RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 FAM234AQ9H0X4 552 aa11.34□□□□□ -0.59
VRK3-219ENST00000600137 METTL9Q9H1A3 318 aa11.34□□□□□ -0.59
VRK3-219ENST00000600137 RNF167Q9H6Y7 350 aa11.34□□□□□ -0.59
VRK3-219ENST00000600137 OR5V1Q9UGF6 321 aa11.34□□□□□ -0.59
VRK3-219ENST00000600137 STUB1Q9UNE7 303 aa11.34□□□□□ -0.59
VRK3-219ENST00000600137 MRPS28Q9Y2Q9 187 aaKnown RBP11.34□□□□□ -0.59
VRK3-219ENST00000600137 TRAV24A0A0B4J272 114 aa11.33□□□□□ -0.6
VRK3-219ENST00000600137 J3QLI3 93 aa11.33□□□□□ -0.6
VRK3-219ENST00000600137 OR2H2O95918 312 aa11.33□□□□□ -0.6
VRK3-219ENST00000600137 TFAP2AP05549 437 aa11.33□□□□□ -0.6
VRK3-219ENST00000600137 MMP9P14780 707 aa11.33□□□□□ -0.6
VRK3-219ENST00000600137 HOXB4P17483 251 aaPredicted RBP11.33□□□□□ -0.6
VRK3-219ENST00000600137 OR3A1P47881 315 aa11.33□□□□□ -0.6
VRK3-219ENST00000600137 IL13RA2Q14627 380 aa11.33□□□□□ -0.6
VRK3-219ENST00000600137 RSU1Q15404 277 aa11.33□□□□□ -0.6
VRK3-219ENST00000600137 PIGYQ3MUY2 71 aa11.33□□□□□ -0.6
VRK3-219ENST00000600137 SLC22A6Q4U2R8 563 aa11.33□□□□□ -0.6
VRK3-219ENST00000600137 GLT8D1Q68CQ7 371 aa11.33□□□□□ -0.6
VRK3-219ENST00000600137 OSR2Q8N2R0 312 aa11.33□□□□□ -0.6
VRK3-219ENST00000600137 C11orf42Q8N5U0 333 aa11.33□□□□□ -0.6
VRK3-219ENST00000600137 PNLDC1Q8NA58 520 aaKnown RBP11.33□□□□□ -0.6
VRK3-219ENST00000600137 TMEM185AQ8NFB2 350 aa11.33□□□□□ -0.6
VRK3-219ENST00000600137 DMRTB1Q96MA1 342 aa11.33□□□□□ -0.6
VRK3-219ENST00000600137 FAM192AQ9GZU8 254 aa11.33□□□□□ -0.6
VRK3-219ENST00000600137 C7orf69Q9H7B7 122 aa11.33□□□□□ -0.6
VRK3-219ENST00000600137 JMJD1CQ15652 2540 aa11.33□□□□□ -0.6
VRK3-219ENST00000600137 SIRPB1O00241 398 aa11.32□□□□□ -0.6
VRK3-219ENST00000600137 SLC33A1O00400 549 aaPredicted RBP11.32□□□□□ -0.6
VRK3-219ENST00000600137 SLC17A2O00624 439 aa11.32□□□□□ -0.6
VRK3-219ENST00000600137 SH2D1BO14796 132 aa11.32□□□□□ -0.6
VRK3-219ENST00000600137 ENSAO43768 121 aaKnown RBP11.32□□□□□ -0.6
VRK3-219ENST00000600137 ZNF780AO75290 641 aaPredicted RBP11.32□□□□□ -0.6
VRK3-219ENST00000600137 VSIG8P0DPA2 414 aa11.32□□□□□ -0.6
VRK3-219ENST00000600137 NDUFB7P17568 137 aa11.32□□□□□ -0.6
VRK3-219ENST00000600137 CFPP27918 469 aa11.32□□□□□ -0.6
VRK3-219ENST00000600137 ALDH3B2P48448 385 aa11.32□□□□□ -0.6
VRK3-219ENST00000600137 BMXP51813 675 aa11.32□□□□□ -0.6
VRK3-219ENST00000600137 RBM11P57052 281 aaKnown RBP11.32□□□□□ -0.6
VRK3-219ENST00000600137 OR10A3P58181 314 aa11.32□□□□□ -0.6
VRK3-219ENST00000600137 KLF17Q5JT82 389 aaPredicted RBP11.32□□□□□ -0.6
VRK3-219ENST00000600137 OR10K2Q6IF99 312 aa11.32□□□□□ -0.6
VRK3-219ENST00000600137 METAP1DQ6UB28 335 aaPredicted RBP11.32□□□□□ -0.6
VRK3-219ENST00000600137 OR8H2Q8N162 312 aa11.32□□□□□ -0.6
VRK3-219ENST00000600137 Q8N7P7 452 aa11.32□□□□□ -0.6
VRK3-219ENST00000600137 OR13F1Q8NGS4 319 aa11.32□□□□□ -0.6
VRK3-219ENST00000600137 CENPOQ9BU64 300 aa11.32□□□□□ -0.6
VRK3-219ENST00000600137 SIRPDQ9H106 197 aa11.32□□□□□ -0.6
VRK3-219ENST00000600137 SLITRK2Q9H156 845 aa11.32□□□□□ -0.6
VRK3-219ENST00000600137 KCNK15Q9H427 330 aa11.32□□□□□ -0.6
VRK3-219ENST00000600137 IFT22Q9H7X7 185 aa11.32□□□□□ -0.6
VRK3-219ENST00000600137 EXOSC4Q9NPD3 245 aaKnown RBP11.32□□□□□ -0.6
VRK3-219ENST00000600137 C19orf12Q9NSK7 152 aa11.32□□□□□ -0.6
VRK3-219ENST00000600137 ST3GAL6Q9Y274 331 aa11.32□□□□□ -0.6
VRK3-219ENST00000600137 V9GY05 133 aa11.32□□□□□ -0.6
VRK3-219ENST00000600137 KIAA2026Q5HYC2 2103 aa11.32□□□□□ -0.6
VRK3-219ENST00000600137 TMEM14DPA8MWL7 114 aa11.31□□□□□ -0.6
VRK3-219ENST00000600137 GEMIN2O14893 280 aaKnown RBP11.31□□□□□ -0.6
VRK3-219ENST00000600137 LDLRAD4O15165 306 aa11.31□□□□□ -0.6
VRK3-219ENST00000600137 LIPFP07098 398 aa11.31□□□□□ -0.6
VRK3-219ENST00000600137 PPIAL4GP0DN37 164 aa11.31□□□□□ -0.6
VRK3-219ENST00000600137 SERPINA2P20848 420 aa11.31□□□□□ -0.6
VRK3-219ENST00000600137 HTR2CP28335 458 aa11.31□□□□□ -0.6
VRK3-219ENST00000600137 ARF6P62330 175 aa11.31□□□□□ -0.6
VRK3-219ENST00000600137 UNC119Q13432 240 aa11.31□□□□□ -0.6
VRK3-219ENST00000600137 TUSC1Q2TAM9 212 aa11.31□□□□□ -0.6
VRK3-219ENST00000600137 TMEM200BQ69YZ2 307 aa11.31□□□□□ -0.6
VRK3-219ENST00000600137 AWAT2Q6E213 333 aa11.31□□□□□ -0.6
VRK3-219ENST00000600137 SIGIRRQ6IA17 410 aa11.31□□□□□ -0.6
VRK3-219ENST00000600137 TCF23Q7RTU1 214 aa11.31□□□□□ -0.6
VRK3-219ENST00000600137 ASCC1Q8N9N2 400 aaKnown RBP11.31□□□□□ -0.6
VRK3-219ENST00000600137 OR6M1Q8NGM8 313 aa11.31□□□□□ -0.6
VRK3-219ENST00000600137 UPRTQ96BW1 309 aa11.31□□□□□ -0.6
VRK3-219ENST00000600137 MRPS24Q96EL2 167 aaKnown RBP11.31□□□□□ -0.6
VRK3-219ENST00000600137 Q96M66 194 aa11.31□□□□□ -0.6
VRK3-219ENST00000600137 TBX15Q96SF7 602 aa11.31□□□□□ -0.6
VRK3-219ENST00000600137 CHCHD6Q9BRQ6 235 aa11.31□□□□□ -0.6
VRK3-219ENST00000600137 CHST6Q9GZX3 395 aa11.31□□□□□ -0.6
VRK3-219ENST00000600137 BANF2Q9H503 90 aa11.31□□□□□ -0.6
VRK3-219ENST00000600137 GHRLQ9UBU3 117 aa11.31□□□□□ -0.6
VRK3-219ENST00000600137 SSR3Q9UNL2 185 aa11.31□□□□□ -0.6
VRK3-219ENST00000600137 AUP1Q9Y679 476 aa11.31□□□□□ -0.6
VRK3-219ENST00000600137 TRBV23-1A0A0A0MS06 115 aa11.3□□□□□ -0.6
VRK3-219ENST00000600137 DEGS1O15121 323 aa11.3□□□□□ -0.6
VRK3-219ENST00000600137 CLEC2LP0C7M8 214 aa11.3□□□□□ -0.6
VRK3-219ENST00000600137 GTF2F2P13984 249 aa11.3□□□□□ -0.6
VRK3-219ENST00000600137 MGMTP16455 207 aa11.3□□□□□ -0.6
VRK3-219ENST00000600137 TGFBR1P36897 503 aa11.3□□□□□ -0.6
VRK3-219ENST00000600137 CAPZA1P52907 286 aa11.3□□□□□ -0.6
VRK3-219ENST00000600137 DLX6P56179 175 aa11.3□□□□□ -0.6
VRK3-219ENST00000600137 SCN1BQ07699 218 aa11.3□□□□□ -0.6
VRK3-219ENST00000600137 PLA2G7Q13093 441 aa11.3□□□□□ -0.6
VRK3-219ENST00000600137 GPR176Q14439 515 aa11.3□□□□□ -0.6
VRK3-219ENST00000600137 TAF9Q16594 264 aa11.3□□□□□ -0.6
VRK3-219ENST00000600137 FIP1L1Q6UN15 594 aaKnown RBP11.3□□□□□ -0.6
VRK3-219ENST00000600137 GDPGP1Q6ZNW5 385 aa11.3□□□□□ -0.6
VRK3-219ENST00000600137 CHST4Q8NCG5 386 aa11.3□□□□□ -0.6
VRK3-219ENST00000600137 OR4M1Q8NGD0 313 aa11.3□□□□□ -0.6
VRK3-219ENST00000600137 OR5D13Q8NGL4 314 aa11.3□□□□□ -0.6
VRK3-219ENST00000600137 H1FXQ92522 213 aaKnown RBP11.3□□□□□ -0.6
VRK3-219ENST00000600137 TNFRSF14Q92956 283 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms