RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 BRICD5Q6PL45 260 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 LINC00299Q6ZSB3 139 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 FAM90A1Q86YD7 464 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 Q8IYB0 196 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 CD177Q8N6Q3 437 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 OR5T2Q8NGG2 359 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 OR11L1Q8NGX0 322 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 OR10R2Q8NGX6 335 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 RAB40AQ8WXH6 277 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 DYRK2Q92630 601 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 ERGIC1Q969X5 290 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 ARHGAP5-AS1Q96IT6 56 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 ABHD1Q96SE0 405 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 URM1Q9BTM9 101 aaKnown RBP6.72□□□□□ -1.33
PCDH9-205ENST00000614931 PECRQ9BY49 303 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 SRRQ9GZT4 340 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 RAB1BQ9H0U4 201 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 AUNIPQ9H7T9 357 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 ZMAT3Q9HA38 289 aaKnown RBP6.72□□□□□ -1.33
PCDH9-205ENST00000614931 BARX1Q9HBU1 254 aaPredicted RBP6.72□□□□□ -1.33
PCDH9-205ENST00000614931 RCC2Q9P258 522 aaKnown RBP6.72□□□□□ -1.33
PCDH9-205ENST00000614931 OR14J1Q9UGF5 321 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 ADAM30Q9UKF2 790 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 ZNF469Q96JG9 3925 aaPredicted RBP6.72□□□□□ -1.33
PCDH9-205ENST00000614931 MTORP42345 2549 aa6.72□□□□□ -1.33
PCDH9-205ENST00000614931 ABCA2Q9BZC7 2435 aa6.71□□□□□ -1.33
PCDH9-205ENST00000614931 YLPM1P49750 1951 aaKnown RBP6.71□□□□□ -1.33
PCDH9-205ENST00000614931 TRAV24A0A0B4J272 114 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 TMEM82A0PJX8 343 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 MEIOCA2RUB1 952 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 TMEM235A6NFC5 223 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 RFPL4AA6NLU0 287 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 RNF223E7ERA6 249 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 RFPL4AL1F8VTS6 287 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 LGALS8O00214 317 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 SIRPB1O00241 398 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 LANCL1O43813 399 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 SSX5O60225 188 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 PSPNO60542 156 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 PDCD6O75340 191 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 OR7C1O76099 320 aaPredicted RBP6.71□□□□□ -1.34
PCDH9-205ENST00000614931 OR2H2O95918 312 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 HAND1O96004 215 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 KNG1P01042 644 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 IGHV2-70P01814 119 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 DAOP14920 347 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 HIST1H1DP16402 221 aaKnown RBP6.71□□□□□ -1.34
PCDH9-205ENST00000614931 GNB3P16520 340 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 CPT2P23786 658 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 BLVRBP30043 206 aaPredicted RBP6.71□□□□□ -1.34
PCDH9-205ENST00000614931 DGCR2P98153 550 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 KRTAP1-1Q07627 177 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 IKZF1Q13422 519 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 IL18Q14116 193 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 ZNF146Q15072 292 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 ZMYND11Q15326 602 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 SMIM21Q3B7S5 101 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 NKAPLQ5M9Q1 402 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 TMEM69Q5SWH9 247 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 TEX36Q5VZQ5 186 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 STUMQ69YW2 141 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 FAM131AQ6UXB0 335 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 Q6ZPA2 131 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 C6orf201Q7Z4U5 140 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 SNX29P2Q8IUI4 249 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 FGFRL1Q8N441 504 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 CHST4Q8NCG5 386 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 DEFB108BQ8NET1 73 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 OR56B1Q8NGI3 324 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 ANGPTL6Q8NI99 470 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 PLPPR1Q8TBJ4 325 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 NEU4Q8WWR8 484 aaPredicted RBP6.71□□□□□ -1.34
PCDH9-205ENST00000614931 ST8SIA4Q92187 359 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 CCL17Q92583 94 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 RDH5Q92781 318 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 MRPS24Q96EL2 167 aaKnown RBP6.71□□□□□ -1.34
PCDH9-205ENST00000614931 S100A16Q96FQ6 103 aaKnown RBP6.71□□□□□ -1.34
PCDH9-205ENST00000614931 GAFA1Q96PS6 74 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 SULT4A1Q9BR01 284 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 HDHD3Q9BSH5 251 aaPredicted RBP6.71□□□□□ -1.34
PCDH9-205ENST00000614931 REG4Q9BYZ8 158 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 RHOFQ9HBH0 211 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 NLKQ9UBE8 527 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 MRPS7Q9Y2R9 242 aaKnown RBP6.71□□□□□ -1.34
PCDH9-205ENST00000614931 WIPI2Q9Y4P8 454 aa6.71□□□□□ -1.34
PCDH9-205ENST00000614931 NIPBLQ6KC79 2804 aaeCLIP6.7□□□□□ -1.34
PCDH9-205ENST00000614931 A0A0A6YYH2 397 aa6.7□□□□□ -1.34
PCDH9-205ENST00000614931 UBE2QL1A1L167 161 aa6.7□□□□□ -1.34
PCDH9-205ENST00000614931 METTL21EPA6NDL7 271 aa6.7□□□□□ -1.34
PCDH9-205ENST00000614931 FAM90A10PA6NDY2 464 aa6.7□□□□□ -1.34
PCDH9-205ENST00000614931 FAM90A18PA6NE21 464 aa6.7□□□□□ -1.34
PCDH9-205ENST00000614931 FAM90A16PA6NEW6 464 aa6.7□□□□□ -1.34
PCDH9-205ENST00000614931 FABP12A6NFH5 140 aa6.7□□□□□ -1.34
PCDH9-205ENST00000614931 OOEPA6NGQ2 149 aa6.7□□□□□ -1.34
PCDH9-205ENST00000614931 FAM90A20PA6NIJ5 464 aa6.7□□□□□ -1.34
PCDH9-205ENST00000614931 A6NJ64 397 aa6.7□□□□□ -1.34
PCDH9-205ENST00000614931 FAM90A8PA6NJQ4 464 aa6.7□□□□□ -1.34
PCDH9-205ENST00000614931 FAM90A7PA6NKC0 464 aa6.7□□□□□ -1.34
PCDH9-205ENST00000614931 OR2AT4A6NND4 320 aa6.7□□□□□ -1.34
PCDH9-205ENST00000614931 FAM90A22PA8MWA6 464 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms