RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 M0R1W7 72 aa13.71□□□□□ -0.22
CBWD3-211ENST00000615061 OR2H2O95918 312 aa13.71□□□□□ -0.22
CBWD3-211ENST00000615061 ALDOBP05062 364 aa13.71□□□□□ -0.22
CBWD3-211ENST00000615061 CD1AP06126 327 aa13.71□□□□□ -0.22
CBWD3-211ENST00000615061 BDKRB2P30411 391 aa13.71□□□□□ -0.22
CBWD3-211ENST00000615061 ZNF93P35789 620 aaPredicted RBP13.71□□□□□ -0.22
CBWD3-211ENST00000615061 TGFBR2P37173 567 aa13.71□□□□□ -0.22
CBWD3-211ENST00000615061 SPIN3Q5JUX0 258 aa13.71□□□□□ -0.22
CBWD3-211ENST00000615061 C11orf42Q8N5U0 333 aa13.71□□□□□ -0.22
CBWD3-211ENST00000615061 OR4S1Q8NGB4 309 aa13.71□□□□□ -0.22
CBWD3-211ENST00000615061 ZNF184Q99676 751 aaPredicted RBP13.71□□□□□ -0.22
CBWD3-211ENST00000615061 DNAJC9-AS1A6NH13 148 aa13.7□□□□□ -0.22
CBWD3-211ENST00000615061 MAS1P04201 325 aa13.7□□□□□ -0.22
CBWD3-211ENST00000615061 OR3A1P47881 315 aa13.7□□□□□ -0.22
CBWD3-211ENST00000615061 SCN1BQ07699 218 aa13.7□□□□□ -0.22
CBWD3-211ENST00000615061 BAMBIQ13145 260 aa13.7□□□□□ -0.22
CBWD3-211ENST00000615061 GRK1Q15835 563 aa13.7□□□□□ -0.22
CBWD3-211ENST00000615061 FAM27D1Q5T7N8 215 aa13.7□□□□□ -0.22
CBWD3-211ENST00000615061 GDPD3Q7L5L3 318 aa13.7□□□□□ -0.22
CBWD3-211ENST00000615061 TCF23Q7RTU1 214 aa13.7□□□□□ -0.22
CBWD3-211ENST00000615061 PXT1Q8NFP0 134 aa13.7□□□□□ -0.22
CBWD3-211ENST00000615061 NR1H4Q96RI1 486 aaPredicted RBP13.7□□□□□ -0.22
CBWD3-211ENST00000615061 JMJD8Q96S16 334 aa13.7□□□□□ -0.22
CBWD3-211ENST00000615061 TMED9Q9BVK6 235 aa13.7□□□□□ -0.22
CBWD3-211ENST00000615061 METTL8Q9H825 291 aaKnown RBP13.7□□□□□ -0.22
CBWD3-211ENST00000615061 EXOSC4Q9NPD3 245 aaKnown RBP13.7□□□□□ -0.22
CBWD3-211ENST00000615061 NOX4Q9NPH5 578 aa13.7□□□□□ -0.22
CBWD3-211ENST00000615061 A0A0U1RQK1 487 aa13.69□□□□□ -0.22
CBWD3-211ENST00000615061 GPX5O75715 221 aa13.69□□□□□ -0.22
CBWD3-211ENST00000615061 HSMCR30P0CW71 290 aa13.69□□□□□ -0.22
CBWD3-211ENST00000615061 ZNF44P15621 663 aa13.69□□□□□ -0.22
CBWD3-211ENST00000615061 FSTP19883 344 aa13.69□□□□□ -0.22
CBWD3-211ENST00000615061 PTGFRP43088 359 aa13.69□□□□□ -0.22
CBWD3-211ENST00000615061 UBA52P62987 128 aaKnown RBP13.69□□□□□ -0.22
CBWD3-211ENST00000615061 LIPKQ5VXJ0 399 aa13.69□□□□□ -0.22
CBWD3-211ENST00000615061 Q6P435 159 aa13.69□□□□□ -0.22
CBWD3-211ENST00000615061 C1orf122Q6ZSJ8 110 aa13.69□□□□□ -0.22
CBWD3-211ENST00000615061 PRSS48Q7RTY5 328 aa13.69□□□□□ -0.22
CBWD3-211ENST00000615061 CPNE2Q96FN4 548 aaPredicted RBP13.69□□□□□ -0.22
CBWD3-211ENST00000615061 SEBOXQ9HB31 216 aaPredicted RBP13.69□□□□□ -0.22
CBWD3-211ENST00000615061 CKLFQ9UBR5 152 aa13.69□□□□□ -0.22
CBWD3-211ENST00000615061 SH2D1BO14796 132 aa13.68□□□□□ -0.22
CBWD3-211ENST00000615061 PRTN3P24158 256 aa13.68□□□□□ -0.22
CBWD3-211ENST00000615061 EEF1B2P24534 225 aaKnown RBP13.68□□□□□ -0.22
CBWD3-211ENST00000615061 GP2P55259 537 aaKnown RBP13.68□□□□□ -0.22
CBWD3-211ENST00000615061 BPIFB3P59826 476 aa13.68□□□□□ -0.22
CBWD3-211ENST00000615061 RSU1Q15404 277 aa13.68□□□□□ -0.22
CBWD3-211ENST00000615061 PIGYQ3MUY2 71 aa13.68□□□□□ -0.22
CBWD3-211ENST00000615061 RBM48Q5RL73 367 aaKnown RBP13.68□□□□□ -0.22
CBWD3-211ENST00000615061 HCP5Q6MZN7 132 aa13.68□□□□□ -0.22
CBWD3-211ENST00000615061 METAP1DQ6UB28 335 aaPredicted RBP13.68□□□□□ -0.22
CBWD3-211ENST00000615061 ASCL4Q6XD76 172 aa13.68□□□□□ -0.22
CBWD3-211ENST00000615061 PPA2Q9H2U2 334 aa13.68□□□□□ -0.22
CBWD3-211ENST00000615061 UNKLQ9H9P5 680 aaKnown RBP13.68□□□□□ -0.22
CBWD3-211ENST00000615061 ZNF581Q9P0T4 197 aa13.68□□□□□ -0.22
CBWD3-211ENST00000615061 A0A0G2JK05 382 aa13.68□□□□□ -0.22
CBWD3-211ENST00000615061 A0A1W2PP11 408 aa13.68□□□□□ -0.22
CBWD3-211ENST00000615061 TRIM77I1YAP6 450 aa13.68□□□□□ -0.22
CBWD3-211ENST00000615061 HTR3BO95264 441 aa13.68□□□□□ -0.22
CBWD3-211ENST00000615061 MTNR1BP49286 362 aa13.68□□□□□ -0.22
CBWD3-211ENST00000615061 DLX6P56179 175 aa13.68□□□□□ -0.22
CBWD3-211ENST00000615061 BLMHQ13867 455 aa13.68□□□□□ -0.22
CBWD3-211ENST00000615061 SLC9A3R2Q15599 337 aa13.68□□□□□ -0.22
CBWD3-211ENST00000615061 ACSM3Q53FZ2 586 aa13.68□□□□□ -0.22
CBWD3-211ENST00000615061 ELP2Q6IA86 826 aa13.68□□□□□ -0.22
CBWD3-211ENST00000615061 ZNF782Q6ZMW2 699 aaPredicted RBP13.68□□□□□ -0.22
CBWD3-211ENST00000615061 OR5D13Q8NGL4 314 aa13.68□□□□□ -0.22
CBWD3-211ENST00000615061 TMEM203Q969S6 136 aa13.68□□□□□ -0.22
CBWD3-211ENST00000615061 RHOFQ9HBH0 211 aa13.68□□□□□ -0.22
CBWD3-211ENST00000615061 GLS2Q9UI32 602 aa13.68□□□□□ -0.22
CBWD3-211ENST00000615061 ING4Q9UNL4 249 aa13.68□□□□□ -0.22
CBWD3-211ENST00000615061 FOXJ3Q9UPW0 622 aa13.68□□□□□ -0.22
CBWD3-211ENST00000615061 SLC33A1O00400 549 aaPredicted RBP13.67□□□□□ -0.22
CBWD3-211ENST00000615061 HOXA3O43365 443 aaPredicted RBP13.67□□□□□ -0.22
CBWD3-211ENST00000615061 LMO1P25800 156 aa13.67□□□□□ -0.22
CBWD3-211ENST00000615061 JAGN1Q8N5M9 183 aa13.67□□□□□ -0.22
CBWD3-211ENST00000615061 SPATA3Q8NHX4 192 aa13.67□□□□□ -0.22
CBWD3-211ENST00000615061 TAF15Q92804 592 aaKnown RBP eCLIP13.67□□□□□ -0.22
CBWD3-211ENST00000615061 ZDHHC16Q969W1 377 aa13.67□□□□□ -0.22
CBWD3-211ENST00000615061 PPIL3Q9H2H8 161 aaKnown RBP13.67□□□□□ -0.22
CBWD3-211ENST00000615061 PRDM13Q9H4Q3 707 aa13.67□□□□□ -0.22
CBWD3-211ENST00000615061 TNFRSF19Q9NS68 423 aa13.67□□□□□ -0.22
CBWD3-211ENST00000615061 ING3Q9NXR8 418 aa13.67□□□□□ -0.22
CBWD3-211ENST00000615061 HSPB6O14558 160 aa13.66□□□□□ -0.22
CBWD3-211ENST00000615061 MGST3O14880 152 aa13.66□□□□□ -0.22
CBWD3-211ENST00000615061 DEGS1O15121 323 aa13.66□□□□□ -0.22
CBWD3-211ENST00000615061 DENRO43583 198 aaKnown RBP13.66□□□□□ -0.22
CBWD3-211ENST00000615061 AESQ08117 197 aa13.66□□□□□ -0.22
CBWD3-211ENST00000615061 UNQ9370/PRO34162Q6UXP9 181 aa13.66□□□□□ -0.22
CBWD3-211ENST00000615061 TBC1D15Q8TC07 691 aa13.66□□□□□ -0.22
CBWD3-211ENST00000615061 FAM216AQ8WUB2 273 aa13.66□□□□□ -0.22
CBWD3-211ENST00000615061 ZFAND2BQ8WV99 257 aa13.66□□□□□ -0.22
CBWD3-211ENST00000615061 UFD1Q92890 307 aa13.66□□□□□ -0.22
CBWD3-211ENST00000615061 MUL1Q969V5 352 aa13.66□□□□□ -0.22
CBWD3-211ENST00000615061 MEIOCA2RUB1 952 aa13.66□□□□□ -0.22
CBWD3-211ENST00000615061 NPFFO15130 113 aa13.66□□□□□ -0.22
CBWD3-211ENST00000615061 SC5DO75845 299 aa13.66□□□□□ -0.22
CBWD3-211ENST00000615061 SERPINA2P20848 420 aa13.66□□□□□ -0.22
CBWD3-211ENST00000615061 MAPK3P27361 379 aaPredicted RBP13.66□□□□□ -0.22
CBWD3-211ENST00000615061 UBE2E1P51965 193 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms