RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	C3AR1	Q16581	482 aa		12.04	□□□□□ -0.48
CACNA1C-231	ENST00000616390	BAP18	Q8IXM2	172 aa		12.04	□□□□□ -0.48
CACNA1C-231	ENST00000616390	CPT1C	Q8TCG5	803 aa		12.04	□□□□□ -0.48
CACNA1C-231	ENST00000616390	PFDN5	Q99471	154 aa		12.04	□□□□□ -0.48
CACNA1C-231	ENST00000616390	ANXA10	Q9UJ72	324 aa		12.04	□□□□□ -0.48
CACNA1C-231	ENST00000616390	MRPL33	O75394	65 aa	Known RBP	12.03	□□□□□ -0.48
CACNA1C-231	ENST00000616390	FOXG1	P55316	489 aa	Predicted RBP	12.03	□□□□□ -0.48
CACNA1C-231	ENST00000616390	FAM3A	P98173	230 aa		12.03	□□□□□ -0.48
CACNA1C-231	ENST00000616390	MARS2	Q96GW9	593 aa	Known RBP	12.03	□□□□□ -0.48
CACNA1C-231	ENST00000616390	C2orf50	Q96LR7	162 aa		12.03	□□□□□ -0.48
CACNA1C-231	ENST00000616390	FAM212B	Q9NTI7	297 aa	Predicted RBP	12.03	□□□□□ -0.48
CACNA1C-231	ENST00000616390	FOXJ2	Q9P0K8	574 aa		12.03	□□□□□ -0.48
CACNA1C-231	ENST00000616390	HSPB6	O14558	160 aa		12.03	□□□□□ -0.48
CACNA1C-231	ENST00000616390	EIF3G	O75821	320 aa	Known RBP eCLIP	12.03	□□□□□ -0.48
CACNA1C-231	ENST00000616390	DIRAS3	O95661	229 aa		12.03	□□□□□ -0.48
CACNA1C-231	ENST00000616390	ITGA3	P26006	1051 aa		12.03	□□□□□ -0.48
CACNA1C-231	ENST00000616390	SLC22A25	Q6T423	547 aa		12.03	□□□□□ -0.48
CACNA1C-231	ENST00000616390	CALHM1	Q8IU99	346 aa		12.03	□□□□□ -0.48
CACNA1C-231	ENST00000616390	SGPP2	Q8IWX5	399 aa		12.03	□□□□□ -0.48
CACNA1C-231	ENST00000616390	OR10AD1	Q8NGE0	317 aa		12.03	□□□□□ -0.48
CACNA1C-231	ENST00000616390	PSMF1	Q92530	271 aa		12.03	□□□□□ -0.48
CACNA1C-231	ENST00000616390	ADAT1	Q9BUB4	502 aa	Known RBP	12.03	□□□□□ -0.48
CACNA1C-231	ENST00000616390	RNF24	Q9Y225	148 aa		12.03	□□□□□ -0.48
CACNA1C-231	ENST00000616390	C3orf80	F5H4A9	247 aa		12.02	□□□□□ -0.48
CACNA1C-231	ENST00000616390	OR7C1	O76099	320 aa	Predicted RBP	12.02	□□□□□ -0.48
CACNA1C-231	ENST00000616390	HLA-H	P01893	362 aa		12.02	□□□□□ -0.48
CACNA1C-231	ENST00000616390	NPBWR2	P48146	333 aa		12.02	□□□□□ -0.48
CACNA1C-231	ENST00000616390	NOVA1	P51513	510 aa	Known RBP	12.02	□□□□□ -0.48
CACNA1C-231	ENST00000616390	PIGP	P57054	158 aa		12.02	□□□□□ -0.48
CACNA1C-231	ENST00000616390	SRSF3	P84103	164 aa	Known RBP	12.02	□□□□□ -0.48
CACNA1C-231	ENST00000616390	OR2A2	Q6IF42	318 aa		12.02	□□□□□ -0.48
CACNA1C-231	ENST00000616390	PRRG4	Q9BZD6	226 aa		12.02	□□□□□ -0.48
CACNA1C-231	ENST00000616390	PARP12	Q9H0J9	701 aa	Known RBP	12.02	□□□□□ -0.48
CACNA1C-231	ENST00000616390	UNKL	Q9H9P5	680 aa	Known RBP	12.02	□□□□□ -0.48
CACNA1C-231	ENST00000616390	ZNF629	Q9UEG4	869 aa	Predicted RBP	12.02	□□□□□ -0.48
CACNA1C-231	ENST00000616390	CFAP47	Q6ZTR5	3102 aa		12.02	□□□□□ -0.48
CACNA1C-231	ENST00000616390	C19orf67	A6NJJ6	358 aa		12.02	□□□□□ -0.49
CACNA1C-231	ENST00000616390	ZNF705E	A8MWA4	302 aa	Predicted RBP	12.02	□□□□□ -0.49
CACNA1C-231	ENST00000616390	FBXO24	O75426	580 aa		12.02	□□□□□ -0.49
CACNA1C-231	ENST00000616390	IGHE	P01854	428 aa		12.02	□□□□□ -0.49
CACNA1C-231	ENST00000616390	RCC1	P18754	421 aa	Predicted RBP	12.02	□□□□□ -0.49
CACNA1C-231	ENST00000616390	RBM39	Q14498	530 aa	Known RBP	12.02	□□□□□ -0.49
CACNA1C-231	ENST00000616390	ABCA11P	Q4W5N1	156 aa		12.02	□□□□□ -0.49
CACNA1C-231	ENST00000616390	PRSS54	Q6PEW0	395 aa		12.02	□□□□□ -0.49
CACNA1C-231	ENST00000616390	TUSC5	Q8IXB3	177 aa		12.02	□□□□□ -0.49
CACNA1C-231	ENST00000616390	MRPL24	Q96A35	216 aa	Known RBP	12.02	□□□□□ -0.49
CACNA1C-231	ENST00000616390	SPSB1	Q96BD6	273 aa		12.02	□□□□□ -0.49
CACNA1C-231	ENST00000616390	HRH4	Q9H3N8	390 aa		12.02	□□□□□ -0.49
CACNA1C-231	ENST00000616390	ZNF442	Q9H7R0	627 aa		12.02	□□□□□ -0.49
CACNA1C-231	ENST00000616390	CYTL1	Q9NRR1	136 aa		12.02	□□□□□ -0.49
CACNA1C-231	ENST00000616390	SLC7A10	Q9NS82	523 aa		12.02	□□□□□ -0.49
CACNA1C-231	ENST00000616390	SLC7A11	Q9UPY5	501 aa		12.02	□□□□□ -0.49
CACNA1C-231	ENST00000616390	ESPL1	Q14674	2120 aa		12.02	□□□□□ -0.49
CACNA1C-231	ENST00000616390	OR6C6	A6NF89	314 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	SERPINA7	P05543	415 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	SMCO1	Q147U7	214 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	OR2B11	Q5JQS5	317 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	SLC25A26	Q70HW3	274 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	OSR2	Q8N2R0	312 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	OR5L1	Q8NGL2	311 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	ADGRG7	Q96K78	797 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	C1orf123	Q9NWV4	160 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390		R4GN57	208 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	CEACAM18	A8MTB9	384 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390		B4E171	279 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	C9orf172	C9J069	976 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	FARS2	O95363	451 aa	Known RBP	12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	FCGR3A	P08637	254 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	FCGR2C	P31995	323 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	MPL	P40238	635 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	MAGEA5	P43359	124 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	ARF1	P84077	181 aa	Known RBP	12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	PLEKHN1	Q494U1	663 aa	Predicted RBP	12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	PEAR1	Q5VY43	1037 aa	Predicted RBP	12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	RPL7L1	Q6DKI1	246 aa	Known RBP	12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	FNDC9	Q8TBE3	224 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	PHYHIPL	Q96FC7	376 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	CPNE2	Q96FN4	548 aa	Predicted RBP	12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	C5orf49	A4QMS7	147 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	AGPAT2	O15120	278 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	F12	P00748	615 aa	Predicted RBP	12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	S100A8	P05109	93 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	CD79A	P11912	226 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	ACP1	P24666	158 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	PDZK1IP1	Q13113	114 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	ABHD17B	Q5VST6	288 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	LHFPL2	Q6ZUX7	228 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	VASH2	Q86V25	355 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	POC1A	Q8NBT0	407 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	OR11L1	Q8NGX0	322 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	C10orf35	Q96D05	121 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	STRADB	Q9C0K7	418 aa		12.01	□□□□□ -0.49
CACNA1C-231	ENST00000616390	hCG_38984	A0A1B0GV85	526 aa		12	□□□□□ -0.49
CACNA1C-231	ENST00000616390	FAM74A7	A6NL05	159 aa		12	□□□□□ -0.49
CACNA1C-231	ENST00000616390	GPR31	O00270	319 aa		12	□□□□□ -0.49
CACNA1C-231	ENST00000616390	LY86	O95711	162 aa		12	□□□□□ -0.49
CACNA1C-231	ENST00000616390	OR5AC1	P0C628	307 aa		12	□□□□□ -0.49
CACNA1C-231	ENST00000616390	DUSP1	P28562	367 aa		12	□□□□□ -0.49
CACNA1C-231	ENST00000616390	ARL6IP1	Q15041	203 aa		12	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms