RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 DNTTIP1Q9H147 329 aa13.84□□□□□ -0.19
PMF1-206ENST00000606952 TREM2Q9NZC2 230 aa13.84□□□□□ -0.19
PMF1-206ENST00000606952 GLS2Q9UI32 602 aa13.84□□□□□ -0.19
PMF1-206ENST00000606952 ZNF107Q9UII5 783 aaPredicted RBP13.84□□□□□ -0.19
PMF1-206ENST00000606952 WIPI2Q9Y4P8 454 aa13.84□□□□□ -0.19
PMF1-206ENST00000606952 TMEM235A6NFC5 223 aa13.83□□□□□ -0.2
PMF1-206ENST00000606952 OOEPA6NGQ2 149 aa13.83□□□□□ -0.2
PMF1-206ENST00000606952 POM121CA8CG34 1229 aa13.83□□□□□ -0.2
PMF1-206ENST00000606952 C3orf80F5H4A9 247 aa13.83□□□□□ -0.2
PMF1-206ENST00000606952 SLC33A1O00400 549 aaPredicted RBP13.83□□□□□ -0.2
PMF1-206ENST00000606952 OR2H2O95918 312 aa13.83□□□□□ -0.2
PMF1-206ENST00000606952 CYB5R3P00387 301 aaPredicted RBP13.83□□□□□ -0.2
PMF1-206ENST00000606952 PSG2P11465 335 aa13.83□□□□□ -0.2
PMF1-206ENST00000606952 PAX1P15863 534 aa13.83□□□□□ -0.2
PMF1-206ENST00000606952 GNB3P16520 340 aa13.83□□□□□ -0.2
PMF1-206ENST00000606952 COL8A1P27658 744 aa13.83□□□□□ -0.2
PMF1-206ENST00000606952 SSTR2P30874 369 aa13.83□□□□□ -0.2
PMF1-206ENST00000606952 MADCAM1Q13477 382 aa13.83□□□□□ -0.2
PMF1-206ENST00000606952 ATPAF1Q5TC12 328 aaPredicted RBP13.83□□□□□ -0.2
PMF1-206ENST00000606952 RTN4RL2Q86UN3 420 aa13.83□□□□□ -0.2
PMF1-206ENST00000606952 LYSMD2Q8IV50 215 aa13.83□□□□□ -0.2
PMF1-206ENST00000606952 GAPTQ8N292 157 aa13.83□□□□□ -0.2
PMF1-206ENST00000606952 OR52I2Q8NH67 350 aa13.83□□□□□ -0.2
PMF1-206ENST00000606952 ANGPTL6Q8NI99 470 aa13.83□□□□□ -0.2
PMF1-206ENST00000606952 FCAMRQ8WWV6 532 aa13.83□□□□□ -0.2
PMF1-206ENST00000606952 DEDD2Q8WXF8 326 aa13.83□□□□□ -0.2
PMF1-206ENST00000606952 SULT4A1Q9BR01 284 aa13.83□□□□□ -0.2
PMF1-206ENST00000606952 THAP7Q9BT49 309 aaPredicted RBP13.83□□□□□ -0.2
PMF1-206ENST00000606952 PLEKHJ1Q9NW61 149 aa13.83□□□□□ -0.2
PMF1-206ENST00000606952 DCAF16Q9NXF7 216 aa13.83□□□□□ -0.2
PMF1-206ENST00000606952 MTFP1Q9UDX5 166 aa13.83□□□□□ -0.2
PMF1-206ENST00000606952 CACNG2Q9Y698 323 aa13.83□□□□□ -0.2
PMF1-206ENST00000606952 IGKV1D-17A0A075B6S4 117 aa13.82□□□□□ -0.2
PMF1-206ENST00000606952 TRBV6-6A0A0A6YYG2 114 aa13.82□□□□□ -0.2
PMF1-206ENST00000606952 MEIOCA2RUB1 952 aa13.82□□□□□ -0.2
PMF1-206ENST00000606952 OR2AT4A6NND4 320 aa13.82□□□□□ -0.2
PMF1-206ENST00000606952 TNFRSF13BO14836 293 aaPredicted RBP13.82□□□□□ -0.2
PMF1-206ENST00000606952 DEGS1O15121 323 aa13.82□□□□□ -0.2
PMF1-206ENST00000606952 SSX5O60225 188 aa13.82□□□□□ -0.2
PMF1-206ENST00000606952 CSN2P05814 226 aa13.82□□□□□ -0.2
PMF1-206ENST00000606952 PTHLHP12272 177 aa13.82□□□□□ -0.2
PMF1-206ENST00000606952 CD80P33681 288 aa13.82□□□□□ -0.2
PMF1-206ENST00000606952 MDH2P40926 338 aaKnown RBP13.82□□□□□ -0.2
PMF1-206ENST00000606952 CBX5P45973 191 aa13.82□□□□□ -0.2
PMF1-206ENST00000606952 KCNJ3P48549 501 aa13.82□□□□□ -0.2
PMF1-206ENST00000606952 EFNA4P52798 201 aa13.82□□□□□ -0.2
PMF1-206ENST00000606952 HOXA4Q00056 320 aaPredicted RBP13.82□□□□□ -0.2
PMF1-206ENST00000606952 RBM39Q14498 530 aaKnown RBP13.82□□□□□ -0.2
PMF1-206ENST00000606952 HFEQ30201 348 aa13.82□□□□□ -0.2
PMF1-206ENST00000606952 OLFML2AQ68BL7 652 aa13.82□□□□□ -0.2
PMF1-206ENST00000606952 CD177Q8N6Q3 437 aa13.82□□□□□ -0.2
PMF1-206ENST00000606952 SUMF2Q8NBJ7 301 aa13.82□□□□□ -0.2
PMF1-206ENST00000606952 GCDHQ92947 438 aaPredicted RBP13.82□□□□□ -0.2
PMF1-206ENST00000606952 SDSLQ96GA7 329 aa13.82□□□□□ -0.2
PMF1-206ENST00000606952 OCSTAMPQ9BR26 566 aa13.82□□□□□ -0.2
PMF1-206ENST00000606952 DPCDQ9BVM2 203 aaPredicted RBP13.82□□□□□ -0.2
PMF1-206ENST00000606952 ZMAT3Q9HA38 289 aaKnown RBP13.82□□□□□ -0.2
PMF1-206ENST00000606952 DNAJB11Q9UBS4 358 aa13.82□□□□□ -0.2
PMF1-206ENST00000606952 ELF5Q9UKW6 265 aaPredicted RBP13.82□□□□□ -0.2
PMF1-206ENST00000606952 DCHS2Q6V1P9 2916 aa13.81□□□□□ -0.2
PMF1-206ENST00000606952 PPIAL4EA0A075B759 164 aa13.81□□□□□ -0.2
PMF1-206ENST00000606952 TRAV38-1A0A0B4J264 116 aa13.81□□□□□ -0.2
PMF1-206ENST00000606952 ISPDA4D126 451 aa13.81□□□□□ -0.2
PMF1-206ENST00000606952 RFPL4AA6NLU0 287 aa13.81□□□□□ -0.2
PMF1-206ENST00000606952 PPIAL4DF5H284 164 aa13.81□□□□□ -0.2
PMF1-206ENST00000606952 RFPL4AL1F8VTS6 287 aa13.81□□□□□ -0.2
PMF1-206ENST00000606952 LANCL1O43813 399 aa13.81□□□□□ -0.2
PMF1-206ENST00000606952 ZNF737O75373 536 aa13.81□□□□□ -0.2
PMF1-206ENST00000606952 F12P00748 615 aaPredicted RBP13.81□□□□□ -0.2
PMF1-206ENST00000606952 PPIAL4FP0DN26 164 aa13.81□□□□□ -0.2
PMF1-206ENST00000606952 ZNF44P15621 663 aa13.81□□□□□ -0.2
PMF1-206ENST00000606952 NAT1P18440 290 aa13.81□□□□□ -0.2
PMF1-206ENST00000606952 AMY2BP19961 511 aa13.81□□□□□ -0.2
PMF1-206ENST00000606952 DTYMKP23919 212 aa13.81□□□□□ -0.2
PMF1-206ENST00000606952 DUSP1P28562 367 aa13.81□□□□□ -0.2
PMF1-206ENST00000606952 PRDX2P32119 198 aa13.81□□□□□ -0.2
PMF1-206ENST00000606952 SNU13P55769 128 aaKnown RBP13.81□□□□□ -0.2
PMF1-206ENST00000606952 ACTBP60709 375 aa13.81□□□□□ -0.2
PMF1-206ENST00000606952 ACTG1P63261 375 aa13.81□□□□□ -0.2
PMF1-206ENST00000606952 GUCA2AQ02747 115 aa13.81□□□□□ -0.2
PMF1-206ENST00000606952 MICBQ29980 383 aa13.81□□□□□ -0.2
PMF1-206ENST00000606952 NKAPLQ5M9Q1 402 aa13.81□□□□□ -0.2
PMF1-206ENST00000606952 STEAP3Q658P3 488 aa13.81□□□□□ -0.2
PMF1-206ENST00000606952 CYYR1Q96J86 154 aa13.81□□□□□ -0.2
PMF1-206ENST00000606952 FAAP24Q9BTP7 215 aa13.81□□□□□ -0.2
PMF1-206ENST00000606952 ZNF701Q9NV72 531 aaPredicted RBP13.81□□□□□ -0.2
PMF1-206ENST00000606952 AK3Q9UIJ7 227 aa13.81□□□□□ -0.2
PMF1-206ENST00000606952 PPIAL4AQ9Y536 164 aa13.81□□□□□ -0.2
PMF1-206ENST00000606952 A0A1W2PQ09 198 aa13.8□□□□□ -0.2
PMF1-206ENST00000606952 MCRIP1C9JLW8 97 aa13.8□□□□□ -0.2
PMF1-206ENST00000606952 ORC5O43913 435 aa13.8□□□□□ -0.2
PMF1-206ENST00000606952 NAPSAO96009 420 aa13.8□□□□□ -0.2
PMF1-206ENST00000606952 CD3GP09693 182 aa13.8□□□□□ -0.2
PMF1-206ENST00000606952 COL8A2P25067 703 aa13.8□□□□□ -0.2
PMF1-206ENST00000606952 CDKN1AP38936 164 aa13.8□□□□□ -0.2
PMF1-206ENST00000606952 GDNFP39905 211 aa13.8□□□□□ -0.2
PMF1-206ENST00000606952 GNG2P59768 71 aa13.8□□□□□ -0.2
PMF1-206ENST00000606952 SRSF7Q16629 238 aaKnown RBP eCLIP13.8□□□□□ -0.2
PMF1-206ENST00000606952 FAM201AQ5SY85 155 aa13.8□□□□□ -0.2
PMF1-206ENST00000606952 ATAD3CQ5T2N8 411 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms