RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 PLPPR2Q96GM1 343 aa6□□□□□ -1.45
SYNPO2-206ENST00000610556 PLA2G3Q9NZ20 509 aa6□□□□□ -1.45
SYNPO2-206ENST00000610556 GAB2Q9UQC2 676 aa6□□□□□ -1.45
SYNPO2-206ENST00000610556 LIPGQ9Y5X9 500 aa6□□□□□ -1.45
SYNPO2-206ENST00000610556 A0A1W2PR80 420 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 IL2RAP01589 272 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 MBPP02686 304 aaPredicted RBP5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 IFNA4P05014 189 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 ZNF708P17019 499 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 CFHR1Q03591 330 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 IGSF11Q5DX21 431 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 CST9LP1Q5W188 147 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 DHRS11Q6UWP2 260 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 SLC35G3Q8N808 338 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 RPUSD4Q96CM3 377 aaKnown RBP5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 ZNF837Q96EG3 531 aaPredicted RBP5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 PLEKHF2Q9H8W4 249 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 UFSP2Q9NUQ7 469 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 ERRFI1Q9UJM3 462 aaPredicted RBP5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 WASF3Q9UPY6 502 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 TMED3Q9Y3Q3 217 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 WSB1Q9Y6I7 421 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 A0A1B0GTQ1 180 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 C5orf63A6NC05 138 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 PATE3B3GLJ2 98 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 EIF3GO75821 320 aaKnown RBP eCLIP5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 PPYP01298 95 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 MELTFP08582 738 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 FOSL2P15408 326 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 RUNX1Q01196 453 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 CLN3Q13286 438 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 SURF2Q15527 256 aaPredicted RBP5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 CSRP2Q16527 193 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 ASPHD2Q6ICH7 369 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 ZDHHC23Q8IYP9 409 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 INTS12Q96CB8 462 aaKnown RBP5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 A0A0A6YYD4 124 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 IGKV1-9A0A0C4DH69 117 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 S100A8P05109 93 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 FABP1P07148 127 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 FCGR3AP08637 254 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 METTL15P1P0C7V9 234 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 CALCRP30988 508 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 GABRA4P48169 554 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 SULT1A2P50226 295 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 MECP2P51608 486 aaKnown RBP5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 FGF8P55075 233 aaPredicted RBP5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 RAB1AP62820 205 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 HBG1P69891 147 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 HBG2P69892 147 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 DEFA6Q01524 100 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 SPINK14Q6IE38 97 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 FAM166AQ6J272 317 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 TBC1D26Q86UD7 250 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 SKA3Q8IX90 412 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 CARFQ8N187 725 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 GAPTQ8N292 157 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 GNPNAT1Q96EK6 184 aaPredicted RBP5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 AQP10Q96PS8 301 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 RTBDNQ9BSG5 229 aaPredicted RBP5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 DEFB127Q9H1M4 99 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 SH3BGRL3Q9H299 93 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 MYOZ1Q9NP98 299 aaPredicted RBP5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 SLC7A10Q9NS82 523 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 RCC2Q9P258 522 aaKnown RBP5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 B3GAT1Q9P2W7 334 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 FANCMQ8IYD8 2048 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 COL4A3Q01955 1670 aa5.99□□□□□ -1.45
SYNPO2-206ENST00000610556 A0A1W2PQM1 296 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 ZNF727A8MUV8 499 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 MPPED1O15442 326 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 EFNA2O43921 213 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 DFFBO76075 338 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 IGHMP01871 453 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 HOXA1P49639 335 aaPredicted RBP5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 SULT1A1P50225 295 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 NOVA1P51513 510 aaKnown RBP5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 RAC3P60763 192 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 CTAG1AP78358 180 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 ZXDAP98168 799 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 PMP22Q01453 160 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 ZNF92Q03936 586 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 BAXQ07812 192 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 DMWDQ09019 674 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 PRDX4Q13162 271 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 COL19A1Q14993 1142 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 CDCP2Q5VXM1 449 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 ZNF787Q6DD87 383 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 OR2T2Q6IF00 324 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 ZNF429Q86V71 674 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 POC1AQ8NBT0 407 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 OR52M1Q8NGK5 317 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 POC1BQ8TC44 478 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 NANOS1Q8WY41 292 aaKnown RBP5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 LHX4Q969G2 390 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 TMEM230Q96A57 120 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 IP6K3Q96PC2 410 aa5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 USB1Q9BQ65 265 aaKnown RBP5.98□□□□□ -1.45
SYNPO2-206ENST00000610556 EDEM2Q9BV94 578 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms