RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 PRAMEF6Q5VXH4 476 aa12.88□□□□□ -0.35
HIF3A-218ENST00000600383 OVCH2Q7RTZ1 564 aa12.88□□□□□ -0.35
HIF3A-218ENST00000600383 TCTE3Q8IZS6 198 aa12.88□□□□□ -0.35
HIF3A-218ENST00000600383 CHIAQ9BZP6 476 aa12.88□□□□□ -0.35
HIF3A-218ENST00000600383 CXXC4Q9H2H0 198 aa12.88□□□□□ -0.35
HIF3A-218ENST00000600383 C12orf4Q9NQ89 552 aa12.88□□□□□ -0.35
HIF3A-218ENST00000600383 ADGRG4Q8IZF6 3080 aa12.88□□□□□ -0.35
HIF3A-218ENST00000600383 TMEM210A6NLX4 147 aa12.88□□□□□ -0.35
HIF3A-218ENST00000600383 HOXA4Q00056 320 aaPredicted RBP12.88□□□□□ -0.35
HIF3A-218ENST00000600383 BAMBIQ13145 260 aa12.88□□□□□ -0.35
HIF3A-218ENST00000600383 SNTB1Q13884 538 aaKnown RBP12.88□□□□□ -0.35
HIF3A-218ENST00000600383 ZMYND11Q15326 602 aa12.88□□□□□ -0.35
HIF3A-218ENST00000600383 KCNJ8Q15842 424 aa12.88□□□□□ -0.35
HIF3A-218ENST00000600383 MPV17LQ2QL34 196 aa12.88□□□□□ -0.35
HIF3A-218ENST00000600383 C3orf36Q3SXR2 165 aa12.88□□□□□ -0.35
HIF3A-218ENST00000600383 NHLRC3Q5JS37 347 aa12.88□□□□□ -0.35
HIF3A-218ENST00000600383 TMEM108Q6UXF1 575 aa12.88□□□□□ -0.35
HIF3A-218ENST00000600383 NOXA1Q86UR1 476 aa12.88□□□□□ -0.35
HIF3A-218ENST00000600383 SUMF2Q8NBJ7 301 aa12.88□□□□□ -0.35
HIF3A-218ENST00000600383 ST6GALNAC3Q8NDV1 305 aa12.88□□□□□ -0.35
HIF3A-218ENST00000600383 GTF3AQ92664 365 aaKnown RBP12.88□□□□□ -0.35
HIF3A-218ENST00000600383 FAM122AQ96E09 287 aa12.88□□□□□ -0.35
HIF3A-218ENST00000600383 ALX4Q9H161 411 aaPredicted RBP12.88□□□□□ -0.35
HIF3A-218ENST00000600383 FN3KRPQ9HA64 309 aa12.88□□□□□ -0.35
HIF3A-218ENST00000600383 MGAT4CQ9UBM8 478 aa12.88□□□□□ -0.35
HIF3A-218ENST00000600383 EDARQ9UNE0 448 aa12.88□□□□□ -0.35
HIF3A-218ENST00000600383 PRSS44E7EML9 344 aa12.87□□□□□ -0.35
HIF3A-218ENST00000600383 DEGS1O15121 323 aa12.87□□□□□ -0.35
HIF3A-218ENST00000600383 ANXA3P12429 323 aa12.87□□□□□ -0.35
HIF3A-218ENST00000600383 DTYMKP23919 212 aa12.87□□□□□ -0.35
HIF3A-218ENST00000600383 CA7P43166 264 aa12.87□□□□□ -0.35
HIF3A-218ENST00000600383 KLF3P57682 345 aaPredicted RBP12.87□□□□□ -0.35
HIF3A-218ENST00000600383 NKX6-1P78426 367 aaPredicted RBP12.87□□□□□ -0.35
HIF3A-218ENST00000600383 CDK10Q15131 360 aa12.87□□□□□ -0.35
HIF3A-218ENST00000600383 SLC22A25Q6T423 547 aa12.87□□□□□ -0.35
HIF3A-218ENST00000600383 SEZ6L2Q6UXD5 910 aa12.87□□□□□ -0.35
HIF3A-218ENST00000600383 ADAD2Q8NCV1 583 aaKnown RBP12.87□□□□□ -0.35
HIF3A-218ENST00000600383 POM121Q96HA1 1249 aa12.87□□□□□ -0.35
HIF3A-218ENST00000600383 TMPRSS13Q9BYE2 586 aa12.87□□□□□ -0.35
HIF3A-218ENST00000600383 hCG_1807616A0A1W2PRN6 198 aa12.86□□□□□ -0.35
HIF3A-218ENST00000600383 PLSCR5A0PG75 271 aa12.86□□□□□ -0.35
HIF3A-218ENST00000600383 ZNF250P15622 560 aa12.86□□□□□ -0.35
HIF3A-218ENST00000600383 PI3P19957 117 aa12.86□□□□□ -0.35
HIF3A-218ENST00000600383 TMEM171Q8WVE6 324 aa12.86□□□□□ -0.35
HIF3A-218ENST00000600383 WDR13Q9H1Z4 485 aa12.86□□□□□ -0.35
HIF3A-218ENST00000600383 CA10Q9NS85 328 aa12.86□□□□□ -0.35
HIF3A-218ENST00000600383 ITPR1Q14643 2758 aa12.86□□□□□ -0.35
HIF3A-218ENST00000600383 ROS1P08922 2347 aa12.86□□□□□ -0.35
HIF3A-218ENST00000600383 PLCE1Q9P212 2302 aa12.86□□□□□ -0.35
HIF3A-218ENST00000600383 ABCD4O14678 606 aa12.86□□□□□ -0.35
HIF3A-218ENST00000600383 HLA-AP01891 365 aaKnown RBP12.86□□□□□ -0.35
HIF3A-218ENST00000600383 PGA5P0DJD9 388 aa12.86□□□□□ -0.35
HIF3A-218ENST00000600383 OR5H8P0DN80 308 aa12.86□□□□□ -0.35
HIF3A-218ENST00000600383 VAMP1P23763 118 aa12.86□□□□□ -0.35
HIF3A-218ENST00000600383 C11orf53Q8IXP5 236 aa12.86□□□□□ -0.35
HIF3A-218ENST00000600383 ZDHHC22Q8N966 263 aa12.86□□□□□ -0.35
HIF3A-218ENST00000600383 SPERTQ8NA61 448 aa12.86□□□□□ -0.35
HIF3A-218ENST00000600383 ZNF431Q8TF32 576 aaPredicted RBP12.86□□□□□ -0.35
HIF3A-218ENST00000600383 WFIKKN1Q96NZ8 548 aa12.86□□□□□ -0.35
HIF3A-218ENST00000600383 USB1Q9BQ65 265 aaKnown RBP12.86□□□□□ -0.35
HIF3A-218ENST00000600383 NRIP2Q9BQI9 281 aa12.86□□□□□ -0.35
HIF3A-218ENST00000600383 ZNF2Q9BSG1 426 aaPredicted RBP12.86□□□□□ -0.35
HIF3A-218ENST00000600383 ZNF436Q9C0F3 470 aaPredicted RBP12.86□□□□□ -0.35
HIF3A-218ENST00000600383 ZNF286AQ9HBT8 521 aa12.86□□□□□ -0.35
HIF3A-218ENST00000600383 OR14J1Q9UGF5 321 aa12.86□□□□□ -0.35
HIF3A-218ENST00000600383 SHANK1Q9Y566 2161 aa12.86□□□□□ -0.35
HIF3A-218ENST00000600383 MEIKINA0A087WXM9 373 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 TRAV24A0A0B4J272 114 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 OR5H14A6NHG9 310 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 SIRPB1O00241 398 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 WNT9BO14905 357 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 IGHV3-13P01766 116 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 THBDP07204 575 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 ERVK11-1P61568 191 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 DHRS2Q13268 280 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 GRK1Q15835 563 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 AADACL3Q5VUY0 350 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 Q6ZPA2 131 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 C5orf24Q7Z6I8 188 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 SLC25A42Q86VD7 318 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 Q8IYB0 196 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 DPCDQ9BVM2 203 aaPredicted RBP12.85□□□□□ -0.35
HIF3A-218ENST00000600383 SPACA1Q9HBV2 294 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 NECAP2Q9NVZ3 263 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 RCC2Q9P258 522 aaKnown RBP12.85□□□□□ -0.35
HIF3A-218ENST00000600383 FAM172BPA6NC97 362 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 DPRXA6NFQ7 191 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 FAM90A27PA6NNH2 459 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 SPRY3O43610 288 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 SIX6O95475 246 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 GSTT2P0CG29 244 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 SFTPCP11686 197 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 PTAFRP25105 342 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 SELENOVP59797 346 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 IL13RA1P78552 427 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 BSPH1Q075Z2 132 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 PPP1R1AQ13522 171 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 C2orf68Q2NKX9 166 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 C11orf88Q6PI97 169 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 LINC00596Q86U02 117 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms