RNA–Protein interactions for RNA: ENST00000613670.4

LIG1-221, Transcript of DNA ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LIG1, Length 3,949 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-221ENST00000613670 GDF1P27539 372 aa11□□□□□ -0.65
LIG1-221ENST00000613670 CYB561D1Q8N8Q1 229 aa11□□□□□ -0.65
LIG1-221ENST00000613670 SPSB1Q96BD6 273 aa11□□□□□ -0.65
LIG1-221ENST00000613670 UFSP2Q9NUQ7 469 aa11□□□□□ -0.65
LIG1-221ENST00000613670 DOCK8Q8NF50 2099 aa11□□□□□ -0.65
LIG1-221ENST00000613670 FUT3P21217 361 aa11□□□□□ -0.65
LIG1-221ENST00000613670 SSR4P51571 173 aa11□□□□□ -0.65
LIG1-221ENST00000613670 ZNF787Q6DD87 383 aa11□□□□□ -0.65
LIG1-221ENST00000613670 RPS19BP1Q86WX3 136 aaKnown RBP11□□□□□ -0.65
LIG1-221ENST00000613670 SDSLQ96GA7 329 aa11□□□□□ -0.65
LIG1-221ENST00000613670 OR51M1Q9H341 326 aa11□□□□□ -0.65
LIG1-221ENST00000613670 WNT16Q9UBV4 365 aa11□□□□□ -0.65
LIG1-221ENST00000613670 OR14J1Q9UGF5 321 aa11□□□□□ -0.65
LIG1-221ENST00000613670 MTCH2Q9Y6C9 303 aa11□□□□□ -0.65
LIG1-221ENST00000613670 CRYM-AS1A6NIL9 109 aa11□□□□□ -0.65
LIG1-221ENST00000613670 GJE1A6NN92 205 aa11□□□□□ -0.65
LIG1-221ENST00000613670 ZNF814B7Z6K7 855 aa11□□□□□ -0.65
LIG1-221ENST00000613670 WDR1O75083 606 aa11□□□□□ -0.65
LIG1-221ENST00000613670 VAMP5O95183 116 aa11□□□□□ -0.65
LIG1-221ENST00000613670 CLDN1O95832 211 aa11□□□□□ -0.65
LIG1-221ENST00000613670 FCGR3AP08637 254 aa11□□□□□ -0.65
LIG1-221ENST00000613670 CCL2P13500 99 aa11□□□□□ -0.65
LIG1-221ENST00000613670 MPV17LQ2QL34 196 aa11□□□□□ -0.65
LIG1-221ENST00000613670 SNAI3Q3KNW1 292 aa11□□□□□ -0.65
LIG1-221ENST00000613670 OR2B11Q5JQS5 317 aa11□□□□□ -0.65
LIG1-221ENST00000613670 NSUN5P2Q63ZY6 315 aa11□□□□□ -0.65
LIG1-221ENST00000613670 OR1F12Q8NHA8 337 aa11□□□□□ -0.65
LIG1-221ENST00000613670 PPP1R3CQ9UQK1 317 aa11□□□□□ -0.65
LIG1-221ENST00000613670 RFNGQ9Y644 331 aa11□□□□□ -0.65
LIG1-221ENST00000613670 DOCK7Q96N67 2140 aa10.99□□□□□ -0.65
LIG1-221ENST00000613670 IGHMP01871 453 aa10.99□□□□□ -0.65
LIG1-221ENST00000613670 CXorf66Q5JRM2 361 aaPredicted RBP10.99□□□□□ -0.65
LIG1-221ENST00000613670 LHFPL2Q6ZUX7 228 aa10.99□□□□□ -0.65
LIG1-221ENST00000613670 MRPL41Q8IXM3 137 aaKnown RBP10.99□□□□□ -0.65
LIG1-221ENST00000613670 D2HGDHQ8N465 521 aa10.99□□□□□ -0.65
LIG1-221ENST00000613670 INTS12Q96CB8 462 aaKnown RBP10.99□□□□□ -0.65
LIG1-221ENST00000613670 DIDO1Q9BTC0 2240 aaKnown RBP10.99□□□□□ -0.65
LIG1-221ENST00000613670 TRBV6-7A0A0A0MS04 114 aa10.99□□□□□ -0.65
LIG1-221ENST00000613670 CHST1O43916 411 aa10.99□□□□□ -0.65
LIG1-221ENST00000613670 PDCD6O75340 191 aa10.99□□□□□ -0.65
LIG1-221ENST00000613670 MRPL33O75394 65 aaKnown RBP10.99□□□□□ -0.65
LIG1-221ENST00000613670 PPYP01298 95 aa10.99□□□□□ -0.65
LIG1-221ENST00000613670 CELA2AP08217 269 aa10.99□□□□□ -0.65
LIG1-221ENST00000613670 DANCRP0C864 163 aa10.99□□□□□ -0.65
LIG1-221ENST00000613670 SLC25A47Q6Q0C1 308 aa10.99□□□□□ -0.65
LIG1-221ENST00000613670 TBC1D26Q86UD7 250 aa10.99□□□□□ -0.65
LIG1-221ENST00000613670 ZNF611Q8N823 705 aa10.99□□□□□ -0.65
LIG1-221ENST00000613670 ABHD14AQ9BUJ0 271 aa10.99□□□□□ -0.65
LIG1-221ENST00000613670 CEP250Q9BV73 2442 aa10.99□□□□□ -0.65
LIG1-221ENST00000613670 DBX1A6NMT0 343 aa10.99□□□□□ -0.65
LIG1-221ENST00000613670 MPPED1O15442 326 aa10.99□□□□□ -0.65
LIG1-221ENST00000613670 TUSC2O75896 110 aa10.99□□□□□ -0.65
LIG1-221ENST00000613670 SRSF4Q08170 494 aaKnown RBP10.99□□□□□ -0.65
LIG1-221ENST00000613670 RABEPKQ7Z6M1 372 aa10.99□□□□□ -0.65
LIG1-221ENST00000613670 NAT6Q93015 286 aa10.99□□□□□ -0.65
LIG1-221ENST00000613670 RHOVQ96L33 236 aa10.99□□□□□ -0.65
LIG1-221ENST00000613670 CALHM2Q9HA72 323 aa10.99□□□□□ -0.65
LIG1-221ENST00000613670 CLEC1BQ9P126 229 aa10.99□□□□□ -0.65
LIG1-221ENST00000613670 UNC80Q8N2C7 3258 aa10.98□□□□□ -0.65
LIG1-221ENST00000613670 SHDQ96IW2 340 aa10.98□□□□□ -0.65
LIG1-221ENST00000613670 FAM210BQ96KR6 192 aa10.98□□□□□ -0.65
LIG1-221ENST00000613670 SNX22Q96L94 193 aa10.98□□□□□ -0.65
LIG1-221ENST00000613670 GPR61Q9BZJ8 451 aa10.98□□□□□ -0.65
LIG1-221ENST00000613670 SLC7A10Q9NS82 523 aa10.98□□□□□ -0.65
LIG1-221ENST00000613670 DOK5Q9P104 306 aa10.98□□□□□ -0.65
LIG1-221ENST00000613670 DFFBO76075 338 aa10.98□□□□□ -0.65
LIG1-221ENST00000613670 TRGC2P03986 189 aa10.98□□□□□ -0.65
LIG1-221ENST00000613670 PCBD1P61457 104 aa10.98□□□□□ -0.65
LIG1-221ENST00000613670 PLGLB1Q02325 96 aa10.98□□□□□ -0.65
LIG1-221ENST00000613670 SSX2Q16385 188 aa10.98□□□□□ -0.65
LIG1-221ENST00000613670 RHBDD2Q6NTF9 364 aa10.98□□□□□ -0.65
LIG1-221ENST00000613670 GUSBP11Q6P575 273 aa10.98□□□□□ -0.65
LIG1-221ENST00000613670 SYT13Q7L8C5 426 aa10.98□□□□□ -0.65
LIG1-221ENST00000613670 WDFY1Q8IWB7 410 aa10.98□□□□□ -0.65
LIG1-221ENST00000613670 OR2M3Q8NG83 312 aa10.98□□□□□ -0.65
LIG1-221ENST00000613670 LHX4Q969G2 390 aa10.98□□□□□ -0.65
LIG1-221ENST00000613670 LAMP3Q9UQV4 416 aa10.98□□□□□ -0.65
LIG1-221ENST00000613670 METTL15P1P0C7V9 234 aa10.98□□□□□ -0.65
LIG1-221ENST00000613670 PRF1P14222 555 aa10.98□□□□□ -0.65
LIG1-221ENST00000613670 GPM6AP51674 278 aa10.98□□□□□ -0.65
LIG1-221ENST00000613670 QRFPP83859 136 aa10.98□□□□□ -0.65
LIG1-221ENST00000613670 VASH2Q86V25 355 aa10.98□□□□□ -0.65
LIG1-221ENST00000613670 GAPTQ8N292 157 aa10.98□□□□□ -0.65
LIG1-221ENST00000613670 ZNF501Q96CX3 271 aaPredicted RBP10.98□□□□□ -0.65
LIG1-221ENST00000613670 B3GAT1Q9P2W7 334 aa10.98□□□□□ -0.65
LIG1-221ENST00000613670 TIMM10BQ9Y5J6 103 aa10.98□□□□□ -0.65
LIG1-221ENST00000613670 GVINP1Q7Z2Y8 2422 aa10.98□□□□□ -0.65
LIG1-221ENST00000613670 TRAV39A0A0B4J263 110 aa10.97□□□□□ -0.65
LIG1-221ENST00000613670 AQP7P3A6NL99 342 aa10.97□□□□□ -0.65
LIG1-221ENST00000613670 ZNF705FA8MVS1 300 aaPredicted RBP10.97□□□□□ -0.65
LIG1-221ENST00000613670 TERTO14746 1132 aaKnown RBP10.97□□□□□ -0.65
LIG1-221ENST00000613670 ATXN7O15265 892 aaPredicted RBP10.97□□□□□ -0.65
LIG1-221ENST00000613670 CYTIPO60759 359 aa10.97□□□□□ -0.65
LIG1-221ENST00000613670 CD5P06127 495 aa10.97□□□□□ -0.65
LIG1-221ENST00000613670 ZNF705DP0CH99 300 aaPredicted RBP10.97□□□□□ -0.65
LIG1-221ENST00000613670 ZNF705BP0CI00 300 aaPredicted RBP10.97□□□□□ -0.65
LIG1-221ENST00000613670 CD200P41217 278 aa10.97□□□□□ -0.65
LIG1-221ENST00000613670 LSM6P62312 80 aaKnown RBP10.97□□□□□ -0.65
LIG1-221ENST00000613670 ZNF100Q8IYN0 542 aa10.97□□□□□ -0.65
LIG1-221ENST00000613670 MEGF10Q96KG7 1140 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms