RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 CEBPDP49716 269 aaPredicted RBP14.75□□□□□ -0.05
SREK1-216ENST00000612404 IFITM3Q01628 133 aa14.75□□□□□ -0.05
SREK1-216ENST00000612404 ZNF146Q15072 292 aa14.75□□□□□ -0.05
SREK1-216ENST00000612404 ZFAND2BQ8WV99 257 aa14.75□□□□□ -0.05
SREK1-216ENST00000612404 NUDCD2Q8WVJ2 157 aa14.75□□□□□ -0.05
SREK1-216ENST00000612404 TMEM106BQ9NUM4 274 aa14.75□□□□□ -0.05
SREK1-216ENST00000612404 USF3Q68DE3 2245 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 RFPL4AA6NLU0 287 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 RFPL4AL1F8VTS6 287 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 SIRPB1O00241 398 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 LANCL1O43813 399 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 HAND1O96004 215 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 KNG1P01042 644 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 GNG2P59768 71 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 ARFRP1Q13795 201 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 ARL6IP1Q15041 203 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 ZNF181Q2M3W8 571 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 HACD4Q5VWC8 232 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 C1orf87Q8N0U7 546 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 YIPF5Q969M3 257 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 SULT4A1Q9BR01 284 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 NLKQ9UBE8 527 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 KLK11Q9UBX7 282 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 HSF4Q9ULV5 492 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 A0A1W2PQ09 198 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 UBE2QL1A1L167 161 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 GSTZ1O43708 216 aaPredicted RBP14.74□□□□□ -0.05
SREK1-216ENST00000612404 OR2H2O95918 312 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 HFEQ30201 348 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 STEAP3Q658P3 488 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 C20orf204Q6ZNR8 217 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 DEFB108BQ8NET1 73 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 NEK7Q8TDX7 302 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 RDH5Q92781 318 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 SPACA1Q9HBV2 294 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 PALMDQ9NP74 551 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 WIPI2Q9Y4P8 454 aa14.74□□□□□ -0.05
SREK1-216ENST00000612404 LINC00854A0A1B0GVQ3 168 aa14.73□□□□□ -0.05
SREK1-216ENST00000612404 OR2AT4A6NND4 320 aa14.73□□□□□ -0.05
SREK1-216ENST00000612404 SERPINE3A8MV23 424 aa14.73□□□□□ -0.05
SREK1-216ENST00000612404 LYNX1G3V0Z9 82 aa14.73□□□□□ -0.05
SREK1-216ENST00000612404 TFF1P04155 84 aa14.73□□□□□ -0.05
SREK1-216ENST00000612404 FCER2P06734 321 aa14.73□□□□□ -0.05
SREK1-216ENST00000612404 LPLP06858 475 aa14.73□□□□□ -0.05
SREK1-216ENST00000612404 MELTFP08582 738 aa14.73□□□□□ -0.05
SREK1-216ENST00000612404 LYNX1P0DP58 116 aa14.73□□□□□ -0.05
SREK1-216ENST00000612404 MICBQ29980 383 aa14.73□□□□□ -0.05
SREK1-216ENST00000612404 Q6P435 159 aa14.73□□□□□ -0.05
SREK1-216ENST00000612404 DCDC5Q6ZRR9 648 aa14.73□□□□□ -0.05
SREK1-216ENST00000612404 TRAPPC6BQ86SZ2 158 aa14.73□□□□□ -0.05
SREK1-216ENST00000612404 BPIFB2Q8N4F0 458 aa14.73□□□□□ -0.05
SREK1-216ENST00000612404 SUMF2Q8NBJ7 301 aa14.73□□□□□ -0.05
SREK1-216ENST00000612404 ST8SIA4Q92187 359 aa14.73□□□□□ -0.05
SREK1-216ENST00000612404 DYRK2Q92630 601 aa14.73□□□□□ -0.05
SREK1-216ENST00000612404 TRAV24A0A0B4J272 114 aa14.72□□□□□ -0.05
SREK1-216ENST00000612404 TMEM178BH3BS89 294 aa14.72□□□□□ -0.05
SREK1-216ENST00000612404 H3BUI4 141 aa14.72□□□□□ -0.05
SREK1-216ENST00000612404 H7C417 338 aa14.72□□□□□ -0.05
SREK1-216ENST00000612404 LY6HO94772 140 aa14.72□□□□□ -0.05
SREK1-216ENST00000612404 PSG2P11465 335 aa14.72□□□□□ -0.05
SREK1-216ENST00000612404 MRPS15P82914 257 aaKnown RBP14.72□□□□□ -0.05
SREK1-216ENST00000612404 PNLIPRP3Q17RR3 467 aa14.72□□□□□ -0.05
SREK1-216ENST00000612404 ZNF57Q68EA5 555 aaPredicted RBP14.72□□□□□ -0.05
SREK1-216ENST00000612404 FAM90A1Q86YD7 464 aa14.72□□□□□ -0.05
SREK1-216ENST00000612404 LYSMD2Q8IV50 215 aa14.72□□□□□ -0.05
SREK1-216ENST00000612404 NEU4Q8WWR8 484 aaPredicted RBP14.72□□□□□ -0.05
SREK1-216ENST00000612404 TRIM63Q969Q1 353 aa14.72□□□□□ -0.05
SREK1-216ENST00000612404 SCPEP1Q9HB40 452 aa14.72□□□□□ -0.05
SREK1-216ENST00000612404 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.72□□□□□ -0.052e-7■□□□□ 9.7
SREK1-216ENST00000612404 RCC2Q9P258 522 aaKnown RBP14.72□□□□□ -0.05
SREK1-216ENST00000612404 SPG11Q96JI7 2443 aa14.72□□□□□ -0.05
SREK1-216ENST00000612404 MCRIP1C9JLW8 97 aa14.72□□□□□ -0.05
SREK1-216ENST00000612404 IFNL4K9M1U5 179 aa14.72□□□□□ -0.05
SREK1-216ENST00000612404 ORC5O43913 435 aa14.72□□□□□ -0.05
SREK1-216ENST00000612404 RBBP9O75884 186 aa14.72□□□□□ -0.05
SREK1-216ENST00000612404 COL8A2P25067 703 aa14.72□□□□□ -0.05
SREK1-216ENST00000612404 GDNFP39905 211 aa14.72□□□□□ -0.05
SREK1-216ENST00000612404 GABRA2P47869 451 aa14.72□□□□□ -0.05
SREK1-216ENST00000612404 PAN3Q58A45 887 aaKnown RBP14.72□□□□□ -0.05
SREK1-216ENST00000612404 ZNF295-AS1Q8N0V1 137 aa14.72□□□□□ -0.05
SREK1-216ENST00000612404 GPX8Q8TED1 209 aa14.72□□□□□ -0.05
SREK1-216ENST00000612404 DPCDQ9BVM2 203 aaPredicted RBP14.72□□□□□ -0.05
SREK1-216ENST00000612404 IFT22Q9H7X7 185 aa14.72□□□□□ -0.05
SREK1-216ENST00000612404 AK3Q9UIJ7 227 aa14.72□□□□□ -0.05
SREK1-216ENST00000612404 FASNP49327 2511 aaKnown RBP14.71□□□□□ -0.05
SREK1-216ENST00000612404 OOEPA6NGQ2 149 aa14.71□□□□□ -0.05
SREK1-216ENST00000612404 SULT1C2O00338 296 aa14.71□□□□□ -0.05
SREK1-216ENST00000612404 SLC33A1O00400 549 aaPredicted RBP14.71□□□□□ -0.05
SREK1-216ENST00000612404 PRDX2P32119 198 aa14.71□□□□□ -0.05
SREK1-216ENST00000612404 CD177Q8N6Q3 437 aa14.71□□□□□ -0.05
SREK1-216ENST00000612404 CCL19Q99731 98 aa14.71□□□□□ -0.05
SREK1-216ENST00000612404 TANC2Q9HCD6 1990 aa14.71□□□□□ -0.05
SREK1-216ENST00000612404 IGKV1D-17A0A075B6S4 117 aa14.71□□□□□ -0.06
SREK1-216ENST00000612404 SSX5O60225 188 aa14.71□□□□□ -0.06
SREK1-216ENST00000612404 PSMG3-AS1Q96PY0 264 aa14.71□□□□□ -0.06
SREK1-216ENST00000612404 CMSS1Q9BQ75 279 aaKnown RBP14.71□□□□□ -0.06
SREK1-216ENST00000612404 HDHD3Q9BSH5 251 aaPredicted RBP14.71□□□□□ -0.06
SREK1-216ENST00000612404 MTFP1Q9UDX5 166 aa14.71□□□□□ -0.06
SREK1-216ENST00000612404 PPIAL4EA0A075B759 164 aa14.7□□□□□ -0.06
SREK1-216ENST00000612404 PPIAL4DF5H284 164 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms