RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 NBASA2RRP1 2371 aa10.04□□□□□ -0.8
VRK3-223ENST00000601341 IGSF10Q6WRI0 2623 aa10.04□□□□□ -0.8
VRK3-223ENST00000601341 EPG5Q9HCE0 2579 aa10.04□□□□□ -0.8
VRK3-223ENST00000601341 SFT2D2O95562 160 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 CSN2P05814 226 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 WNT5AP41221 380 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 ASCL1P50553 236 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 TAGLNQ01995 201 aaKnown RBP10.03□□□□□ -0.8
VRK3-223ENST00000601341 ZNF92Q03936 586 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 TLE1Q04724 770 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 C3orf36Q3SXR2 165 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 CRIP3Q6Q6R5 217 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 UNQ6126/PRO20091Q6UXV3 157 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 C17orf107Q6ZR85 190 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 MYPOPQ86VE0 399 aaPredicted RBP10.03□□□□□ -0.8
VRK3-223ENST00000601341 STPG2Q8N412 459 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 PXT1Q8NFP0 134 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 SEMA6DQ8NFY4 1073 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 EMG1Q92979 244 aaKnown RBP10.03□□□□□ -0.8
VRK3-223ENST00000601341 S100A13Q99584 98 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 OPA3Q9H6K4 179 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 FN3KRPQ9HA64 309 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 TEX13DA0A0J9YY54 714 aaPredicted RBP10.03□□□□□ -0.8
VRK3-223ENST00000601341 F8VVB4 439 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 F8VWA3 439 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 SPDEFO95238 335 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 NGFP01138 241 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 PMP2P02689 132 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 RLN2P04090 185 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 PET100P0DJ07 73 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 PRKACBP22694 351 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 VAMP1P23763 118 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 ADORA2A-AS1P86434 159 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 ARFRP1Q13795 201 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 PAN3Q58A45 887 aaKnown RBP10.03□□□□□ -0.8
VRK3-223ENST00000601341 OR5AP2Q8NGF4 316 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 OR51T1Q8NGJ9 327 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 PRR7Q8TB68 274 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 MARCH1Q8TCQ1 289 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 MRPS24Q96EL2 167 aaKnown RBP10.03□□□□□ -0.8
VRK3-223ENST00000601341 CCDC120Q96HB5 630 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 ARHGAP5-AS1Q96IT6 56 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 TECTBQ96PL2 329 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 VRK1Q99986 396 aaPredicted RBP10.03□□□□□ -0.8
VRK3-223ENST00000601341 ARPC5LQ9BPX5 153 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 C5orf66Q9H5L9 145 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 CHMP1AQ9HD42 196 aaPredicted RBP10.03□□□□□ -0.8
VRK3-223ENST00000601341 DECR2Q9NUI1 292 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 ZNF230Q9UIE0 474 aaPredicted RBP10.03□□□□□ -0.8
VRK3-223ENST00000601341 ERRFI1Q9UJM3 462 aaPredicted RBP10.03□□□□□ -0.8
VRK3-223ENST00000601341 HSF4Q9ULV5 492 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 STARD10Q9Y365 291 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 SPEF1Q9Y4P9 236 aa10.03□□□□□ -0.8
VRK3-223ENST00000601341 IGHV1-18A0A0C4DH31 117 aa10.02□□□□□ -0.81
VRK3-223ENST00000601341 hCG_38984A0A1B0GV85 526 aa10.02□□□□□ -0.81
VRK3-223ENST00000601341 NUDT19A8MXV4 375 aa10.02□□□□□ -0.81
VRK3-223ENST00000601341 CECR9P0C854 216 aa10.02□□□□□ -0.81
VRK3-223ENST00000601341 AMY2BP19961 511 aa10.02□□□□□ -0.81
VRK3-223ENST00000601341 CCKARP32238 428 aa10.02□□□□□ -0.81
VRK3-223ENST00000601341 ATP1B3P54709 279 aa10.02□□□□□ -0.81
VRK3-223ENST00000601341 FAM3AP98173 230 aa10.02□□□□□ -0.81
VRK3-223ENST00000601341 UBE2V2Q15819 145 aa10.02□□□□□ -0.81
VRK3-223ENST00000601341 FBXL19-AS1Q494R0 122 aa10.02□□□□□ -0.81
VRK3-223ENST00000601341 SLC22A6Q4U2R8 563 aa10.02□□□□□ -0.81
VRK3-223ENST00000601341 UQCC3Q6UW78 93 aa10.02□□□□□ -0.81
VRK3-223ENST00000601341 ASCL4Q6XD76 172 aa10.02□□□□□ -0.81
VRK3-223ENST00000601341 MRPL21Q7Z2W9 205 aaKnown RBP10.02□□□□□ -0.81
VRK3-223ENST00000601341 ADAD2Q8NCV1 583 aaKnown RBP10.02□□□□□ -0.81
VRK3-223ENST00000601341 LRRC46Q96FV0 321 aa10.02□□□□□ -0.81
VRK3-223ENST00000601341 CXorf58Q96LI9 332 aa10.02□□□□□ -0.81
VRK3-223ENST00000601341 SPACA5Q96QH8 159 aa10.02□□□□□ -0.81
VRK3-223ENST00000601341 REPIN1Q9BWE0 567 aaKnown RBP10.02□□□□□ -0.81
VRK3-223ENST00000601341 PECRQ9BY49 303 aa10.02□□□□□ -0.81
VRK3-223ENST00000601341 DNAJB11Q9UBS4 358 aa10.02□□□□□ -0.81
VRK3-223ENST00000601341 PIGLQ9Y2B2 252 aa10.02□□□□□ -0.81
VRK3-223ENST00000601341 TMA7Q9Y2S6 64 aaKnown RBP10.02□□□□□ -0.81
VRK3-223ENST00000601341 FAHP16930 419 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 AKR1C4P17516 323 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 GNLYP22749 145 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 DTYMKP23919 212 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 ZNF83P51522 516 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 UCP2P55851 309 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 CNN3Q15417 329 aaKnown RBP10.01□□□□□ -0.81
VRK3-223ENST00000601341 OR8B8Q15620 311 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 ALKBH2Q6NS38 261 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 CA5BP1Q8WTZ4 195 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 PCNPQ8WW12 178 aaKnown RBP10.01□□□□□ -0.81
VRK3-223ENST00000601341 Q96M66 194 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 BANF2Q9H503 90 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 PCDHB16Q9NRJ7 776 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 IL36GQ9NZH8 169 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 MYO7BQ6PIF6 2116 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 PCNX1Q96RV3 2341 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 IGHV2OR16-5A0A0B4J2B6 119 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 RAB19A4D1S5 217 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 FAM90A27PA6NNH2 459 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 TEX46H3BTG2 121 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 M0R1B8 84 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 SMPD2O60906 423 aa10.01□□□□□ -0.81
VRK3-223ENST00000601341 TUBG1P23258 451 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms