RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 C1orf174Q8IYL3 243 aa13.79□□□□□ -0.2
TNXB-208ENST00000611016 ARL2-SNX15V9GYD0 113 aa13.79□□□□□ -0.2
TNXB-208ENST00000611016 A0A1W2PPQ1 181 aa13.79□□□□□ -0.2
TNXB-208ENST00000611016 C9orf170A2RU37 121 aa13.79□□□□□ -0.2
TNXB-208ENST00000611016 MMP7P09237 267 aaPredicted RBP13.79□□□□□ -0.2
TNXB-208ENST00000611016 LIFP15018 202 aa13.79□□□□□ -0.2
TNXB-208ENST00000611016 MPGP29372 298 aa13.79□□□□□ -0.2
TNXB-208ENST00000611016 FFAR4Q5NUL3 377 aa13.79□□□□□ -0.2
TNXB-208ENST00000611016 ZAR1Q86SH2 424 aa13.79□□□□□ -0.2
TNXB-208ENST00000611016 NOL4LQ96MY1 436 aaPredicted RBP13.79□□□□□ -0.2
TNXB-208ENST00000611016 ZNF426Q9BUY5 554 aa13.79□□□□□ -0.2
TNXB-208ENST00000611016 ORM1P02763 201 aa13.79□□□□□ -0.2
TNXB-208ENST00000611016 PAX5Q02548 391 aa13.79□□□□□ -0.2
TNXB-208ENST00000611016 SPINK9Q5DT21 86 aa13.79□□□□□ -0.2
TNXB-208ENST00000611016 C17orf47Q8NEP4 570 aa13.79□□□□□ -0.2
TNXB-208ENST00000611016 TGIF2Q9GZN2 237 aa13.79□□□□□ -0.2
TNXB-208ENST00000611016 OR5V1Q9UGF6 321 aa13.79□□□□□ -0.2
TNXB-208ENST00000611016 KIAA1217Q5T5P2 1943 aa13.79□□□□□ -0.2
TNXB-208ENST00000611016 OPN1MWP04001 364 aa13.79□□□□□ -0.2
TNXB-208ENST00000611016 INHBBP09529 407 aa13.79□□□□□ -0.2
TNXB-208ENST00000611016 OPN1MW2P0DN77 364 aa13.79□□□□□ -0.2
TNXB-208ENST00000611016 OPN1MW3P0DN78 364 aa13.79□□□□□ -0.2
TNXB-208ENST00000611016 S100A4P26447 101 aaKnown RBP13.79□□□□□ -0.2
TNXB-208ENST00000611016 ASCL5Q7RTU5 278 aa13.79□□□□□ -0.2
TNXB-208ENST00000611016 SLC22A18ASQ8N1D0 253 aa13.79□□□□□ -0.2
TNXB-208ENST00000611016 OR4S2Q8NH73 311 aa13.79□□□□□ -0.2
TNXB-208ENST00000611016 ANKRD20A5PA0PJZ0 165 aa13.78□□□□□ -0.2
TNXB-208ENST00000611016 EPOPA6NHQ4 379 aa13.78□□□□□ -0.2
TNXB-208ENST00000611016 FOXS1O43638 330 aa13.78□□□□□ -0.2
TNXB-208ENST00000611016 CD96P40200 585 aa13.78□□□□□ -0.2
TNXB-208ENST00000611016 GPR35Q9HC97 309 aa13.78□□□□□ -0.2
TNXB-208ENST00000611016 TINAGQ9UJW2 476 aa13.78□□□□□ -0.2
TNXB-208ENST00000611016 RP1L1Q8IWN7 2480 aaPredicted RBP13.78□□□□□ -0.2
TNXB-208ENST00000611016 NTN1O95631 604 aa13.78□□□□□ -0.2
TNXB-208ENST00000611016 COL19A1Q14993 1142 aa13.78□□□□□ -0.2
TNXB-208ENST00000611016 ZNF770Q6IQ21 691 aaPredicted RBP13.78□□□□□ -0.2
TNXB-208ENST00000611016 ZBTB44Q8NCP5 570 aa13.78□□□□□ -0.2
TNXB-208ENST00000611016 TTTY12Q9BZ98 90 aa13.78□□□□□ -0.2
TNXB-208ENST00000611016 TRPM6Q9BX84 2022 aa13.78□□□□□ -0.2
TNXB-208ENST00000611016 B4E171 279 aa13.78□□□□□ -0.2
TNXB-208ENST00000611016 TSPAN7P41732 249 aa13.78□□□□□ -0.2
TNXB-208ENST00000611016 FAM103A1Q9BTL3 118 aaKnown RBP13.78□□□□□ -0.2
TNXB-208ENST00000611016 MRM2Q9UI43 246 aaKnown RBP13.78□□□□□ -0.2
TNXB-208ENST00000611016 MRPS18BQ9Y676 258 aaKnown RBP13.78□□□□□ -0.2
TNXB-208ENST00000611016 OR4A8P0C604 315 aa13.78□□□□□ -0.2
TNXB-208ENST00000611016 DHRS2Q13268 280 aa13.78□□□□□ -0.2
TNXB-208ENST00000611016 SLC16A12Q6ZSM3 486 aa13.78□□□□□ -0.2
TNXB-208ENST00000611016 LSMEM1Q8N8F7 131 aa13.78□□□□□ -0.2
TNXB-208ENST00000611016 ZNF441Q8N8Z8 693 aa13.78□□□□□ -0.2
TNXB-208ENST00000611016 MANBALQ9NQG1 85 aa13.78□□□□□ -0.2
TNXB-208ENST00000611016 LYRM2Q9NU23 88 aaPredicted RBP13.78□□□□□ -0.2
TNXB-208ENST00000611016 POLR2AP24928 1970 aaKnown RBP13.78□□□□□ -0.2
TNXB-208ENST00000611016 COL4A5P29400 1685 aa13.78□□□□□ -0.2
TNXB-208ENST00000611016 SHANK3Q9BYB0 1731 aa13.78□□□□□ -0.2
TNXB-208ENST00000611016 C16orf97H3BN30 126 aa13.78□□□□□ -0.2
TNXB-208ENST00000611016 OGG1O15527 345 aa13.78□□□□□ -0.2
TNXB-208ENST00000611016 CA11O75493 328 aa13.78□□□□□ -0.2
TNXB-208ENST00000611016 HSBP1O75506 76 aa13.78□□□□□ -0.2
TNXB-208ENST00000611016 PNPP00491 289 aa13.78□□□□□ -0.2
TNXB-208ENST00000611016 LPAR3Q9UBY5 353 aa13.78□□□□□ -0.2
TNXB-208ENST00000611016 CLDN34H7C241 214 aa13.77□□□□□ -0.2
TNXB-208ENST00000611016 TRIP11Q15643 1979 aa13.77□□□□□ -0.2
TNXB-208ENST00000611016 MYPOPQ86VE0 399 aaPredicted RBP13.77□□□□□ -0.2
TNXB-208ENST00000611016 TMEM52Q8NDY8 209 aa13.77□□□□□ -0.2
TNXB-208ENST00000611016 TMEM167BQ9NRX6 74 aa13.77□□□□□ -0.2
TNXB-208ENST00000611016 PLXNB2O15031 1838 aa13.77□□□□□ -0.2
TNXB-208ENST00000611016 COL24A1Q17RW2 1714 aa13.77□□□□□ -0.21
TNXB-208ENST00000611016 CACNA1CQ13936 2221 aa13.77□□□□□ -0.21
TNXB-208ENST00000611016 CDIPTO14735 213 aa13.77□□□□□ -0.21
TNXB-208ENST00000611016 TMEM241Q24JQ0 296 aa13.77□□□□□ -0.21
TNXB-208ENST00000611016 DMKNQ6E0U4 476 aaPredicted RBP13.77□□□□□ -0.21
TNXB-208ENST00000611016 OR4D11Q8NGI4 311 aa13.77□□□□□ -0.21
TNXB-208ENST00000611016 ZNF721Q8TF20 911 aa13.77□□□□□ -0.21
TNXB-208ENST00000611016 ZNF501Q96CX3 271 aaPredicted RBP13.77□□□□□ -0.21
TNXB-208ENST00000611016 OR2H1Q9GZK4 316 aa13.77□□□□□ -0.21
TNXB-208ENST00000611016 CES1P1Q9UKY3 287 aa13.77□□□□□ -0.21
TNXB-208ENST00000611016 P2RY1P47900 373 aa13.77□□□□□ -0.21
TNXB-208ENST00000611016 AMTP48728 403 aa13.77□□□□□ -0.21
TNXB-208ENST00000611016 ZBTB34Q8NCN2 500 aa13.77□□□□□ -0.21
TNXB-208ENST00000611016 LOXL4Q96JB6 756 aa13.77□□□□□ -0.21
TNXB-208ENST00000611016 TRAPPC1Q9Y5R8 145 aa13.77□□□□□ -0.21
TNXB-208ENST00000611016 IGHA1P01876 353 aa13.77□□□□□ -0.21
TNXB-208ENST00000611016 C1QAP02745 245 aa13.77□□□□□ -0.21
TNXB-208ENST00000611016 SLC6A1P30531 599 aa13.77□□□□□ -0.21
TNXB-208ENST00000611016 CLEC12BQ2HXU8 276 aa13.77□□□□□ -0.21
TNXB-208ENST00000611016 MIDNQ504T8 468 aa13.77□□□□□ -0.21
TNXB-208ENST00000611016 SH2D2AQ9NP31 389 aa13.77□□□□□ -0.21
TNXB-208ENST00000611016 TRIP12Q14669 1992 aaPredicted RBP13.77□□□□□ -0.21
TNXB-208ENST00000611016 DNASE2O00115 360 aaPredicted RBP13.76□□□□□ -0.21
TNXB-208ENST00000611016 PRSS23O95084 383 aa13.76□□□□□ -0.21
TNXB-208ENST00000611016 PNRC1Q12796 327 aaPredicted RBP13.76□□□□□ -0.21
TNXB-208ENST00000611016 ZNF528Q3MIS6 628 aa13.76□□□□□ -0.21
TNXB-208ENST00000611016 COL13A1Q5TAT6 717 aaPredicted RBP13.76□□□□□ -0.21
TNXB-208ENST00000611016 MAP1LC3B2A6NCE7 125 aa13.76□□□□□ -0.21
TNXB-208ENST00000611016 OOEPA6NGQ2 149 aa13.76□□□□□ -0.21
TNXB-208ENST00000611016 FCER1GP30273 86 aa13.76□□□□□ -0.21
TNXB-208ENST00000611016 TNXAQ16473 311 aa13.76□□□□□ -0.21
TNXB-208ENST00000611016 DPF1Q92782 380 aa13.76□□□□□ -0.21
TNXB-208ENST00000611016 MAP1LC3BQ9GZQ8 125 aa13.76□□□□□ -0.21
TNXB-208ENST00000611016 SLC35B3Q9H1N7 401 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 1007.3 ms