RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 P2RX3P56373 397 aa14.11□□□□□ -0.15
SHKBP1-223ENST00000600552 CDC42P60953 191 aa14.11□□□□□ -0.15
SHKBP1-223ENST00000600552 AESQ08117 197 aa14.11□□□□□ -0.15
SHKBP1-223ENST00000600552 KPNB1Q14974 876 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-223ENST00000600552 C9orf152Q5JTZ5 239 aa14.11□□□□□ -0.15
SHKBP1-223ENST00000600552 KPRPQ5T749 579 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-223ENST00000600552 TMEM244Q5VVB8 128 aa14.11□□□□□ -0.15
SHKBP1-223ENST00000600552 CCDC121Q6ZUS5 278 aa14.11□□□□□ -0.15
SHKBP1-223ENST00000600552 RNF144BQ7Z419 303 aa14.11□□□□□ -0.15
SHKBP1-223ENST00000600552 OR2G2Q8NGZ5 317 aa14.11□□□□□ -0.15
SHKBP1-223ENST00000600552 RNFT2Q96EX2 444 aa14.11□□□□□ -0.15
SHKBP1-223ENST00000600552 OPALINQ96PE5 141 aa14.11□□□□□ -0.15
SHKBP1-223ENST00000600552 TRGV10A0A0A0MS01 117 aa14.1□□□□□ -0.15
SHKBP1-223ENST00000600552 ADARB2-AS1A8MUL3 147 aa14.1□□□□□ -0.15
SHKBP1-223ENST00000600552 J3QLW9 94 aa14.1□□□□□ -0.15
SHKBP1-223ENST00000600552 OR2H2O95918 312 aa14.1□□□□□ -0.15
SHKBP1-223ENST00000600552 HTR1AP08908 422 aa14.1□□□□□ -0.15
SHKBP1-223ENST00000600552 PF4V1P10720 104 aa14.1□□□□□ -0.15
SHKBP1-223ENST00000600552 ZNF44P15621 663 aa14.1□□□□□ -0.15
SHKBP1-223ENST00000600552 ZNF19P17023 458 aa14.1□□□□□ -0.15
SHKBP1-223ENST00000600552 GLIPR1P48060 266 aa14.1□□□□□ -0.15
SHKBP1-223ENST00000600552 BNIP1Q12981 228 aa14.1□□□□□ -0.15
SHKBP1-223ENST00000600552 PDZK1IP1Q13113 114 aa14.1□□□□□ -0.15
SHKBP1-223ENST00000600552 IL18R1Q13478 541 aa14.1□□□□□ -0.15
SHKBP1-223ENST00000600552 RBM39Q14498 530 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-223ENST00000600552 ZIK1Q3SY52 487 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-223ENST00000600552 KHDC1LQ5JSQ8 128 aa14.1□□□□□ -0.15
SHKBP1-223ENST00000600552 ZBTB49Q6ZSB9 765 aa14.1□□□□□ -0.15
SHKBP1-223ENST00000600552 LHFPL2Q6ZUX7 228 aa14.1□□□□□ -0.15
SHKBP1-223ENST00000600552 DNAAF1Q8NEP3 725 aa14.1□□□□□ -0.15
SHKBP1-223ENST00000600552 OR13C3Q8NGS6 347 aa14.1□□□□□ -0.15
SHKBP1-223ENST00000600552 OR13C9Q8NGT0 318 aa14.1□□□□□ -0.15
SHKBP1-223ENST00000600552 OR10AC1Q8NH08 325 aa14.1□□□□□ -0.15
SHKBP1-223ENST00000600552 CENPNQ96H22 339 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-223ENST00000600552 WNT10AQ9GZT5 417 aa14.1□□□□□ -0.15
SHKBP1-223ENST00000600552 HMG20AQ9NP66 347 aa14.1□□□□□ -0.15
SHKBP1-223ENST00000600552 FRRS1LQ9P0K9 344 aa14.1□□□□□ -0.15
SHKBP1-223ENST00000600552 UBE2J1Q9Y385 318 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-223ENST00000600552 TCRBV4S1A1TA0A5B7 111 aa14.09□□□□□ -0.15
SHKBP1-223ENST00000600552 TOR1AO14656 332 aa14.09□□□□□ -0.15
SHKBP1-223ENST00000600552 CIB2O75838 187 aa14.09□□□□□ -0.15
SHKBP1-223ENST00000600552 IGLL1P15814 213 aa14.09□□□□□ -0.15
SHKBP1-223ENST00000600552 BRS3P32247 399 aa14.09□□□□□ -0.15
SHKBP1-223ENST00000600552 GDNFP39905 211 aa14.09□□□□□ -0.15
SHKBP1-223ENST00000600552 DYNLT3P51808 116 aa14.09□□□□□ -0.15
SHKBP1-223ENST00000600552 LOXL3P58215 753 aa14.09□□□□□ -0.15
SHKBP1-223ENST00000600552 NANOS3P60323 173 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-223ENST00000600552 ABCA11PQ4W5N1 156 aa14.09□□□□□ -0.15
SHKBP1-223ENST00000600552 REC114Q7Z4M0 266 aa14.09□□□□□ -0.15
SHKBP1-223ENST00000600552 OR4P4Q8NGL7 312 aa14.09□□□□□ -0.15
SHKBP1-223ENST00000600552 PHF21AQ96BD5 680 aa14.09□□□□□ -0.15
SHKBP1-223ENST00000600552 C10orf35Q96D05 121 aa14.09□□□□□ -0.15
SHKBP1-223ENST00000600552 GABARAPL3Q9BY60 117 aa14.09□□□□□ -0.15
SHKBP1-223ENST00000600552 GAL3ST2Q9H3Q3 398 aa14.09□□□□□ -0.15
SHKBP1-223ENST00000600552 NECAP2Q9NVZ3 263 aa14.09□□□□□ -0.15
SHKBP1-223ENST00000600552 DPM3Q9P2X0 92 aa14.09□□□□□ -0.15
SHKBP1-223ENST00000600552 AASSQ9UDR5 926 aa14.09□□□□□ -0.15
SHKBP1-223ENST00000600552 PCDHGB5Q9Y5G0 923 aa14.09□□□□□ -0.15
SHKBP1-223ENST00000600552 IGKV1-12A0A0C4DH73 117 aa14.08□□□□□ -0.16
SHKBP1-223ENST00000600552 ALX3O95076 343 aa14.08□□□□□ -0.16
SHKBP1-223ENST00000600552 IGKV1D-12P01611 117 aa14.08□□□□□ -0.16
SHKBP1-223ENST00000600552 LPLP06858 475 aa14.08□□□□□ -0.16
SHKBP1-223ENST00000600552 NFYBP25208 207 aa14.08□□□□□ -0.16
SHKBP1-223ENST00000600552 OR3A4PP47883 348 aa14.08□□□□□ -0.16
SHKBP1-223ENST00000600552 RASSF2P50749 326 aa14.08□□□□□ -0.16
SHKBP1-223ENST00000600552 TMED1Q13445 227 aa14.08□□□□□ -0.16
SHKBP1-223ENST00000600552 ZNF146Q15072 292 aa14.08□□□□□ -0.16
SHKBP1-223ENST00000600552 SPIN3Q5JUX0 258 aa14.08□□□□□ -0.16
SHKBP1-223ENST00000600552 OR52W1Q6IF63 320 aa14.08□□□□□ -0.16
SHKBP1-223ENST00000600552 OR51A4Q8NGJ6 313 aa14.08□□□□□ -0.16
SHKBP1-223ENST00000600552 RNF166Q96A37 237 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-223ENST00000600552 NR1H4Q96RI1 486 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-223ENST00000600552 OCSTAMPQ9BR26 566 aa14.08□□□□□ -0.16
SHKBP1-223ENST00000600552 SLC25A33Q9BSK2 321 aa14.08□□□□□ -0.16
SHKBP1-223ENST00000600552 OSBPL10Q9BXB5 764 aa14.08□□□□□ -0.16
SHKBP1-223ENST00000600552 AURKAIP1Q9NWT8 199 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-223ENST00000600552 HHLA2Q9UM44 414 aa14.08□□□□□ -0.16
SHKBP1-223ENST00000600552 ORC6Q9Y5N6 252 aa14.08□□□□□ -0.16
SHKBP1-223ENST00000600552 FUOMA2VDF0 154 aa14.07□□□□□ -0.16
SHKBP1-223ENST00000600552 FAM90A22PA8MWA6 464 aa14.07□□□□□ -0.16
SHKBP1-223ENST00000600552 LEUTXA8MZ59 168 aa14.07□□□□□ -0.16
SHKBP1-223ENST00000600552 HSPB6O14558 160 aa14.07□□□□□ -0.16
SHKBP1-223ENST00000600552 DEGS1O15121 323 aa14.07□□□□□ -0.16
SHKBP1-223ENST00000600552 SLC16A6O15403 523 aa14.07□□□□□ -0.16
SHKBP1-223ENST00000600552 MPIG6BO95866 241 aa14.07□□□□□ -0.16
SHKBP1-223ENST00000600552 PF4P02776 101 aa14.07□□□□□ -0.16
SHKBP1-223ENST00000600552 HCKP08631 526 aa14.07□□□□□ -0.16
SHKBP1-223ENST00000600552 TMEM225BP0DP42 221 aa14.07□□□□□ -0.16
SHKBP1-223ENST00000600552 ISL1P61371 349 aa14.07□□□□□ -0.16
SHKBP1-223ENST00000600552 ATXN7L3Q14CW9 347 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-223ENST00000600552 KRBOX4Q5JUW0 171 aa14.07□□□□□ -0.16
SHKBP1-223ENST00000600552 FOXB2Q5VYV0 432 aa14.07□□□□□ -0.16
SHKBP1-223ENST00000600552 UTS2BQ765I0 119 aa14.07□□□□□ -0.16
SHKBP1-223ENST00000600552 ZNF596Q8TC21 504 aa14.07□□□□□ -0.16
SHKBP1-223ENST00000600552 WIPF2Q8TF74 440 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-223ENST00000600552 PYDC1Q8WXC3 89 aa14.07□□□□□ -0.16
SHKBP1-223ENST00000600552 SPSB1Q96BD6 273 aa14.07□□□□□ -0.16
SHKBP1-223ENST00000600552 AKR1E2Q96JD6 320 aa14.07□□□□□ -0.16
SHKBP1-223ENST00000600552 HRASLS5Q96KN8 279 aa14.07□□□□□ -0.16
SHKBP1-223ENST00000600552 ZNF286AQ9HBT8 521 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms