RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 ACBD7Q8N6N7 88 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 OR51A4Q8NGJ6 313 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 NDNFQ8TB73 568 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 PYDC1Q8WXC3 89 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 CORO2AQ92828 525 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 RFT1Q96AA3 541 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 SPSB1Q96BD6 273 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 RNFT2Q96EX2 444 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 OPALINQ96PE5 141 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 OR5M11Q96RB7 305 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 OCSTAMPQ9BR26 566 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 CLEC7AQ9BXN2 247 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 MMP28Q9H239 520 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 TMEM133Q9H2Q1 129 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 IMPAD1Q9NX62 359 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 HHLA2Q9UM44 414 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 EXOGQ9Y2C4 368 aaKnown RBP6.12□□□□□ -1.43
CUX1-219ENST00000606749 GSTK1Q9Y2Q3 226 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 UBE2J1Q9Y385 318 aaPredicted RBP6.12□□□□□ -1.43
CUX1-219ENST00000606749 NOTCH1P46531 2555 aa6.12□□□□□ -1.43
CUX1-219ENST00000606749 FUOMA2VDF0 154 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 OR4C45A6NMZ5 311 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 ADARB2-AS1A8MUL3 147 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 H3BUI4 141 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 SIRPB1O00241 398 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 F2RL2O00254 374 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 PEX14O75381 377 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 CIB2O75838 187 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 KDM4BO94953 1096 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 PRB2P02812 416 aaPredicted RBP6.11□□□□□ -1.43
CUX1-219ENST00000606749 HTR1AP08908 422 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 ZNF20P17024 532 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 HTR1DP28221 377 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 GLIPR1P48060 266 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 P2RX3P56373 397 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 BDH1Q02338 343 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 ALKBH1Q13686 389 aaKnown RBP6.11□□□□□ -1.43
CUX1-219ENST00000606749 ZIK1Q3SY52 487 aaPredicted RBP6.11□□□□□ -1.43
CUX1-219ENST00000606749 FBLN7Q53RD9 439 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 OXLD1Q5BKU9 147 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 MEDAGQ5VYS4 303 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 OR52W1Q6IF63 320 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 Q6P435 159 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 HEPN1Q6WQI6 88 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 TRAPPC6BQ86SZ2 158 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 RTN4RL2Q86UN3 420 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 SAXO1Q8IYX7 474 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 OR4P4Q8NGL7 312 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 OR13C3Q8NGS6 347 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 OR10AC1Q8NH08 325 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 STMN2Q93045 179 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 PELI1Q96FA3 418 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 C4orf36Q96KX1 117 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 SPACA5Q96QH8 159 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 CITED2Q99967 270 aaPredicted RBP6.11□□□□□ -1.43
CUX1-219ENST00000606749 COMMD4Q9H0A8 199 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 RHOFQ9HBH0 211 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 EXOSC4Q9NPD3 245 aaKnown RBP6.11□□□□□ -1.43
CUX1-219ENST00000606749 TAS2R3Q9NYW6 316 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 DPM3Q9P2X0 92 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 AASSQ9UDR5 926 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 ORC6Q9Y5N6 252 aa6.11□□□□□ -1.43
CUX1-219ENST00000606749 TRGV10A0A0A0MS01 117 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 H3BNX3 289 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 LY6LH3BQJ8 138 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 EI24O14681 340 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 XPNPEP2O43895 674 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 ALX3O95076 343 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 IGLV1-47P01700 117 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 OCM2P0CE71 109 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 OCMP0CE72 109 aaPredicted RBP6.1□□□□□ -1.43
CUX1-219ENST00000606749 GABRB1P18505 474 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 CDK2P24941 298 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 CD24P25063 80 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 GDNFP39905 211 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 VDAC2P45880 294 aaPredicted RBP6.1□□□□□ -1.43
CUX1-219ENST00000606749 ALDH3A2P51648 485 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 CD83Q01151 205 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 SCN1BQ07699 218 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 AESQ08117 197 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 IL18R1Q13478 541 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 GALEQ14376 348 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 KPNB1Q14974 876 aaKnown RBP6.1□□□□□ -1.43
CUX1-219ENST00000606749 CDK5R1Q15078 307 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 TMEM95Q3KNT9 176 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 ARSJQ5FYB0 599 aaPredicted RBP6.1□□□□□ -1.43
CUX1-219ENST00000606749 PRAMEF5Q5TYX0 476 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 LHFPL3Q86UP9 236 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 SERPINA12Q8IW75 414 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 OR4F17Q8NGA8 305 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 OR5AU1Q8NGC0 362 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 OR5D18Q8NGL1 313 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 OR5D14Q8NGL3 314 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 ZNF596Q8TC21 504 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 R3HDM4Q96D70 268 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 LGALS12Q96DT0 336 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 OR4F4Q96R69 305 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 ZNF649Q9BS31 505 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 GAL3ST2Q9H3Q3 398 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 ZCCHC4Q9H5U6 513 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms