RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 TMEM225BP0DP42 221 aa12.88□□□□□ -0.35
RPS28-203ENST00000600659 SPHARQ15513 63 aa12.88□□□□□ -0.35
RPS28-203ENST00000600659 DDI2Q5TDH0 399 aa12.88□□□□□ -0.35
RPS28-203ENST00000600659 CMTM4Q8IZR5 234 aa12.88□□□□□ -0.35
RPS28-203ENST00000600659 TNFAIP8L1Q8WVP5 186 aa12.88□□□□□ -0.35
RPS28-203ENST00000600659 AJUBAQ96IF1 538 aa12.88□□□□□ -0.35
RPS28-203ENST00000600659 CNBD2Q96M20 576 aa12.88□□□□□ -0.35
RPS28-203ENST00000600659 JMJD8Q96S16 334 aa12.88□□□□□ -0.35
RPS28-203ENST00000600659 CHST6Q9GZX3 395 aa12.88□□□□□ -0.35
RPS28-203ENST00000600659 METTL8Q9H825 291 aaKnown RBP12.88□□□□□ -0.35
RPS28-203ENST00000600659 NEK6Q9HC98 313 aa12.88□□□□□ -0.35
RPS28-203ENST00000600659 TMEM138Q9NPI0 162 aa12.88□□□□□ -0.35
RPS28-203ENST00000600659 TPRKBQ9Y3C4 175 aa12.88□□□□□ -0.35
RPS28-203ENST00000600659 TENM1Q9UKZ4 2725 aa12.87□□□□□ -0.35
RPS28-203ENST00000600659 A0A1W2PPK0 400 aa12.87□□□□□ -0.35
RPS28-203ENST00000600659 MEX3AA1L020 520 aaKnown RBP12.87□□□□□ -0.35
RPS28-203ENST00000600659 C17orf98A8MV24 154 aa12.87□□□□□ -0.35
RPS28-203ENST00000600659 CLDN34H7C241 214 aa12.87□□□□□ -0.35
RPS28-203ENST00000600659 SIRPB1O00241 398 aa12.87□□□□□ -0.35
RPS28-203ENST00000600659 BDKRB2P30411 391 aa12.87□□□□□ -0.35
RPS28-203ENST00000600659 SLC9A3R2Q15599 337 aa12.87□□□□□ -0.35
RPS28-203ENST00000600659 UNQ9370/PRO34162Q6UXP9 181 aa12.87□□□□□ -0.35
RPS28-203ENST00000600659 Q6YL49 198 aa12.87□□□□□ -0.35
RPS28-203ENST00000600659 TPRX1Q8N7U7 411 aa12.87□□□□□ -0.35
RPS28-203ENST00000600659 OR51T1Q8NGJ9 327 aa12.87□□□□□ -0.35
RPS28-203ENST00000600659 OR10K1Q8NGX5 313 aa12.87□□□□□ -0.35
RPS28-203ENST00000600659 IL36GQ9NZH8 169 aa12.87□□□□□ -0.35
RPS28-203ENST00000600659 ZNF581Q9P0T4 197 aa12.87□□□□□ -0.35
RPS28-203ENST00000600659 TRIM77I1YAP6 450 aa12.86□□□□□ -0.35
RPS28-203ENST00000600659 SLC33A1O00400 549 aaPredicted RBP12.86□□□□□ -0.35
RPS28-203ENST00000600659 RGS10O43665 173 aa12.86□□□□□ -0.35
RPS28-203ENST00000600659 RNASE1P07998 156 aaKnown RBP12.86□□□□□ -0.35
RPS28-203ENST00000600659 MELTFP08582 738 aa12.86□□□□□ -0.35
RPS28-203ENST00000600659 ZNF93P35789 620 aaPredicted RBP12.86□□□□□ -0.35
RPS28-203ENST00000600659 PTGFRP43088 359 aa12.86□□□□□ -0.35
RPS28-203ENST00000600659 MTNR1BP49286 362 aa12.86□□□□□ -0.35
RPS28-203ENST00000600659 UBE2E1P51965 193 aa12.86□□□□□ -0.35
RPS28-203ENST00000600659 PPP3R1P63098 170 aa12.86□□□□□ -0.35
RPS28-203ENST00000600659 BAMBIQ13145 260 aa12.86□□□□□ -0.35
RPS28-203ENST00000600659 GRK1Q15835 563 aa12.86□□□□□ -0.35
RPS28-203ENST00000600659 FIP1L1Q6UN15 594 aaKnown RBP12.86□□□□□ -0.35
RPS28-203ENST00000600659 PRSS48Q7RTY5 328 aa12.86□□□□□ -0.35
RPS28-203ENST00000600659 SATL1Q86VE3 508 aa12.86□□□□□ -0.35
RPS28-203ENST00000600659 LDLRAD3Q86YD5 345 aa12.86□□□□□ -0.35
RPS28-203ENST00000600659 ZNF184Q99676 751 aaPredicted RBP12.86□□□□□ -0.35
RPS28-203ENST00000600659 PPIL3Q9H2H8 161 aaKnown RBP12.86□□□□□ -0.35
RPS28-203ENST00000600659 EXOSC4Q9NPD3 245 aaKnown RBP12.86□□□□□ -0.35
RPS28-203ENST00000600659 NOX4Q9NPH5 578 aa12.86□□□□□ -0.35
RPS28-203ENST00000600659 FOXJ3Q9UPW0 622 aa12.86□□□□□ -0.35
RPS28-203ENST00000600659 RRP15Q9Y3B9 282 aaKnown RBP12.86□□□□□ -0.35
RPS28-203ENST00000600659 A0A0G2JK05 382 aa12.85□□□□□ -0.35
RPS28-203ENST00000600659 A0A1W2PP11 408 aa12.85□□□□□ -0.35
RPS28-203ENST00000600659 A0A1W2PRD5 423 aa12.85□□□□□ -0.35
RPS28-203ENST00000600659 A0A1W2PRF3 423 aa12.85□□□□□ -0.35
RPS28-203ENST00000600659 A0A1W2PRM7 423 aa12.85□□□□□ -0.35
RPS28-203ENST00000600659 MGST3O14880 152 aa12.85□□□□□ -0.35
RPS28-203ENST00000600659 NPFFO15130 113 aa12.85□□□□□ -0.35
RPS28-203ENST00000600659 HOXA3O43365 443 aaPredicted RBP12.85□□□□□ -0.35
RPS28-203ENST00000600659 CDRT1O95170 752 aa12.85□□□□□ -0.35
RPS28-203ENST00000600659 ERP29P30040 261 aaKnown RBP12.85□□□□□ -0.35
RPS28-203ENST00000600659 TGFBR2P37173 567 aa12.85□□□□□ -0.35
RPS28-203ENST00000600659 MAP2K4P45985 399 aa12.85□□□□□ -0.35
RPS28-203ENST00000600659 EDDM3BP56851 147 aa12.85□□□□□ -0.35
RPS28-203ENST00000600659 EDDM3AQ14507 147 aa12.85□□□□□ -0.35
RPS28-203ENST00000600659 MED22Q15528 200 aa12.85□□□□□ -0.35
RPS28-203ENST00000600659 PIGYQ3MUY2 71 aa12.85□□□□□ -0.35
RPS28-203ENST00000600659 RBM48Q5RL73 367 aaKnown RBP12.85□□□□□ -0.35
RPS28-203ENST00000600659 FAM27D1Q5T7N8 215 aa12.85□□□□□ -0.35
RPS28-203ENST00000600659 GDPD3Q7L5L3 318 aa12.85□□□□□ -0.35
RPS28-203ENST00000600659 OR5D13Q8NGL4 314 aa12.85□□□□□ -0.35
RPS28-203ENST00000600659 C17orf50Q8WW18 174 aa12.85□□□□□ -0.35
RPS28-203ENST00000600659 CPNE2Q96FN4 548 aaPredicted RBP12.85□□□□□ -0.35
RPS28-203ENST00000600659 COQ2Q96H96 371 aa12.85□□□□□ -0.35
RPS28-203ENST00000600659 GPER1Q99527 375 aa12.85□□□□□ -0.35
RPS28-203ENST00000600659 FAM192AQ9GZU8 254 aa12.85□□□□□ -0.35
RPS28-203ENST00000600659 PPA2Q9H2U2 334 aa12.85□□□□□ -0.35
RPS28-203ENST00000600659 TRAV24A0A0B4J272 114 aa12.84□□□□□ -0.35
RPS28-203ENST00000600659 TMEM89A2RUT3 159 aa12.84□□□□□ -0.35
RPS28-203ENST00000600659 SH2D1BO14796 132 aa12.84□□□□□ -0.35
RPS28-203ENST00000600659 MAGEB3O15480 346 aa12.84□□□□□ -0.35
RPS28-203ENST00000600659 CSN2P05814 226 aa12.84□□□□□ -0.35
RPS28-203ENST00000600659 GABRR1P24046 479 aa12.84□□□□□ -0.35
RPS28-203ENST00000600659 SAA4P35542 130 aa12.84□□□□□ -0.35
RPS28-203ENST00000600659 P2RX3P56373 397 aa12.84□□□□□ -0.35
RPS28-203ENST00000600659 GUCA2AQ02747 115 aa12.84□□□□□ -0.35
RPS28-203ENST00000600659 MEF2CQ06413 473 aaPredicted RBP12.84□□□□□ -0.35
RPS28-203ENST00000600659 IL13RA2Q14627 380 aa12.84□□□□□ -0.35
RPS28-203ENST00000600659 ACSM3Q53FZ2 586 aa12.84□□□□□ -0.35
RPS28-203ENST00000600659 NHLRC3Q5JS37 347 aa12.84□□□□□ -0.35
RPS28-203ENST00000600659 NCR3LG1Q68D85 454 aa12.84□□□□□ -0.35
RPS28-203ENST00000600659 RBMS3Q6XE24 437 aaKnown RBP12.84□□□□□ -0.35
RPS28-203ENST00000600659 TAF15Q92804 592 aaKnown RBP eCLIP12.84□□□□□ -0.35
RPS28-203ENST00000600659 ZMAT3Q9HA38 289 aaKnown RBP12.84□□□□□ -0.35
RPS28-203ENST00000600659 ZNRD1Q9P1U0 126 aa12.84□□□□□ -0.35
RPS28-203ENST00000600659 SF3B6Q9Y3B4 125 aaKnown RBP12.84□□□□□ -0.35
RPS28-203ENST00000600659 LINC00312Q9Y6C7 94 aa12.84□□□□□ -0.35
RPS28-203ENST00000600659 DENRO43583 198 aaKnown RBP12.83□□□□□ -0.36
RPS28-203ENST00000600659 RBP4P02753 201 aa12.83□□□□□ -0.36
RPS28-203ENST00000600659 ZNF728P0DKX0 622 aa12.83□□□□□ -0.36
RPS28-203ENST00000600659 ZNF44P15621 663 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms