RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 CA14Q9ULX7 337 aa12.26□□□□□ -0.45
LDB3-209ENST00000623056 GON4LQ3T8J9 2241 aa12.26□□□□□ -0.45
LDB3-209ENST00000623056 BRWD1Q9NSI6 2320 aa12.26□□□□□ -0.45
LDB3-209ENST00000623056 B4DEV8 164 aa12.26□□□□□ -0.45
LDB3-209ENST00000623056 ZNF732B4DXR9 585 aa12.26□□□□□ -0.45
LDB3-209ENST00000623056 C9J4A7 227 aa12.26□□□□□ -0.45
LDB3-209ENST00000623056 F5H5K5 113 aa12.26□□□□□ -0.45
LDB3-209ENST00000623056 ANGPTL7O43827 346 aa12.26□□□□□ -0.45
LDB3-209ENST00000623056 FOLR1P15328 257 aa12.26□□□□□ -0.45
LDB3-209ENST00000623056 TMEM252Q8N6L7 170 aa12.26□□□□□ -0.45
LDB3-209ENST00000623056 PLPP5Q8NEB5 264 aa12.26□□□□□ -0.45
LDB3-209ENST00000623056 OR5C1Q8NGR4 320 aa12.26□□□□□ -0.45
LDB3-209ENST00000623056 RBMXL1Q96E39 390 aaKnown RBP12.26□□□□□ -0.45
LDB3-209ENST00000623056 PLEKHF2Q9H8W4 249 aa12.26□□□□□ -0.45
LDB3-209ENST00000623056 PCDH15Q96QU1 1955 aa12.26□□□□□ -0.45
LDB3-209ENST00000623056 NCOA6Q14686 2063 aaPredicted RBP12.26□□□□□ -0.45
LDB3-209ENST00000623056 SHANK1Q9Y566 2161 aa12.25□□□□□ -0.45
LDB3-209ENST00000623056 FAM221AA4D161 298 aa12.25□□□□□ -0.45
LDB3-209ENST00000623056 ZNF814B7Z6K7 855 aa12.25□□□□□ -0.45
LDB3-209ENST00000623056 PROB1E7EW31 1015 aa12.25□□□□□ -0.45
LDB3-209ENST00000623056 H3BMH7 237 aa12.25□□□□□ -0.45
LDB3-209ENST00000623056 SSSCA1O60232 199 aa12.25□□□□□ -0.45
LDB3-209ENST00000623056 BTF3P20290 206 aaKnown RBP12.25□□□□□ -0.45
LDB3-209ENST00000623056 FUT3P21217 361 aa12.25□□□□□ -0.45
LDB3-209ENST00000623056 EPHA1P21709 976 aa12.25□□□□□ -0.45
LDB3-209ENST00000623056 FBLP22087 321 aaKnown RBP12.25□□□□□ -0.45
LDB3-209ENST00000623056 NKX2-1P43699 371 aaPredicted RBP12.25□□□□□ -0.45
LDB3-209ENST00000623056 SUMO3P55854 103 aaPredicted RBP12.25□□□□□ -0.45
LDB3-209ENST00000623056 RNF4P78317 190 aa12.25□□□□□ -0.45
LDB3-209ENST00000623056 RUNX1Q01196 453 aa12.25□□□□□ -0.45
LDB3-209ENST00000623056 CHAF1BQ13112 559 aa12.25□□□□□ -0.45
LDB3-209ENST00000623056 C20orf196Q8IYI0 205 aa12.25□□□□□ -0.45
LDB3-209ENST00000623056 CALHM2Q9HA72 323 aa12.25□□□□□ -0.45
LDB3-209ENST00000623056 LYRM2Q9NU23 88 aaPredicted RBP12.25□□□□□ -0.45
LDB3-209ENST00000623056 A0A087WZY1 265 aa12.25□□□□□ -0.45
LDB3-209ENST00000623056 A0A0U1RQV5 110 aa12.25□□□□□ -0.45
LDB3-209ENST00000623056 TCRBV21S2A2A0A5A6 115 aa12.25□□□□□ -0.45
LDB3-209ENST00000623056 CDS2O95674 445 aa12.25□□□□□ -0.45
LDB3-209ENST00000623056 CTSSP25774 331 aa12.25□□□□□ -0.45
LDB3-209ENST00000623056 CD200P41217 278 aa12.25□□□□□ -0.45
LDB3-209ENST00000623056 DYNLT3P51808 116 aa12.25□□□□□ -0.45
LDB3-209ENST00000623056 RND2P52198 227 aa12.25□□□□□ -0.45
LDB3-209ENST00000623056 RSPO4Q2I0M5 234 aaPredicted RBP12.25□□□□□ -0.45
LDB3-209ENST00000623056 BRICD5Q6PL45 260 aa12.25□□□□□ -0.45
LDB3-209ENST00000623056 OR6X1Q8NH79 312 aa12.25□□□□□ -0.45
LDB3-209ENST00000623056 THAP3Q8WTV1 239 aaPredicted RBP12.25□□□□□ -0.45
LDB3-209ENST00000623056 MOB3AQ96BX8 217 aa12.25□□□□□ -0.45
LDB3-209ENST00000623056 GNPNAT1Q96EK6 184 aaPredicted RBP12.25□□□□□ -0.45
LDB3-209ENST00000623056 MAGT1Q9H0U3 335 aa12.25□□□□□ -0.45
LDB3-209ENST00000623056 COLQQ9Y215 455 aaPredicted RBP12.25□□□□□ -0.45
LDB3-209ENST00000623056 TP53TG5Q9Y2B4 290 aa12.25□□□□□ -0.45
LDB3-209ENST00000623056 IGHV3-20A0A0C4DH32 117 aa12.24□□□□□ -0.45
LDB3-209ENST00000623056 LOC102723971A0A1B0GUV8 181 aa12.24□□□□□ -0.45
LDB3-209ENST00000623056 A0A1W2PNR3 127 aa12.24□□□□□ -0.45
LDB3-209ENST00000623056 A8MWP6 167 aa12.24□□□□□ -0.45
LDB3-209ENST00000623056 TGOLN2O43493 480 aa12.24□□□□□ -0.45
LDB3-209ENST00000623056 SPRY1O43609 319 aaPredicted RBP12.24□□□□□ -0.45
LDB3-209ENST00000623056 CST7O76096 145 aa12.24□□□□□ -0.45
LDB3-209ENST00000623056 CTHP32929 405 aa12.24□□□□□ -0.45
LDB3-209ENST00000623056 LTBRP36941 435 aa12.24□□□□□ -0.45
LDB3-209ENST00000623056 FASLGP48023 281 aa12.24□□□□□ -0.45
LDB3-209ENST00000623056 MTCP1P56278 107 aa12.24□□□□□ -0.45
LDB3-209ENST00000623056 FOXL2P58012 376 aa12.24□□□□□ -0.45
LDB3-209ENST00000623056 TLE4Q04727 773 aa12.24□□□□□ -0.45
LDB3-209ENST00000623056 JOSD1Q15040 202 aaPredicted RBP12.24□□□□□ -0.45
LDB3-209ENST00000623056 BEND4Q6ZU67 534 aa12.24□□□□□ -0.45
LDB3-209ENST00000623056 ODF3L1Q8IXM7 274 aa12.24□□□□□ -0.45
LDB3-209ENST00000623056 CCDC71LQ8N9Z2 235 aa12.24□□□□□ -0.45
LDB3-209ENST00000623056 OR10G4Q8NGN3 311 aa12.24□□□□□ -0.45
LDB3-209ENST00000623056 METTL9Q9H1A3 318 aa12.24□□□□□ -0.45
LDB3-209ENST00000623056 GPR173Q9NS66 373 aa12.24□□□□□ -0.45
LDB3-209ENST00000623056 PITPNC1Q9UKF7 332 aa12.24□□□□□ -0.45
LDB3-209ENST00000623056 TRIOO75962 3097 aa12.24□□□□□ -0.45
LDB3-209ENST00000623056 TRDCB7Z8K6 153 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 CLDN34H7C241 214 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 HBE1P02100 147 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 SNRPCP09234 159 aaKnown RBP12.23□□□□□ -0.45
LDB3-209ENST00000623056 GABRG2P18507 467 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 CEACAM6P40199 344 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 HIST3H3Q16695 136 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 TGIF2LXQ8IUE1 241 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 CMTM1Q8IZ96 169 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 POC1BQ8TC44 478 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 NEU1Q99519 415 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 TMEM242Q9NWH2 141 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 C3orf85A0A1B0GTC6 90 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 A0A1B0GU03 582 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 DVL1O14640 695 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 GEMIN2O14893 280 aaKnown RBP12.23□□□□□ -0.45
LDB3-209ENST00000623056 GZMBP10144 247 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 FGF7P21781 194 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 AADACP22760 399 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 UCP3P55916 312 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 RAB11AP62491 216 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 VAMP2P63027 116 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 FOXO1Q12778 655 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 USF2Q15853 346 aaPredicted RBP12.23□□□□□ -0.45
LDB3-209ENST00000623056 C1orf189Q5VU69 101 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 FAM90A2PQ658T7 463 aa12.23□□□□□ -0.45
LDB3-209ENST00000623056 SHISA6Q6ZSJ9 500 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms