RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 OR2J3O76001 311 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 DUS4LO95620 317 aaKnown RBP8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 HAND1O96004 215 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 PSG6Q00889 435 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 SSX7Q7RTT5 188 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 LSMEM1Q8N8F7 131 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 SMAD7O15105 426 aaKnown RBP8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 ADRA2AP08913 450 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 OR4E1P0C645 316 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 LIMS3P0CW19 117 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 LIMS4P0CW20 117 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 SNRPNP63162 240 aaKnown RBP8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 KIAA0040Q15053 153 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 SLC25A35Q3KQZ1 300 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 PLAC9Q5JTB6 97 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 FNDC7Q5VTL7 733 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 MDP1Q86V88 176 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 ZG16BQ96DA0 208 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 C2orf50Q96LR7 162 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 ADGRL4Q9HBW9 690 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 MSL2Q9HCI7 577 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 PCDHGA9Q9Y5G4 932 aaKnown RBP8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 ECM29Q5VYK3 1845 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 CACNA1CQ13936 2221 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 IGHV1-45A0A0A0MS14 117 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 H7BYZ3 331 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 OR13C7P0DN81 318 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 DCTDP32321 178 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 GLDNQ6ZMI3 551 aaPredicted RBP8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 BAP18Q8IXM2 172 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 SLC22A18ASQ8N1D0 253 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 DUSP18Q8NEJ0 188 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 NUP205Q92621 2012 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 CCL19Q99731 98 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 FAAP24Q9BTP7 215 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 RNF115Q9Y4L5 304 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 OPN1MWP04001 364 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 OPN1MW2P0DN77 364 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 OPN1MW3P0DN78 364 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 CD80P33681 288 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 ERVFRD-1P60508 538 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 ECSCRQ19T08 205 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 ZNF787Q6DD87 383 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 TMEM123Q8N131 208 aa8.63□□□□□ -1.03
CLTCL1-211ENST00000621271 OOEPA6NGQ2 149 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 B3GALNT1O75752 331 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 LIMK1P53667 647 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 RNF212Q495C1 297 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 TMEM88Q6PEY1 159 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 C9orf40Q8IXQ3 194 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 ARHGAP5-AS1Q96IT6 56 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 SLC25A22Q9H936 323 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 SLC25A10Q9UBX3 287 aaPredicted RBP8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 PLEKHB1Q9UF11 243 aaPredicted RBP8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 GAB2Q9UQC2 676 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 V9GYS6 101 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 IGKV3-7A0A075B6H7 116 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 UBE2L5PA0A1B0GUS4 154 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 DCTN6O00399 190 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 CDKN2AP42771 156 aaKnown RBP8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 LYZP61626 148 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 MMDQ15546 238 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 LINC00303Q3SY05 128 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 FAM27D1Q5T7N8 215 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 UQCC3Q6UW78 93 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 WDR61Q9GZS3 305 aaKnown RBP8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 RABAC1Q9UI14 185 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 TMEM210A6NLX4 147 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 BCL2L11O43521 198 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 WNT1P04628 370 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 HMGA2P52926 109 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 NUBP1P53384 320 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 WNT3P56703 355 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 PRSS12P56730 875 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 DGAT2L6Q6ZPD8 337 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 OR8D4Q8NGM9 314 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 OR1L4Q8NGR5 311 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 WNT2BQ93097 391 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 WDR89Q96FK6 387 aaPredicted RBP8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 ZNF275Q9NSD4 429 aaPredicted RBP8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 TMEM38BQ9NVV0 291 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 KLK11Q9UBX7 282 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 FOXD3Q9UJU5 478 aaPredicted RBP8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 CABIN1Q9Y6J0 2220 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 J3QT63 122 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 FOXS1O43638 330 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 NME2P1O60361 137 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 HTN1P15515 57 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 HIST1H1DP16402 221 aaKnown RBP8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 VDAC1P21796 283 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 ENDOGQ14249 297 aaKnown RBP8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 ZNF596Q8TC21 504 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 DERL3Q96Q80 235 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 SCNM1Q9BWG6 230 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 TGIF2Q9GZN2 237 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 CTDSP1Q9GZU7 261 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 UQCC1Q9NVA1 299 aa8.62□□□□□ -1.03
CLTCL1-211ENST00000621271 LSM2Q9Y333 95 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms