RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 DTX1Q86Y01 620 aa7.74□□□□□ -1.17
COMMD3-215ENST00000602574 ADAD2Q8NCV1 583 aaKnown RBP7.74□□□□□ -1.17
COMMD3-215ENST00000602574 OR13G1Q8NGZ3 307 aa7.74□□□□□ -1.17
COMMD3-215ENST00000602574 UBTD2Q8WUN7 234 aa7.74□□□□□ -1.17
COMMD3-215ENST00000602574 APOBEC4Q8WW27 367 aaKnown RBP7.74□□□□□ -1.17
COMMD3-215ENST00000602574 GRAMD2BQ96HH9 432 aa7.74□□□□□ -1.17
COMMD3-215ENST00000602574 TIMP4Q99727 224 aa7.74□□□□□ -1.17
COMMD3-215ENST00000602574 EFCAB11Q9BUY7 163 aa7.74□□□□□ -1.17
COMMD3-215ENST00000602574 REPIN1Q9BWE0 567 aaKnown RBP7.74□□□□□ -1.17
COMMD3-215ENST00000602574 ZDHHC11Q9H8X9 412 aa7.74□□□□□ -1.17
COMMD3-215ENST00000602574 HSF4Q9ULV5 492 aa7.74□□□□□ -1.17
COMMD3-215ENST00000602574 ATG2AQ2TAZ0 1938 aa7.74□□□□□ -1.17
COMMD3-215ENST00000602574 THSD7BQ9C0I4 1608 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 C1orf226A1L170 272 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 EEF1E1-BLOC1S5C9J1V9 151 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 DIRC3C9JPN6 131 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 HRASP01112 189 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 HLA-HP01893 362 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 SLURP2P0DP57 97 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 ADH5P11766 374 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 PTHLHP12272 177 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 ACVR1BP36896 505 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 P2RY1P47900 373 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 LSSP48449 732 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 GFRA1P56159 465 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 TIAL1Q01085 375 aaKnown RBP eCLIP7.73□□□□□ -1.17
COMMD3-215ENST00000602574 NFATC4Q14934 902 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 NR0B2Q15466 257 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 IL22RA1Q8N6P7 574 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 CYB561D1Q8N8Q1 229 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 PIGTQ969N2 578 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 RTBDNQ9BSG5 229 aaPredicted RBP7.73□□□□□ -1.17
COMMD3-215ENST00000602574 PIMREGQ9BSJ6 248 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 OR5V1Q9UGF6 321 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 CRLS1Q9UJA2 301 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 ERRFI1Q9UJM3 462 aaPredicted RBP7.73□□□□□ -1.17
COMMD3-215ENST00000602574 PLAGL1Q9UM63 463 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 RAB29O14966 203 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 CLDN1O95832 211 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 NUDT3O95989 172 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 IGHG3P01860 377 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 CDKN1AP38936 164 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 ZNF83P51522 516 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 PCBP3P57721 371 aaKnown RBP7.73□□□□□ -1.17
COMMD3-215ENST00000602574 PPP1R1AQ13522 171 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 BVES-AS1Q5T3Y7 98 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 EEF1DP3Q658K8 133 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 FCRL6Q6DN72 434 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 SLC18B1Q6NT16 456 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 TMEM184AQ6ZMB5 413 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 POC1AQ8NBT0 407 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 TMEM37Q8WXS4 190 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 RNF183Q96D59 192 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 HSPB9Q9BQS6 159 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 AGMATQ9BSE5 352 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 GPR174Q9BXC1 333 aa7.73□□□□□ -1.17
COMMD3-215ENST00000602574 TRAV8-6A0A0B4J262 113 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 ANTXRLA6NF34 631 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 KIR2DS3K7RE56 304 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 TAPBPO15533 448 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 DUX1O43812 170 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 PRICKLE3O43900 615 aaPredicted RBP7.72□□□□□ -1.17
COMMD3-215ENST00000602574 MPZL1O95297 269 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 SFT2D2O95562 160 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 HLA-DRB1P01911 266 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 HBE1P02100 147 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 CD3DP04234 171 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 ACP5P13686 325 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 EPORP19235 508 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 GATA3P23771 443 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 PPP1CCP36873 323 aaKnown RBP7.72□□□□□ -1.17
COMMD3-215ENST00000602574 OR1E2P47887 323 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 MFAP4P55083 255 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 RPL15P61313 204 aaKnown RBP7.72□□□□□ -1.17
COMMD3-215ENST00000602574 ELAVL3Q14576 367 aaKnown RBP7.72□□□□□ -1.17
COMMD3-215ENST00000602574 KIR2DS3Q14952 304 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 DAZLQ92904 295 aaKnown RBP7.72□□□□□ -1.17
COMMD3-215ENST00000602574 RAB8BQ92930 207 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 EID2BQ96D98 161 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 C2orf50Q96LR7 162 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 DUX5Q96PT3 197 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 TRIB3Q96RU7 358 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 RARRES2Q99969 163 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 ISG20L2Q9H9L3 353 aaKnown RBP7.72□□□□□ -1.17
COMMD3-215ENST00000602574 LYRM4Q9HD34 91 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 SLC2A6Q9UGQ3 507 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 A0A087WX48 190 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 FAM227AF5H4B4 570 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 F2RL2O00254 374 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 FFAR1O14842 300 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 LILRA1O75019 489 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 FOXH1O75593 365 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 TNFRSF1BP20333 461 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 APOBEC1P41238 236 aaKnown RBP7.72□□□□□ -1.17
COMMD3-215ENST00000602574 ELOCQ15369 112 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 MSMO1Q15800 293 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 PRICKLE4Q2TBC4 344 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 CPTPQ5TA50 214 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 FAM90A2PQ658T7 463 aa7.72□□□□□ -1.17
COMMD3-215ENST00000602574 TEX26Q8N6G2 289 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms