RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 A0A1W2PR80 420 aa11.72□□□□□ -0.53
PCDHA11-202ENST00000616325 SCGNO76038 276 aa11.72□□□□□ -0.53
PCDHA11-202ENST00000616325 OR4A8P0C604 315 aa11.72□□□□□ -0.53
PCDHA11-202ENST00000616325 GUCA1AP43080 201 aaPredicted RBP11.72□□□□□ -0.53
PCDHA11-202ENST00000616325 GLIPR1P48060 266 aa11.72□□□□□ -0.53
PCDHA11-202ENST00000616325 MLF1P58340 268 aa11.72□□□□□ -0.53
PCDHA11-202ENST00000616325 MRPS34P82930 218 aaKnown RBP11.72□□□□□ -0.53
PCDHA11-202ENST00000616325 QRFPP83859 136 aa11.72□□□□□ -0.53
PCDHA11-202ENST00000616325 HIKESHIQ53FT3 197 aa11.72□□□□□ -0.53
PCDHA11-202ENST00000616325 LYPD6BQ8NI32 183 aa11.72□□□□□ -0.53
PCDHA11-202ENST00000616325 DTD1Q8TEA8 209 aa11.72□□□□□ -0.53
PCDHA11-202ENST00000616325 SNHG12Q9BXW3 62 aa11.72□□□□□ -0.53
PCDHA11-202ENST00000616325 UCK1Q9HA47 277 aa11.72□□□□□ -0.53
PCDHA11-202ENST00000616325 TMED3Q9Y3Q3 217 aa11.72□□□□□ -0.53
PCDHA11-202ENST00000616325 THADAQ6YHU6 1953 aa11.72□□□□□ -0.53
PCDHA11-202ENST00000616325 HSPB2A8KAH6 182 aa11.72□□□□□ -0.53
PCDHA11-202ENST00000616325 HSPA12AO43301 675 aa11.72□□□□□ -0.53
PCDHA11-202ENST00000616325 DXOO77932 396 aaKnown RBP11.72□□□□□ -0.53
PCDHA11-202ENST00000616325 AMBPP02760 352 aa11.72□□□□□ -0.53
PCDHA11-202ENST00000616325 DBHP09172 617 aa11.72□□□□□ -0.53
PCDHA11-202ENST00000616325 HSPB2Q16082 182 aa11.72□□□□□ -0.53
PCDHA11-202ENST00000616325 OR8B12Q8NGG6 310 aa11.72□□□□□ -0.53
PCDHA11-202ENST00000616325 OR14L1PQ8NHC6 308 aa11.72□□□□□ -0.53
PCDHA11-202ENST00000616325 GOLT1BQ9Y3E0 138 aa11.72□□□□□ -0.53
PCDHA11-202ENST00000616325 DFFBO76075 338 aa11.71□□□□□ -0.53
PCDHA11-202ENST00000616325 FCGR2AP12318 317 aa11.71□□□□□ -0.53
PCDHA11-202ENST00000616325 ZNF41P51814 821 aaPredicted RBP11.71□□□□□ -0.53
PCDHA11-202ENST00000616325 TAF9Q16594 264 aa11.71□□□□□ -0.53
PCDHA11-202ENST00000616325 C5orf24Q7Z6I8 188 aa11.71□□□□□ -0.53
PCDHA11-202ENST00000616325 OR5C1Q8NGR4 320 aa11.71□□□□□ -0.53
PCDHA11-202ENST00000616325 HIST1H2AAQ96QV6 131 aa11.71□□□□□ -0.53
PCDHA11-202ENST00000616325 FAAP24Q9BTP7 215 aa11.71□□□□□ -0.53
PCDHA11-202ENST00000616325 CLDN34H7C241 214 aa11.71□□□□□ -0.54
PCDHA11-202ENST00000616325 HPNP05981 417 aa11.71□□□□□ -0.54
PCDHA11-202ENST00000616325 ZNF728P0DKX0 622 aa11.71□□□□□ -0.54
PCDHA11-202ENST00000616325 DAP3P51398 398 aaKnown RBP11.71□□□□□ -0.54
PCDHA11-202ENST00000616325 IGLV3-21P80748 117 aaPredicted RBP11.71□□□□□ -0.54
PCDHA11-202ENST00000616325 ARHGEF39Q8N4T4 335 aa11.71□□□□□ -0.54
PCDHA11-202ENST00000616325 TMEM234Q8WY98 164 aa11.71□□□□□ -0.54
PCDHA11-202ENST00000616325 GINS3Q9BRX5 216 aa11.71□□□□□ -0.54
PCDHA11-202ENST00000616325 FGF21Q9NSA1 209 aa11.71□□□□□ -0.54
PCDHA11-202ENST00000616325 SRPK3Q9UPE1 567 aa11.71□□□□□ -0.54
PCDHA11-202ENST00000616325 ZNF407Q9C0G0 2248 aa11.71□□□□□ -0.54
PCDHA11-202ENST00000616325 TRBV11-1A0A0K0K1C0 115 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 CD33P20138 364 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 RAB4BP61018 213 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 EWSR1Q01844 656 aaKnown RBP eCLIP11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 MYBPHQ13203 477 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 UEVLDQ8IX04 471 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 LGI3Q8N145 548 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 TSTD1Q8NFU3 115 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 ASB10Q8WXI3 467 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 RBM24Q9BX46 236 aaKnown RBP11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 SERINC1Q9NRX5 453 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 PITPNC1Q9UKF7 332 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 NCOA6Q14686 2063 aaPredicted RBP11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 A0A1W2PPQ1 181 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 HMGB3O15347 200 aaKnown RBP11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 IGKV3-11P04433 115 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 CD55P08174 381 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 NPSP0C0P6 89 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 CLN3Q13286 438 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 JOSD1Q15040 202 aaPredicted RBP11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 DMRTA1Q5VZB9 504 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 CST9LP1Q5W188 147 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 OR10S1Q8NGN2 331 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 LIPHQ8WWY8 451 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 METTL9Q9H1A3 318 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 ZNF581Q9P0T4 197 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 HS3ST3A1Q9Y663 406 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 M0R143 59 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 DRD1P21728 446 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 CFPP27918 469 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 GABREP78334 506 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 PAX5Q02548 391 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 COL10A1Q03692 680 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 P2RY6Q15077 328 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 BTNL3Q6UXE8 466 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 OR4X1Q8NH49 305 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 FAM206AQ9NX38 181 aa11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 MCTS1Q9ULC4 181 aaKnown RBP11.7□□□□□ -0.54
PCDHA11-202ENST00000616325 CEBPZOSA8MTT3 80 aa11.69□□□□□ -0.54
PCDHA11-202ENST00000616325 BCAT2O15382 392 aaPredicted RBP11.69□□□□□ -0.54
PCDHA11-202ENST00000616325 SPRY1O43609 319 aaPredicted RBP11.69□□□□□ -0.54
PCDHA11-202ENST00000616325 PNLIPP16233 465 aa11.69□□□□□ -0.54
PCDHA11-202ENST00000616325 ZNF43P17038 809 aa11.69□□□□□ -0.54
PCDHA11-202ENST00000616325 DBX2Q6ZNG2 339 aa11.69□□□□□ -0.54
PCDHA11-202ENST00000616325 OR1N1Q8NGS0 311 aa11.69□□□□□ -0.54
PCDHA11-202ENST00000616325 OR2AE1Q8NHA4 323 aa11.69□□□□□ -0.54
PCDHA11-202ENST00000616325 YPEL4Q96NS1 127 aa11.69□□□□□ -0.54
PCDHA11-202ENST00000616325 MUC3AQ02505 3323 aa11.69□□□□□ -0.54
PCDHA11-202ENST00000616325 TSPAN2O60636 221 aa11.69□□□□□ -0.54
PCDHA11-202ENST00000616325 ICAM4Q14773 271 aa11.69□□□□□ -0.54
PCDHA11-202ENST00000616325 LBHQ53QV2 105 aaPredicted RBP11.69□□□□□ -0.54
PCDHA11-202ENST00000616325 OR2C3Q8N628 320 aa11.69□□□□□ -0.54
PCDHA11-202ENST00000616325 PECRQ9BY49 303 aa11.69□□□□□ -0.54
PCDHA11-202ENST00000616325 GPR173Q9NS66 373 aa11.69□□□□□ -0.54
PCDHA11-202ENST00000616325 NBEAQ8NFP9 2946 aa11.69□□□□□ -0.54
PCDHA11-202ENST00000616325 A0A1W2PPC4 97 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms