RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 EIF2S3LQ2VIR3 472 aaKnown RBP15.28■□□□□ 0.04
PCF11-207ENST00000624931 LFNGQ8NES3 379 aa15.28■□□□□ 0.04
PCF11-207ENST00000624931 HIST1H2BAQ96A08 127 aa15.28■□□□□ 0.04
PCF11-207ENST00000624931 MALSU1Q96EH3 234 aa15.28■□□□□ 0.04
PCF11-207ENST00000624931 PBDC1Q9BVG4 233 aa15.28■□□□□ 0.04
PCF11-207ENST00000624931 PNRC2Q9NPJ4 139 aaKnown RBP15.28■□□□□ 0.04
PCF11-207ENST00000624931 FBXL17Q9UF56 701 aa15.28■□□□□ 0.04
PCF11-207ENST00000624931 A0A1B0GW64 132 aa15.27■□□□□ 0.04
PCF11-207ENST00000624931 ZNF726A6NNF4 738 aa15.27■□□□□ 0.04
PCF11-207ENST00000624931 ZNHIT1O43257 154 aa15.27■□□□□ 0.04
PCF11-207ENST00000624931 HTR3BO95264 441 aa15.27■□□□□ 0.04
PCF11-207ENST00000624931 PI3P19957 117 aa15.27■□□□□ 0.04
PCF11-207ENST00000624931 PTGER4P35408 488 aa15.27■□□□□ 0.04
PCF11-207ENST00000624931 SNCAP37840 140 aa15.27■□□□□ 0.04
PCF11-207ENST00000624931 GUCA1AP43080 201 aaPredicted RBP15.27■□□□□ 0.04
PCF11-207ENST00000624931 TMEM33P57088 247 aa15.27■□□□□ 0.04
PCF11-207ENST00000624931 CARD18P57730 90 aa15.27■□□□□ 0.04
PCF11-207ENST00000624931 HIST2H3AQ71DI3 136 aa15.27■□□□□ 0.04
PCF11-207ENST00000624931 BHLHE23Q8NDY6 225 aa15.27■□□□□ 0.04
PCF11-207ENST00000624931 C2CD4CQ8TF44 421 aa15.27■□□□□ 0.04
PCF11-207ENST00000624931 PGAM5Q96HS1 289 aa15.27■□□□□ 0.04
PCF11-207ENST00000624931 SPACA5Q96QH8 159 aa15.27■□□□□ 0.04
PCF11-207ENST00000624931 SPRR3Q9UBC9 169 aa15.27■□□□□ 0.04
PCF11-207ENST00000624931 V9GYS6 101 aa15.27■□□□□ 0.04
PCF11-207ENST00000624931 GPR137BO60478 399 aa15.26■□□□□ 0.03
PCF11-207ENST00000624931 ACAA1P09110 424 aaPredicted RBP15.26■□□□□ 0.03
PCF11-207ENST00000624931 DANCRP0C864 163 aa15.26■□□□□ 0.03
PCF11-207ENST00000624931 ZNF43P17038 809 aa15.26■□□□□ 0.03
PCF11-207ENST00000624931 CLDN17P56750 224 aa15.26■□□□□ 0.03
PCF11-207ENST00000624931 RAC3P60763 192 aa15.26■□□□□ 0.03
PCF11-207ENST00000624931 SLC10A1Q14973 349 aa15.26■□□□□ 0.03
PCF11-207ENST00000624931 FAM57BQ71RH2 274 aa15.26■□□□□ 0.03
PCF11-207ENST00000624931 ZADH2Q8N4Q0 377 aa15.26■□□□□ 0.03
PCF11-207ENST00000624931 ZNF385AQ96PM9 386 aaKnown RBP15.26■□□□□ 0.03
PCF11-207ENST00000624931 GINS3Q9BRX5 216 aa15.26■□□□□ 0.03
PCF11-207ENST00000624931 NAA11Q9BSU3 229 aaPredicted RBP15.26■□□□□ 0.03
PCF11-207ENST00000624931 RPS10P5Q9NQ39 176 aa15.26■□□□□ 0.03
PCF11-207ENST00000624931 AMDHD2Q9Y303 409 aa15.26■□□□□ 0.03
PCF11-207ENST00000624931 ANKRD11Q6UB99 2663 aaPredicted RBP15.26■□□□□ 0.03
PCF11-207ENST00000624931 URB1O60287 2271 aaKnown RBP15.26■□□□□ 0.03
PCF11-207ENST00000624931 IGKV1-9A0A0C4DH69 117 aa15.26■□□□□ 0.03
PCF11-207ENST00000624931 SDCBPO00560 298 aaPredicted RBP15.26■□□□□ 0.03
PCF11-207ENST00000624931 EIF1BO60739 113 aaKnown RBP15.26■□□□□ 0.03
PCF11-207ENST00000624931 KNG1P01042 644 aa15.26■□□□□ 0.03
PCF11-207ENST00000624931 SNRPEP62304 92 aaKnown RBP15.26■□□□□ 0.03
PCF11-207ENST00000624931 GGNBP1Q5YKI7 109 aa15.26■□□□□ 0.03
PCF11-207ENST00000624931 ZFP82Q8N141 532 aa15.26■□□□□ 0.03
PCF11-207ENST00000624931 LRTM2Q8N967 370 aa15.26■□□□□ 0.03
PCF11-207ENST00000624931 GALNT14Q96FL9 552 aa15.26■□□□□ 0.03
PCF11-207ENST00000624931 AKR1E2Q96JD6 320 aa15.26■□□□□ 0.03
PCF11-207ENST00000624931 SUCNR1Q9BXA5 334 aa15.26■□□□□ 0.03
PCF11-207ENST00000624931 ZDHHC11Q9H8X9 412 aa15.26■□□□□ 0.03
PCF11-207ENST00000624931 SEBOXQ9HB31 216 aaPredicted RBP15.26■□□□□ 0.03
PCF11-207ENST00000624931 DKK4Q9UBT3 224 aa15.26■□□□□ 0.03
PCF11-207ENST00000624931 K7ENP7 123 aa15.25■□□□□ 0.03
PCF11-207ENST00000624931 DHRS3O75911 302 aa15.25■□□□□ 0.03
PCF11-207ENST00000624931 DTYMKP23919 212 aa15.25■□□□□ 0.03
PCF11-207ENST00000624931 IL13RA2Q14627 380 aa15.25■□□□□ 0.03
PCF11-207ENST00000624931 INO80CQ6PI98 192 aaPredicted RBP15.25■□□□□ 0.03
PCF11-207ENST00000624931 RTN4RL2Q86UN3 420 aa15.25■□□□□ 0.03
PCF11-207ENST00000624931 SEMA6DQ8NFY4 1073 aa15.25■□□□□ 0.03
PCF11-207ENST00000624931 EXTL1Q92935 676 aa15.25■□□□□ 0.03
PCF11-207ENST00000624931 HSF4Q9ULV5 492 aa15.25■□□□□ 0.03
PCF11-207ENST00000624931 DNAJC13O75165 2243 aa15.25■□□□□ 0.03
PCF11-207ENST00000624931 TRGV5A0A0B4J1U4 118 aa15.24■□□□□ 0.03
PCF11-207ENST00000624931 MAS1LP35410 378 aa15.24■□□□□ 0.03
PCF11-207ENST00000624931 P2RY1P47900 373 aa15.24■□□□□ 0.03
PCF11-207ENST00000624931 TBR1Q16650 682 aa15.24■□□□□ 0.03
PCF11-207ENST00000624931 GUK1Q16774 197 aa15.24■□□□□ 0.03
PCF11-207ENST00000624931 ABLIM2Q6H8Q1 611 aa15.24■□□□□ 0.03
PCF11-207ENST00000624931 OR2A2Q6IF42 318 aa15.24■□□□□ 0.03
PCF11-207ENST00000624931 RBMXL3Q8N7X1 1067 aaKnown RBP15.24■□□□□ 0.03
PCF11-207ENST00000624931 GJC3Q8NFK1 279 aa15.24■□□□□ 0.03
PCF11-207ENST00000624931 OR1J1Q8NGS3 322 aa15.24■□□□□ 0.03
PCF11-207ENST00000624931 TCTEX1D2Q8WW35 142 aa15.24■□□□□ 0.03
PCF11-207ENST00000624931 TAAR6Q96RI8 345 aa15.24■□□□□ 0.03
PCF11-207ENST00000624931 CLCC1Q96S66 551 aa15.24■□□□□ 0.03
PCF11-207ENST00000624931 ZNF2Q9BSG1 426 aaPredicted RBP15.24■□□□□ 0.03
PCF11-207ENST00000624931 CHST5Q9GZS9 411 aa15.24■□□□□ 0.03
PCF11-207ENST00000624931 PRR13Q9NZ81 148 aa15.24■□□□□ 0.03
PCF11-207ENST00000624931 ZNF319Q9P2F9 582 aa15.24■□□□□ 0.03
PCF11-207ENST00000624931 NCOR2Q9Y618 2525 aa15.24■□□□□ 0.03
PCF11-207ENST00000624931 A0A1W2PP11 408 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 C7orf77A4D0Y5 90 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 DHRS7CA6NNS2 312 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 NPIPA2E9PIF3 369 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 NPIPA3F8WFD2 350 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 LINC01387J3KSC0 135 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 RER1O15258 196 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 SGCEO43556 437 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 QDPRP09417 244 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 OR8U9P0C7N5 309 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 IGFL3Q6UXB1 125 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 RNF144BQ7Z419 303 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 ZIC4Q8N9L1 334 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 OR8U1Q8NH10 309 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 ABHD3Q8WU67 409 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 SECTM1Q8WVN6 248 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 UNKLQ9H9P5 680 aaKnown RBP15.23■□□□□ 0.03
PCF11-207ENST00000624931 NECAP2Q9NVZ3 263 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms