RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 KRTAP10-11P60412 298 aa13.71□□□□□ -0.21
SMG9-210ENST00000600097 ZNF146Q15072 292 aa13.71□□□□□ -0.21
SMG9-210ENST00000600097 ODF4Q2M2E3 257 aa13.71□□□□□ -0.21
SMG9-210ENST00000600097 KHDC1LQ5JSQ8 128 aa13.71□□□□□ -0.21
SMG9-210ENST00000600097 SPIN3Q5JUX0 258 aa13.71□□□□□ -0.21
SMG9-210ENST00000600097 AADACL4Q5VUY2 407 aa13.71□□□□□ -0.21
SMG9-210ENST00000600097 BCDIN3DQ7Z5W3 292 aaKnown RBP13.71□□□□□ -0.21
SMG9-210ENST00000600097 CATSPERDQ86XM0 798 aa13.71□□□□□ -0.21
SMG9-210ENST00000600097 PQLC1Q8N2U9 271 aa13.71□□□□□ -0.21
SMG9-210ENST00000600097 YIPF7Q8N8F6 280 aa13.71□□□□□ -0.21
SMG9-210ENST00000600097 TMEM163Q8TC26 289 aa13.71□□□□□ -0.21
SMG9-210ENST00000600097 CREB3L1Q96BA8 519 aa13.71□□□□□ -0.21
SMG9-210ENST00000600097 C10orf35Q96D05 121 aa13.71□□□□□ -0.21
SMG9-210ENST00000600097 RBM14Q96PK6 669 aaKnown RBP13.71□□□□□ -0.21
SMG9-210ENST00000600097 CIB1Q99828 191 aa13.71□□□□□ -0.21
SMG9-210ENST00000600097 DNAH3Q8TD57 4116 aa13.71□□□□□ -0.22
SMG9-210ENST00000600097 COL7A1Q02388 2944 aa13.7□□□□□ -0.22
SMG9-210ENST00000600097 TRGV10A0A0A0MS01 117 aa13.7□□□□□ -0.22
SMG9-210ENST00000600097 TRBV2A0A0J9YWF9 115 aa13.7□□□□□ -0.22
SMG9-210ENST00000600097 FUOMA2VDF0 154 aa13.7□□□□□ -0.22
SMG9-210ENST00000600097 MITFO75030 526 aaPredicted RBP13.7□□□□□ -0.22
SMG9-210ENST00000600097 MMP23AO75900 390 aa13.7□□□□□ -0.22
SMG9-210ENST00000600097 BAG2O95816 211 aa13.7□□□□□ -0.22
SMG9-210ENST00000600097 CD24P25063 80 aa13.7□□□□□ -0.22
SMG9-210ENST00000600097 CEACAM3P40198 252 aa13.7□□□□□ -0.22
SMG9-210ENST00000600097 RBP2P50120 134 aa13.7□□□□□ -0.22
SMG9-210ENST00000600097 CDC42P60953 191 aa13.7□□□□□ -0.22
SMG9-210ENST00000600097 EFNB1P98172 346 aa13.7□□□□□ -0.22
SMG9-210ENST00000600097 CD69Q07108 199 aa13.7□□□□□ -0.22
SMG9-210ENST00000600097 DCTN2Q13561 401 aaKnown RBP13.7□□□□□ -0.22
SMG9-210ENST00000600097 HEPN1Q6WQI6 88 aa13.7□□□□□ -0.22
SMG9-210ENST00000600097 GID4Q8IVV7 300 aa13.7□□□□□ -0.22
SMG9-210ENST00000600097 FAM58AQ8N1B3 248 aa13.7□□□□□ -0.22
SMG9-210ENST00000600097 TCEANCQ8N8B7 351 aa13.7□□□□□ -0.22
SMG9-210ENST00000600097 DNAAF1Q8NEP3 725 aa13.7□□□□□ -0.22
SMG9-210ENST00000600097 PP6455Q8WZ26 134 aa13.7□□□□□ -0.22
SMG9-210ENST00000600097 RBFOX1Q9NWB1 397 aaKnown RBP13.7□□□□□ -0.22
SMG9-210ENST00000600097 KMT2CQ8NEZ4 4911 aaKnown RBP13.69□□□□□ -0.22
SMG9-210ENST00000600097 TENM3Q9P273 2699 aa13.69□□□□□ -0.22
SMG9-210ENST00000600097 ZAR1LA6NP61 321 aa13.69□□□□□ -0.22
SMG9-210ENST00000600097 IGLV1-47P01700 117 aa13.69□□□□□ -0.22
SMG9-210ENST00000600097 CDK2P24941 298 aa13.69□□□□□ -0.22
SMG9-210ENST00000600097 DUSP1P28562 367 aa13.69□□□□□ -0.22
SMG9-210ENST00000600097 OR3A1P47881 315 aa13.69□□□□□ -0.22
SMG9-210ENST00000600097 ALDH3A2P51648 485 aa13.69□□□□□ -0.22
SMG9-210ENST00000600097 ATP1B3P54709 279 aa13.69□□□□□ -0.22
SMG9-210ENST00000600097 OSR2Q8N2R0 312 aa13.69□□□□□ -0.22
SMG9-210ENST00000600097 LINC00482Q8N8I6 264 aa13.69□□□□□ -0.22
SMG9-210ENST00000600097 OR51D1Q8NGF3 324 aa13.69□□□□□ -0.22
SMG9-210ENST00000600097 WWC2-AS2Q96NR7 200 aa13.69□□□□□ -0.22
SMG9-210ENST00000600097 GABARAPL3Q9BY60 117 aa13.69□□□□□ -0.22
SMG9-210ENST00000600097 TAS2R3Q9NYW6 316 aa13.69□□□□□ -0.22
SMG9-210ENST00000600097 IL36RNQ9UBH0 155 aa13.69□□□□□ -0.22
SMG9-210ENST00000600097 PCDHGB5Q9Y5G0 923 aa13.69□□□□□ -0.22
SMG9-210ENST00000600097 METTL15A6NJ78 407 aa13.68□□□□□ -0.22
SMG9-210ENST00000600097 H3BSH0 61 aa13.68□□□□□ -0.22
SMG9-210ENST00000600097 EI24O14681 340 aa13.68□□□□□ -0.22
SMG9-210ENST00000600097 SH2D1BO14796 132 aa13.68□□□□□ -0.22
SMG9-210ENST00000600097 ENTPD6O75354 484 aa13.68□□□□□ -0.22
SMG9-210ENST00000600097 SULT1C4O75897 302 aa13.68□□□□□ -0.22
SMG9-210ENST00000600097 AMY1AP04745 511 aa13.68□□□□□ -0.22
SMG9-210ENST00000600097 AMY2AP04746 511 aa13.68□□□□□ -0.22
SMG9-210ENST00000600097 ALPLP05186 524 aa13.68□□□□□ -0.22
SMG9-210ENST00000600097 PRKACAP17612 351 aa13.68□□□□□ -0.22
SMG9-210ENST00000600097 CD34P28906 385 aa13.68□□□□□ -0.22
SMG9-210ENST00000600097 MNDAP41218 407 aa13.68□□□□□ -0.22
SMG9-210ENST00000600097 NPBWR2P48146 333 aa13.68□□□□□ -0.22
SMG9-210ENST00000600097 PRAMEF5Q5TYX0 476 aa13.68□□□□□ -0.22
SMG9-210ENST00000600097 CCDC144NLQ6NUI1 221 aa13.68□□□□□ -0.22
SMG9-210ENST00000600097 SSX6Q7RTT6 188 aa13.68□□□□□ -0.22
SMG9-210ENST00000600097 CORO2AQ92828 525 aa13.68□□□□□ -0.22
SMG9-210ENST00000600097 EME1Q96AY2 570 aa13.68□□□□□ -0.22
SMG9-210ENST00000600097 B9D2Q9BPU9 175 aa13.68□□□□□ -0.22
SMG9-210ENST00000600097 MCRIP2Q9BUT9 160 aaKnown RBP13.68□□□□□ -0.22
SMG9-210ENST00000600097 RIBC2Q9H4K1 309 aa13.68□□□□□ -0.22
SMG9-210ENST00000600097 WARS2Q9UGM6 360 aaKnown RBP13.68□□□□□ -0.22
SMG9-210ENST00000600097 HHLA2Q9UM44 414 aa13.68□□□□□ -0.22
SMG9-210ENST00000600097 ERICH4A6NGS2 130 aa13.67□□□□□ -0.22
SMG9-210ENST00000600097 OOSP1A8MZH6 123 aa13.67□□□□□ -0.22
SMG9-210ENST00000600097 M0R129 80 aa13.67□□□□□ -0.22
SMG9-210ENST00000600097 TOR1AO14656 332 aa13.67□□□□□ -0.22
SMG9-210ENST00000600097 OR2T7P0C7T2 308 aa13.67□□□□□ -0.22
SMG9-210ENST00000600097 UBCP0CG48 685 aaKnown RBP13.67□□□□□ -0.22
SMG9-210ENST00000600097 VSIG8P0DPA2 414 aa13.67□□□□□ -0.22
SMG9-210ENST00000600097 BCL3P20749 454 aa13.67□□□□□ -0.22
SMG9-210ENST00000600097 HOXD3P31249 432 aaPredicted RBP13.67□□□□□ -0.22
SMG9-210ENST00000600097 POU3F4P49335 361 aa13.67□□□□□ -0.22
SMG9-210ENST00000600097 MTCP1P56278 107 aa13.67□□□□□ -0.22
SMG9-210ENST00000600097 HLA-DRB5Q30154 266 aa13.67□□□□□ -0.22
SMG9-210ENST00000600097 C12orf73Q69YU5 71 aa13.67□□□□□ -0.22
SMG9-210ENST00000600097 C10orf99Q6UWK7 81 aa13.67□□□□□ -0.22
SMG9-210ENST00000600097 MRPL41Q8IXM3 137 aaKnown RBP13.67□□□□□ -0.22
SMG9-210ENST00000600097 CBR4Q8N4T8 237 aa13.67□□□□□ -0.22
SMG9-210ENST00000600097 IL4I1Q96RQ9 567 aa13.67□□□□□ -0.22
SMG9-210ENST00000600097 TBX5Q99593 518 aa13.67□□□□□ -0.22
SMG9-210ENST00000600097 HMG20AQ9NP66 347 aa13.67□□□□□ -0.22
SMG9-210ENST00000600097 EXOSC4Q9NPD3 245 aaKnown RBP13.67□□□□□ -0.22
SMG9-210ENST00000600097 LOC107986453A0A1B0GWG9 222 aa13.66□□□□□ -0.22
SMG9-210ENST00000600097 A0A1W2PQL4 384 aaPredicted RBP13.66□□□□□ -0.22
SMG9-210ENST00000600097 PSMB11A5LHX3 300 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms