RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 SPATA3Q8NHX4 192 aa11.74□□□□□ -0.53
HDDC2-209ENST00000609477 TNFAIP8L1Q8WVP5 186 aa11.74□□□□□ -0.53
HDDC2-209ENST00000609477 PHYHIPQ92561 330 aa11.74□□□□□ -0.53
HDDC2-209ENST00000609477 UFD1Q92890 307 aa11.74□□□□□ -0.53
HDDC2-209ENST00000609477 OR5M11Q96RB7 305 aa11.74□□□□□ -0.53
HDDC2-209ENST00000609477 S100A13Q99584 98 aa11.74□□□□□ -0.53
HDDC2-209ENST00000609477 CCDC90BQ9GZT6 254 aa11.74□□□□□ -0.53
HDDC2-209ENST00000609477 NOX4Q9NPH5 578 aa11.74□□□□□ -0.53
HDDC2-209ENST00000609477 GSTK1Q9Y2Q3 226 aa11.74□□□□□ -0.53
HDDC2-209ENST00000609477 PNMA8CA0A1B0GUJ8 204 aa11.73□□□□□ -0.53
HDDC2-209ENST00000609477 COL6A5A8TX70 2615 aa11.73□□□□□ -0.53
HDDC2-209ENST00000609477 CLDN34H7C241 214 aa11.73□□□□□ -0.53
HDDC2-209ENST00000609477 VENTXO95231 258 aa11.73□□□□□ -0.53
HDDC2-209ENST00000609477 CSN2P05814 226 aa11.73□□□□□ -0.53
HDDC2-209ENST00000609477 EEF1B2P24534 225 aaKnown RBP11.73□□□□□ -0.53
HDDC2-209ENST00000609477 IL13RA2Q14627 380 aa11.73□□□□□ -0.53
HDDC2-209ENST00000609477 TBCEQ15813 527 aaPredicted RBP11.73□□□□□ -0.53
HDDC2-209ENST00000609477 NHLRC3Q5JS37 347 aa11.73□□□□□ -0.53
HDDC2-209ENST00000609477 TMEM200BQ69YZ2 307 aa11.73□□□□□ -0.53
HDDC2-209ENST00000609477 LINC00596Q86U02 117 aa11.73□□□□□ -0.53
HDDC2-209ENST00000609477 FAM185AQ8N0U4 392 aa11.73□□□□□ -0.53
HDDC2-209ENST00000609477 FAM216AQ8WUB2 273 aa11.73□□□□□ -0.53
HDDC2-209ENST00000609477 C22orf15Q8WYQ4 148 aa11.73□□□□□ -0.53
HDDC2-209ENST00000609477 SGCDQ92629 289 aa11.73□□□□□ -0.53
HDDC2-209ENST00000609477 LHX4Q969G2 390 aa11.73□□□□□ -0.53
HDDC2-209ENST00000609477 MDFIQ99750 246 aa11.73□□□□□ -0.53
HDDC2-209ENST00000609477 METTL9Q9H1A3 318 aa11.73□□□□□ -0.53
HDDC2-209ENST00000609477 C19orf12Q9NSK7 152 aa11.73□□□□□ -0.53
HDDC2-209ENST00000609477 hADV38S2A0JD32 116 aa11.72□□□□□ -0.53
HDDC2-209ENST00000609477 TMEM82A0PJX8 343 aa11.72□□□□□ -0.53
HDDC2-209ENST00000609477 SC5DO75845 299 aa11.72□□□□□ -0.53
HDDC2-209ENST00000609477 OR2H2O95918 312 aa11.72□□□□□ -0.53
HDDC2-209ENST00000609477 CSTBP04080 98 aaKnown RBP11.72□□□□□ -0.53
HDDC2-209ENST00000609477 CPEP16870 476 aa11.72□□□□□ -0.53
HDDC2-209ENST00000609477 GABRR1P24046 479 aa11.72□□□□□ -0.53
HDDC2-209ENST00000609477 UBE2E1P51965 193 aa11.72□□□□□ -0.53
HDDC2-209ENST00000609477 GRK1Q15835 563 aa11.72□□□□□ -0.53
HDDC2-209ENST00000609477 ACSM3Q53FZ2 586 aa11.72□□□□□ -0.53
HDDC2-209ENST00000609477 RNF144BQ7Z419 303 aa11.72□□□□□ -0.53
HDDC2-209ENST00000609477 SIGLECL1Q8N7X8 197 aa11.72□□□□□ -0.53
HDDC2-209ENST00000609477 TNFRSF14Q92956 283 aa11.72□□□□□ -0.53
HDDC2-209ENST00000609477 FOXRED1Q96CU9 486 aaPredicted RBP11.72□□□□□ -0.53
HDDC2-209ENST00000609477 MRPS24Q96EL2 167 aaKnown RBP11.72□□□□□ -0.53
HDDC2-209ENST00000609477 UQCC2Q9BRT2 126 aa11.72□□□□□ -0.53
HDDC2-209ENST00000609477 FAM192AQ9GZU8 254 aa11.72□□□□□ -0.53
HDDC2-209ENST00000609477 IFT22Q9H7X7 185 aa11.72□□□□□ -0.53
HDDC2-209ENST00000609477 HEXA-AS1Q9H8Q6 139 aa11.72□□□□□ -0.53
HDDC2-209ENST00000609477 ELL3Q9HB65 397 aaPredicted RBP11.72□□□□□ -0.53
HDDC2-209ENST00000609477 IL36RNQ9UBH0 155 aa11.72□□□□□ -0.53
HDDC2-209ENST00000609477 LINC00312Q9Y6C7 94 aa11.72□□□□□ -0.53
HDDC2-209ENST00000609477 TRAV8-7A0A075B6U6 113 aa11.71□□□□□ -0.53
HDDC2-209ENST00000609477 A0A0G2JK05 382 aa11.71□□□□□ -0.53
HDDC2-209ENST00000609477 C17orf98A8MV24 154 aa11.71□□□□□ -0.53
HDDC2-209ENST00000609477 DEGS1O15121 323 aa11.71□□□□□ -0.53
HDDC2-209ENST00000609477 PSPNO60542 156 aa11.71□□□□□ -0.53
HDDC2-209ENST00000609477 ZNF44P15621 663 aa11.71□□□□□ -0.53
HDDC2-209ENST00000609477 DUSP1P28562 367 aa11.71□□□□□ -0.53
HDDC2-209ENST00000609477 RANBP1P43487 201 aa11.71□□□□□ -0.53
HDDC2-209ENST00000609477 KCNJ3P48549 501 aa11.71□□□□□ -0.53
HDDC2-209ENST00000609477 EDDM3BP56851 147 aa11.71□□□□□ -0.53
HDDC2-209ENST00000609477 PAX5Q02548 391 aa11.71□□□□□ -0.53
HDDC2-209ENST00000609477 KRTAP24-1Q3LI83 254 aa11.71□□□□□ -0.53
HDDC2-209ENST00000609477 Q6P435 159 aa11.71□□□□□ -0.53
HDDC2-209ENST00000609477 BRD3OSQ6XYD6 125 aa11.71□□□□□ -0.53
HDDC2-209ENST00000609477 BCL6BQ8N143 479 aaPredicted RBP11.71□□□□□ -0.53
HDDC2-209ENST00000609477 SVOPQ8N4V2 548 aa11.71□□□□□ -0.53
HDDC2-209ENST00000609477 TMEM86BQ8N661 226 aa11.71□□□□□ -0.53
HDDC2-209ENST00000609477 MGLLQ99685 303 aa11.71□□□□□ -0.53
HDDC2-209ENST00000609477 NCOR1P1Q9H4R4 102 aa11.71□□□□□ -0.53
HDDC2-209ENST00000609477 TCF7L1Q9HCS4 588 aa11.71□□□□□ -0.53
HDDC2-209ENST00000609477 GHRLQ9UBU3 117 aa11.71□□□□□ -0.53
HDDC2-209ENST00000609477 SF3B6Q9Y3B4 125 aaKnown RBP11.71□□□□□ -0.53
HDDC2-209ENST00000609477 LRRC42Q9Y546 428 aa11.71□□□□□ -0.53
HDDC2-209ENST00000609477 IGHV3OR16-10A0A075B7F0 116 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 RNASEK-C17orf49H0YIS7 233 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 H3BUI4 141 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 PIN1P1O15428 100 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 HSMCR30P0CW71 290 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 ZNF728P0DKX0 622 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 GTF2F2P13984 249 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 OR3A1P47881 315 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 OR3A4PP47883 348 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 P2RX3P56373 397 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 ERVFRD-1P60508 538 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 BAMBIQ13145 260 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 MIDNQ504T8 468 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 LIPKQ5VXJ0 399 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 Q6YL49 198 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 ZNF367Q7RTV3 350 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 LYPD6Q86Y78 171 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 OSR2Q8N2R0 312 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 C11orf42Q8N5U0 333 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 ZDHHC22Q8N966 263 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 OR4M1Q8NGD0 313 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 CORO2AQ92828 525 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 ZDHHC16Q969W1 377 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 SLC25A28Q96A46 364 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 ORAI1Q96D31 301 aa11.7□□□□□ -0.54
HDDC2-209ENST00000609477 ZNF48Q96MX3 618 aaPredicted RBP11.7□□□□□ -0.54
HDDC2-209ENST00000609477 ZNF714Q96N38 554 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms