RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 ZNF91Q05481 1191 aa11.9□□□□□ -0.5
CTSA-216ENST00000607212 AADACL4Q5VUY2 407 aa11.9□□□□□ -0.5
CTSA-216ENST00000607212 CCDC54Q8NEL0 328 aa11.9□□□□□ -0.5
CTSA-216ENST00000607212 RCC1LQ96I51 464 aaKnown RBP11.9□□□□□ -0.5
CTSA-216ENST00000607212 LIN7BQ9HAP6 207 aa11.9□□□□□ -0.5
CTSA-216ENST00000607212 WARS2Q9UGM6 360 aaKnown RBP11.9□□□□□ -0.5
CTSA-216ENST00000607212 GNG8Q9UK08 70 aa11.9□□□□□ -0.5
CTSA-216ENST00000607212 UBE2J1Q9Y385 318 aaPredicted RBP11.9□□□□□ -0.5
CTSA-216ENST00000607212 LOC107986453A0A1B0GWG9 222 aa11.89□□□□□ -0.51
CTSA-216ENST00000607212 A0A1W2PQL4 384 aaPredicted RBP11.89□□□□□ -0.51
CTSA-216ENST00000607212 K7EIL1 84 aa11.89□□□□□ -0.51
CTSA-216ENST00000607212 SH2D1BO14796 132 aa11.89□□□□□ -0.51
CTSA-216ENST00000607212 PSPNO60542 156 aa11.89□□□□□ -0.51
CTSA-216ENST00000607212 MMP23AO75900 390 aa11.89□□□□□ -0.51
CTSA-216ENST00000607212 OR2T7P0C7T2 308 aa11.89□□□□□ -0.51
CTSA-216ENST00000607212 CDK2P24941 298 aa11.89□□□□□ -0.51
CTSA-216ENST00000607212 CEACAM3P40198 252 aa11.89□□□□□ -0.51
CTSA-216ENST00000607212 NPBWR2P48146 333 aa11.89□□□□□ -0.51
CTSA-216ENST00000607212 FAHD1Q6P587 224 aa11.89□□□□□ -0.51
CTSA-216ENST00000607212 RTN4RL2Q86UN3 420 aa11.89□□□□□ -0.51
CTSA-216ENST00000607212 OR4P4Q8NGL7 312 aa11.89□□□□□ -0.51
CTSA-216ENST00000607212 RFT1Q96AA3 541 aa11.89□□□□□ -0.51
CTSA-216ENST00000607212 TRBV2A0A0J9YWF9 115 aa11.88□□□□□ -0.51
CTSA-216ENST00000607212 TCRBV3S1A0A5B6 114 aa11.88□□□□□ -0.51
CTSA-216ENST00000607212 ZAR1LA6NP61 321 aa11.88□□□□□ -0.51
CTSA-216ENST00000607212 FAM90A22PA8MWA6 464 aa11.88□□□□□ -0.51
CTSA-216ENST00000607212 E9PQ18 207 aa11.88□□□□□ -0.51
CTSA-216ENST00000607212 G3V2T6 193 aa11.88□□□□□ -0.51
CTSA-216ENST00000607212 ENTPD6O75354 484 aa11.88□□□□□ -0.51
CTSA-216ENST00000607212 UBCP0CG48 685 aaKnown RBP11.88□□□□□ -0.51
CTSA-216ENST00000607212 ZNF44P15621 663 aa11.88□□□□□ -0.51
CTSA-216ENST00000607212 PRKACBP22694 351 aa11.88□□□□□ -0.51
CTSA-216ENST00000607212 NFYBP25208 207 aa11.88□□□□□ -0.51
CTSA-216ENST00000607212 HOXD3P31249 432 aaPredicted RBP11.88□□□□□ -0.51
CTSA-216ENST00000607212 MNDAP41218 407 aa11.88□□□□□ -0.51
CTSA-216ENST00000607212 OR3A1P47881 315 aa11.88□□□□□ -0.51
CTSA-216ENST00000607212 OR3A4PP47883 348 aa11.88□□□□□ -0.51
CTSA-216ENST00000607212 CD69Q07108 199 aa11.88□□□□□ -0.51
CTSA-216ENST00000607212 TP53I3Q53FA7 332 aa11.88□□□□□ -0.51
CTSA-216ENST00000607212 SPIN3Q5JUX0 258 aa11.88□□□□□ -0.51
CTSA-216ENST00000607212 C12orf73Q69YU5 71 aa11.88□□□□□ -0.51
CTSA-216ENST00000607212 BAIAP2L2Q6UXY1 529 aa11.88□□□□□ -0.51
CTSA-216ENST00000607212 LHFPL2Q6ZUX7 228 aa11.88□□□□□ -0.51
CTSA-216ENST00000607212 RDH10Q8IZV5 341 aa11.88□□□□□ -0.51
CTSA-216ENST00000607212 WFDC9Q8NEX5 89 aa11.88□□□□□ -0.51
CTSA-216ENST00000607212 OR4D6Q8NGJ1 314 aa11.88□□□□□ -0.51
CTSA-216ENST00000607212 PP6455Q8WZ26 134 aa11.88□□□□□ -0.51
CTSA-216ENST00000607212 ENOPH1Q9UHY7 261 aa11.88□□□□□ -0.51
CTSA-216ENST00000607212 NUDT19A8MXV4 375 aa11.87□□□□□ -0.51
CTSA-216ENST00000607212 SULT1C4O75897 302 aa11.87□□□□□ -0.51
CTSA-216ENST00000607212 OR2F2O95006 317 aa11.87□□□□□ -0.51
CTSA-216ENST00000607212 DUS4LO95620 317 aaKnown RBP11.87□□□□□ -0.51
CTSA-216ENST00000607212 ATF1P18846 271 aa11.87□□□□□ -0.51
CTSA-216ENST00000607212 EPHA2P29317 976 aa11.87□□□□□ -0.51
CTSA-216ENST00000607212 ERP29P30040 261 aaKnown RBP11.87□□□□□ -0.51
CTSA-216ENST00000607212 PTGFRP43088 359 aa11.87□□□□□ -0.51
CTSA-216ENST00000607212 PRRX1P54821 245 aa11.87□□□□□ -0.51
CTSA-216ENST00000607212 AESQ08117 197 aa11.87□□□□□ -0.51
CTSA-216ENST00000607212 BNIP1Q12981 228 aa11.87□□□□□ -0.51
CTSA-216ENST00000607212 CCDC144NLQ6NUI1 221 aa11.87□□□□□ -0.51
CTSA-216ENST00000607212 C11orf87Q6NUJ2 197 aa11.87□□□□□ -0.51
CTSA-216ENST00000607212 C10orf99Q6UWK7 81 aa11.87□□□□□ -0.51
CTSA-216ENST00000607212 Q6ZSR3 168 aa11.87□□□□□ -0.51
CTSA-216ENST00000607212 PRSS35Q8N3Z0 413 aa11.87□□□□□ -0.51
CTSA-216ENST00000607212 OR51D1Q8NGF3 324 aa11.87□□□□□ -0.51
CTSA-216ENST00000607212 OR5D18Q8NGL1 313 aa11.87□□□□□ -0.51
CTSA-216ENST00000607212 CREB3L1Q96BA8 519 aa11.87□□□□□ -0.51
CTSA-216ENST00000607212 FGGYQ96C11 551 aa11.87□□□□□ -0.51
CTSA-216ENST00000607212 C10orf35Q96D05 121 aa11.87□□□□□ -0.51
CTSA-216ENST00000607212 OPALINQ96PE5 141 aa11.87□□□□□ -0.51
CTSA-216ENST00000607212 RBM14Q96PK6 669 aaKnown RBP11.87□□□□□ -0.51
CTSA-216ENST00000607212 GPR61Q9BZJ8 451 aa11.87□□□□□ -0.51
CTSA-216ENST00000607212 RIBC2Q9H4K1 309 aa11.87□□□□□ -0.51
CTSA-216ENST00000607212 POMPQ9Y244 141 aa11.87□□□□□ -0.51
CTSA-216ENST00000607212 WI2-2373I1.2A0A1W2PRP0 233 aa11.86□□□□□ -0.51
CTSA-216ENST00000607212 PSMB11A5LHX3 300 aa11.86□□□□□ -0.51
CTSA-216ENST00000607212 OR2H2O95918 312 aa11.86□□□□□ -0.51
CTSA-216ENST00000607212 HTR1FP30939 366 aa11.86□□□□□ -0.51
CTSA-216ENST00000607212 GLIPR1P48060 266 aa11.86□□□□□ -0.51
CTSA-216ENST00000607212 CDC42P60953 191 aa11.86□□□□□ -0.51
CTSA-216ENST00000607212 BDH1Q02338 343 aa11.86□□□□□ -0.51
CTSA-216ENST00000607212 HES1Q14469 280 aa11.86□□□□□ -0.51
CTSA-216ENST00000607212 ZNF146Q15072 292 aa11.86□□□□□ -0.51
CTSA-216ENST00000607212 TCTEX1D4Q5JR98 221 aa11.86□□□□□ -0.51
CTSA-216ENST00000607212 KRBOX4Q5JUW0 171 aa11.86□□□□□ -0.51
CTSA-216ENST00000607212 TMEM244Q5VVB8 128 aa11.86□□□□□ -0.51
CTSA-216ENST00000607212 ZDHHC13Q8IUH4 622 aa11.86□□□□□ -0.51
CTSA-216ENST00000607212 DNAAF1Q8NEP3 725 aa11.86□□□□□ -0.51
CTSA-216ENST00000607212 RPEQ96AT9 228 aa11.86□□□□□ -0.51
CTSA-216ENST00000607212 ADAT3Q96EY9 351 aaPredicted RBP11.86□□□□□ -0.51
CTSA-216ENST00000607212 ZNF286AQ9HBT8 521 aa11.86□□□□□ -0.51
CTSA-216ENST00000607212 TAS2R3Q9NYW6 316 aa11.86□□□□□ -0.51
CTSA-216ENST00000607212 M0QZK8 103 aa11.85□□□□□ -0.51
CTSA-216ENST00000607212 FAM106CPP0CH98 169 aa11.85□□□□□ -0.51
CTSA-216ENST00000607212 KIR3DL2P43630 455 aa11.85□□□□□ -0.51
CTSA-216ENST00000607212 PDZK1IP1Q13113 114 aa11.85□□□□□ -0.51
CTSA-216ENST00000607212 ATXN7L3Q14CW9 347 aaPredicted RBP11.85□□□□□ -0.51
CTSA-216ENST00000607212 HLA-DRB5Q30154 266 aa11.85□□□□□ -0.51
CTSA-216ENST00000607212 TPTE2P1Q5T6R2 138 aa11.85□□□□□ -0.51
CTSA-216ENST00000607212 HEPN1Q6WQI6 88 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms