RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 FAM3AP98173 230 aa18.38■□□□□ 0.53
SGMS1-210ENST00000619438 TESK1Q15569 626 aa18.38■□□□□ 0.53
SGMS1-210ENST00000619438 MICBQ29980 383 aa18.38■□□□□ 0.53
SGMS1-210ENST00000619438 SLC22A25Q6T423 547 aa18.38■□□□□ 0.53
SGMS1-210ENST00000619438 TERB2Q8NHR7 220 aa18.38■□□□□ 0.53
SGMS1-210ENST00000619438 FBXW5Q969U6 566 aa18.38■□□□□ 0.53
SGMS1-210ENST00000619438 Q96M66 194 aa18.38■□□□□ 0.53
SGMS1-210ENST00000619438 METTL9Q9H1A3 318 aa18.38■□□□□ 0.53
SGMS1-210ENST00000619438 OBP2BQ9NPH6 170 aa18.38■□□□□ 0.53
SGMS1-210ENST00000619438 ROS1P08922 2347 aa18.38■□□□□ 0.53
SGMS1-210ENST00000619438 ANKRD34BA5PLL1 514 aa18.38■□□□□ 0.53
SGMS1-210ENST00000619438 OR2AT4A6NND4 320 aa18.38■□□□□ 0.53
SGMS1-210ENST00000619438 MPC2O95563 127 aa18.38■□□□□ 0.53
SGMS1-210ENST00000619438 IFNA7P01567 189 aa18.38■□□□□ 0.53
SGMS1-210ENST00000619438 SERPINA2P20848 420 aa18.38■□□□□ 0.53
SGMS1-210ENST00000619438 CD40P25942 277 aa18.38■□□□□ 0.53
SGMS1-210ENST00000619438 RBP2P50120 134 aa18.38■□□□□ 0.53
SGMS1-210ENST00000619438 TAS2R31P59538 309 aa18.38■□□□□ 0.53
SGMS1-210ENST00000619438 SEC61A1P61619 476 aaKnown RBP18.38■□□□□ 0.53
SGMS1-210ENST00000619438 GRK1Q15835 563 aa18.38■□□□□ 0.53
SGMS1-210ENST00000619438 LY6G6FQ5SQ64 297 aa18.38■□□□□ 0.53
SGMS1-210ENST00000619438 DCAF12L2Q5VW00 463 aa18.38■□□□□ 0.53
SGMS1-210ENST00000619438 ZNF611Q8N823 705 aa18.38■□□□□ 0.53
SGMS1-210ENST00000619438 BOD1Q96IK1 185 aa18.38■□□□□ 0.53
SGMS1-210ENST00000619438 BEX4Q9NWD9 120 aaPredicted RBP18.38■□□□□ 0.53
SGMS1-210ENST00000619438 F8P00451 2351 aa18.37■□□□□ 0.53
SGMS1-210ENST00000619438 M0R233 179 aa18.37■□□□□ 0.53
SGMS1-210ENST00000619438 SIX6O95475 246 aa18.37■□□□□ 0.53
SGMS1-210ENST00000619438 CD8AP01732 235 aa18.37■□□□□ 0.53
SGMS1-210ENST00000619438 PMP2P02689 132 aa18.37■□□□□ 0.53
SGMS1-210ENST00000619438 HOXB1P14653 301 aaPredicted RBP18.37■□□□□ 0.53
SGMS1-210ENST00000619438 CXCL2P19875 107 aa18.37■□□□□ 0.53
SGMS1-210ENST00000619438 TAS2R46P59540 309 aa18.37■□□□□ 0.53
SGMS1-210ENST00000619438 GMFBP60983 142 aa18.37■□□□□ 0.53
SGMS1-210ENST00000619438 ARFRP1Q13795 201 aa18.37■□□□□ 0.53
SGMS1-210ENST00000619438 ZNF672Q499Z4 452 aaPredicted RBP18.37■□□□□ 0.53
SGMS1-210ENST00000619438 C11orf88Q6PI97 169 aa18.37■□□□□ 0.53
SGMS1-210ENST00000619438 CPEB3Q8NE35 698 aaKnown RBP18.37■□□□□ 0.53
SGMS1-210ENST00000619438 OR5M8Q8NGP6 311 aa18.37■□□□□ 0.53
SGMS1-210ENST00000619438 LILRB1Q8NHL6 650 aaPredicted RBP18.37■□□□□ 0.53
SGMS1-210ENST00000619438 MITD1Q8WV92 249 aa18.37■□□□□ 0.53
SGMS1-210ENST00000619438 NEUROG1Q92886 237 aa18.37■□□□□ 0.53
SGMS1-210ENST00000619438 WDR89Q96FK6 387 aaPredicted RBP18.37■□□□□ 0.53
SGMS1-210ENST00000619438 CISD1Q9NZ45 108 aaKnown RBP18.37■□□□□ 0.53
SGMS1-210ENST00000619438 IL36GQ9NZH8 169 aa18.37■□□□□ 0.53
SGMS1-210ENST00000619438 C9orf170A2RU37 121 aa18.36■□□□□ 0.53
SGMS1-210ENST00000619438 L7N2F9 121 aa18.36■□□□□ 0.53
SGMS1-210ENST00000619438 SMPD2O60906 423 aa18.36■□□□□ 0.53
SGMS1-210ENST00000619438 NRASP01111 189 aa18.36■□□□□ 0.53
SGMS1-210ENST00000619438 HLA-AP01891 365 aaKnown RBP18.36■□□□□ 0.53
SGMS1-210ENST00000619438 CD34P28906 385 aa18.36■□□□□ 0.53
SGMS1-210ENST00000619438 FUT6P51993 359 aa18.36■□□□□ 0.53
SGMS1-210ENST00000619438 ZNF92Q03936 586 aa18.36■□□□□ 0.53
SGMS1-210ENST00000619438 OPCMLQ14982 345 aa18.36■□□□□ 0.53
SGMS1-210ENST00000619438 TMEM171Q8WVE6 324 aa18.36■□□□□ 0.53
SGMS1-210ENST00000619438 ELMOD3Q96FG2 381 aa18.36■□□□□ 0.53
SGMS1-210ENST00000619438 DPCDQ9BVM2 203 aaPredicted RBP18.36■□□□□ 0.53
SGMS1-210ENST00000619438 HSF4Q9ULV5 492 aa18.36■□□□□ 0.53
SGMS1-210ENST00000619438 LAMP3Q9UQV4 416 aa18.36■□□□□ 0.53
SGMS1-210ENST00000619438 ZNF816-ZNF321PA0A0X1KG74 233 aa18.35■□□□□ 0.53
SGMS1-210ENST00000619438 TMEM225BP0DP42 221 aa18.35■□□□□ 0.53
SGMS1-210ENST00000619438 DMRTC1Q5HYR2 192 aa18.35■□□□□ 0.53
SGMS1-210ENST00000619438 SPNS3Q6ZMD2 512 aa18.35■□□□□ 0.53
SGMS1-210ENST00000619438 PXT1Q8NFP0 134 aa18.35■□□□□ 0.53
SGMS1-210ENST00000619438 OR5H2Q8NGV7 314 aa18.35■□□□□ 0.53
SGMS1-210ENST00000619438 OR10K1Q8NGX5 313 aa18.35■□□□□ 0.53
SGMS1-210ENST00000619438 MRPS24Q96EL2 167 aaKnown RBP18.35■□□□□ 0.53
SGMS1-210ENST00000619438 BORCS8Q96FH0 119 aa18.35■□□□□ 0.53
SGMS1-210ENST00000619438 POM121Q96HA1 1249 aa18.35■□□□□ 0.53
SGMS1-210ENST00000619438 SCGB3A2Q96PL1 93 aa18.35■□□□□ 0.53
SGMS1-210ENST00000619438 IGKV1-27A0A075B6S5 117 aa18.34■□□□□ 0.53
SGMS1-210ENST00000619438 PPP1R1AQ13522 171 aa18.34■□□□□ 0.53
SGMS1-210ENST00000619438 C17orf107Q6ZR85 190 aa18.34■□□□□ 0.53
SGMS1-210ENST00000619438 LHFPL1Q86WI0 220 aa18.34■□□□□ 0.53
SGMS1-210ENST00000619438 TMEM17Q86X19 198 aa18.34■□□□□ 0.53
SGMS1-210ENST00000619438 CCDC36Q8IYA8 594 aa18.34■□□□□ 0.53
SGMS1-210ENST00000619438 TMEM185AQ8NFB2 350 aa18.34■□□□□ 0.53
SGMS1-210ENST00000619438 CXXC4Q9H2H0 198 aa18.34■□□□□ 0.53
SGMS1-210ENST00000619438 FN3KRPQ9HA64 309 aa18.34■□□□□ 0.53
SGMS1-210ENST00000619438 LINC00862A6NCI5 91 aa18.34■□□□□ 0.53
SGMS1-210ENST00000619438 RFPL4AA6NLU0 287 aa18.34■□□□□ 0.53
SGMS1-210ENST00000619438 SHISA9B4DS77 424 aa18.34■□□□□ 0.53
SGMS1-210ENST00000619438 RFPL4AL1F8VTS6 287 aa18.34■□□□□ 0.53
SGMS1-210ENST00000619438 DUS4LO95620 317 aaKnown RBP18.34■□□□□ 0.53
SGMS1-210ENST00000619438 AMY2BP19961 511 aa18.34■□□□□ 0.53
SGMS1-210ENST00000619438 ARR3P36575 388 aa18.34■□□□□ 0.53
SGMS1-210ENST00000619438 FGL1Q08830 312 aa18.34■□□□□ 0.53
SGMS1-210ENST00000619438 LIN54Q6MZP7 749 aa18.34■□□□□ 0.53
SGMS1-210ENST00000619438 DPPA2Q7Z7J5 298 aa18.34■□□□□ 0.53
SGMS1-210ENST00000619438 PEG10Q86TG7 708 aaKnown RBP18.34■□□□□ 0.53
SGMS1-210ENST00000619438 PHB2Q99623 299 aa18.34■□□□□ 0.53
SGMS1-210ENST00000619438 ELL3Q9HB65 397 aaPredicted RBP18.34■□□□□ 0.53
SGMS1-210ENST00000619438 UBQLN2Q9UHD9 624 aa18.34■□□□□ 0.53
SGMS1-210ENST00000619438 GPR132Q9UNW8 380 aa18.34■□□□□ 0.53
SGMS1-210ENST00000619438 SLC7A11Q9UPY5 501 aa18.34■□□□□ 0.53
SGMS1-210ENST00000619438 NOP16Q9Y3C1 178 aaKnown RBP18.34■□□□□ 0.53
SGMS1-210ENST00000619438 PRRC2AP48634 2157 aaKnown RBP18.34■□□□□ 0.53
SGMS1-210ENST00000619438 FAM230AA0A1W2PPH8 454 aa18.33■□□□□ 0.52
SGMS1-210ENST00000619438 ATP1B3P54709 279 aa18.33■□□□□ 0.52
SGMS1-210ENST00000619438 IL13RA1P78552 427 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms