAIN1P0CW23 69 aa10.04□□□□□ -0.8
LINC00538-201ENST00000626109 PRSS3P35030 304 aa10.04□□□□□ -0.8
LINC00538-201ENST00000626109 POLR2HP52434 150 aaKnown RBP10.04□□□□□ -0.8
LINC00538-201ENST00000626109 LCN6P62502 163 aa10.04□□□□□ -0.8
LINC00538-201ENST00000626109 FOXF1Q12946 379 aa10.04□□□□□ -0.8
LINC00538-201ENST00000626109 SLC10A1Q14973 349 aa10.04□□□□□ -0.8
LINC00538-201ENST00000626109 OPCMLQ14982 345 aa10.04□□□□□ -0.8
LINC00538-201ENST00000626109 TMEM255AQ5JRV8 349 aa10.04□□□□□ -0.8
LINC00538-201ENST00000626109 PCSK4Q6UW60 755 aa10.04□□□□□ -0.8
LINC00538-201ENST00000626109 COMMD7Q86VX2 200 aa10.04□□□□□ -0.8
LINC00538-201ENST00000626109 TMEM17Q86X19 198 aa10.04□□□□□ -0.8
LINC00538-201ENST00000626109 GCDHQ92947 438 aaPredicted RBP10.04□□□□□ -0.8
LINC00538-201ENST00000626109 ZNF2Q9BSG1 426 aaPredicted RBP10.04□□□□□ -0.8
LINC00538-201ENST00000626109 KIF25Q9UIL4 384 aa10.04□□□□□ -0.8
LINC00538-201ENST00000626109 EML6Q6ZMW3 1958 aa10.04□□□□□ -0.8
LINC00538-201ENST00000626109 TRAV8-7A0A075B6U6 113 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 TRBV7-9A0A0J9YWB2 115 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 MEGF11A6BM72 1044 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 C11orf98E9PRG8 122 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 OR2T1O43869 369 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 ALDOBP05062 364 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 SPP1P10451 314 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 ZNF17P17021 662 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 GPX4P36969 197 aaPredicted RBP10.03□□□□□ -0.8
LINC00538-201ENST00000626109 SPAG16Q8N0X2 631 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 PRSS35Q8N3Z0 413 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms