RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 UBE2E1P51965 193 aa14.44□□□□□ -0.1
USHBP1-209ENST00000598570 TBCEQ15813 527 aaPredicted RBP14.44□□□□□ -0.1
USHBP1-209ENST00000598570 TCF23Q7RTU1 214 aa14.44□□□□□ -0.1
USHBP1-209ENST00000598570 PHC2Q8IXK0 858 aa14.44□□□□□ -0.1
USHBP1-209ENST00000598570 BATF2Q8N1L9 274 aa14.44□□□□□ -0.1
USHBP1-209ENST00000598570 OR5D18Q8NGL1 313 aa14.44□□□□□ -0.1
USHBP1-209ENST00000598570 H1FXQ92522 213 aaKnown RBP14.44□□□□□ -0.1
USHBP1-209ENST00000598570 PHYHIPQ92561 330 aa14.44□□□□□ -0.1
USHBP1-209ENST00000598570 CORO2AQ92828 525 aa14.44□□□□□ -0.1
USHBP1-209ENST00000598570 ORAI1Q96D31 301 aa14.44□□□□□ -0.1
USHBP1-209ENST00000598570 AJUBAQ96IF1 538 aa14.44□□□□□ -0.1
USHBP1-209ENST00000598570 MS4A7Q9GZW8 240 aaPredicted RBP14.44□□□□□ -0.1
USHBP1-209ENST00000598570 ZMAT3Q9HA38 289 aaKnown RBP14.44□□□□□ -0.1
USHBP1-209ENST00000598570 SF3B6Q9Y3B4 125 aaKnown RBP14.44□□□□□ -0.1
USHBP1-209ENST00000598570 MAGEA13PA6NCF6 341 aa14.43□□□□□ -0.1
USHBP1-209ENST00000598570 MGST3O14880 152 aa14.43□□□□□ -0.1
USHBP1-209ENST00000598570 OR2H2O95918 312 aa14.43□□□□□ -0.1
USHBP1-209ENST00000598570 OCMP0CE72 109 aaPredicted RBP14.43□□□□□ -0.1
USHBP1-209ENST00000598570 CPEP16870 476 aa14.43□□□□□ -0.1
USHBP1-209ENST00000598570 MAPK3P27361 379 aaPredicted RBP14.43□□□□□ -0.1
USHBP1-209ENST00000598570 ZNF93P35789 620 aaPredicted RBP14.43□□□□□ -0.1
USHBP1-209ENST00000598570 GABARAPL2P60520 117 aa14.43□□□□□ -0.1
USHBP1-209ENST00000598570 PPP3R1P63098 170 aa14.43□□□□□ -0.1
USHBP1-209ENST00000598570 GUCA2AQ02747 115 aa14.43□□□□□ -0.1
USHBP1-209ENST00000598570 MLLT11Q13015 90 aaPredicted RBP14.43□□□□□ -0.1
USHBP1-209ENST00000598570 IL13RA2Q14627 380 aa14.43□□□□□ -0.1
USHBP1-209ENST00000598570 ACSM3Q53FZ2 586 aa14.43□□□□□ -0.1
USHBP1-209ENST00000598570 NCR3LG1Q68D85 454 aa14.43□□□□□ -0.1
USHBP1-209ENST00000598570 Q6YL49 198 aa14.43□□□□□ -0.1
USHBP1-209ENST00000598570 OR4S1Q8NGB4 309 aa14.43□□□□□ -0.1
USHBP1-209ENST00000598570 C22orf15Q8WYQ4 148 aa14.43□□□□□ -0.1
USHBP1-209ENST00000598570 CNBD2Q96M20 576 aa14.43□□□□□ -0.1
USHBP1-209ENST00000598570 ONECUT1Q9UBC0 465 aa14.43□□□□□ -0.1
USHBP1-209ENST00000598570 CKLFQ9UBR5 152 aa14.43□□□□□ -0.1
USHBP1-209ENST00000598570 GLS2Q9UI32 602 aa14.43□□□□□ -0.1
USHBP1-209ENST00000598570 A0A1W2PPH5 198 aa14.42□□□□□ -0.1
USHBP1-209ENST00000598570 MEGF11A6BM72 1044 aa14.42□□□□□ -0.1
USHBP1-209ENST00000598570 RNF212BA8MTL3 300 aa14.42□□□□□ -0.1
USHBP1-209ENST00000598570 SLC33A1O00400 549 aaPredicted RBP14.42□□□□□ -0.1
USHBP1-209ENST00000598570 UCHL1P09936 223 aa14.42□□□□□ -0.1
USHBP1-209ENST00000598570 DUSP1P28562 367 aa14.42□□□□□ -0.1
USHBP1-209ENST00000598570 UBA52P62987 128 aaKnown RBP14.42□□□□□ -0.1
USHBP1-209ENST00000598570 SRSF2Q01130 221 aaKnown RBP14.42□□□□□ -0.1
USHBP1-209ENST00000598570 DDI2Q5TDH0 399 aa14.42□□□□□ -0.1
USHBP1-209ENST00000598570 BRD3OSQ6XYD6 125 aa14.42□□□□□ -0.1
USHBP1-209ENST00000598570 TMEM91Q6ZNR0 172 aa14.42□□□□□ -0.1
USHBP1-209ENST00000598570 LRRTM1Q86UE6 522 aa14.42□□□□□ -0.1
USHBP1-209ENST00000598570 TMEM86BQ8N661 226 aa14.42□□□□□ -0.1
USHBP1-209ENST00000598570 TNFAIP8L1Q8WVP5 186 aa14.42□□□□□ -0.1
USHBP1-209ENST00000598570 LHX4Q969G2 390 aa14.42□□□□□ -0.1
USHBP1-209ENST00000598570 C19orf24Q9BVV8 132 aa14.42□□□□□ -0.1
USHBP1-209ENST00000598570 PPIL3Q9H2H8 161 aaKnown RBP14.42□□□□□ -0.1
USHBP1-209ENST00000598570 BLOC1S6Q9UL45 172 aa14.42□□□□□ -0.1
USHBP1-209ENST00000598570 IGHV3OR16-10A0A075B7F0 116 aa14.41□□□□□ -0.1
USHBP1-209ENST00000598570 ZNF780AO75290 641 aaPredicted RBP14.41□□□□□ -0.1
USHBP1-209ENST00000598570 CGB3P0DN86 165 aa14.41□□□□□ -0.1
USHBP1-209ENST00000598570 CGB7P0DN87 165 aa14.41□□□□□ -0.1
USHBP1-209ENST00000598570 OR3A4PP47883 348 aa14.41□□□□□ -0.1
USHBP1-209ENST00000598570 COMPP49747 757 aaPredicted RBP14.41□□□□□ -0.1
USHBP1-209ENST00000598570 ZNF273Q14593 569 aa14.41□□□□□ -0.1
USHBP1-209ENST00000598570 MED22Q15528 200 aa14.41□□□□□ -0.1
USHBP1-209ENST00000598570 TRAM1Q15629 374 aa14.41□□□□□ -0.1
USHBP1-209ENST00000598570 DEFB112Q30KQ8 113 aa14.41□□□□□ -0.1
USHBP1-209ENST00000598570 LDLRAD3Q86YD5 345 aa14.41□□□□□ -0.1
USHBP1-209ENST00000598570 MRPS24Q96EL2 167 aaKnown RBP14.41□□□□□ -0.1
USHBP1-209ENST00000598570 MGLLQ99685 303 aa14.41□□□□□ -0.1
USHBP1-209ENST00000598570 UQCC2Q9BRT2 126 aa14.41□□□□□ -0.1
USHBP1-209ENST00000598570 LINC00574Q9H8X3 128 aa14.41□□□□□ -0.1
USHBP1-209ENST00000598570 EXOSC4Q9NPD3 245 aaKnown RBP14.41□□□□□ -0.1
USHBP1-209ENST00000598570 ACOT13Q9NPJ3 140 aa14.41□□□□□ -0.1
USHBP1-209ENST00000598570 GSTK1Q9Y2Q3 226 aa14.41□□□□□ -0.1
USHBP1-209ENST00000598570 LINC00312Q9Y6C7 94 aa14.41□□□□□ -0.1
USHBP1-209ENST00000598570 TRAV24A0A0B4J272 114 aa14.4□□□□□ -0.1
USHBP1-209ENST00000598570 A0A1W2PQ09 198 aa14.4□□□□□ -0.1
USHBP1-209ENST00000598570 TRIM77I1YAP6 450 aa14.4□□□□□ -0.1
USHBP1-209ENST00000598570 INMTO95050 263 aa14.4□□□□□ -0.1
USHBP1-209ENST00000598570 RNASE1P07998 156 aaKnown RBP14.4□□□□□ -0.1
USHBP1-209ENST00000598570 ZNF728P0DKX0 622 aa14.4□□□□□ -0.1
USHBP1-209ENST00000598570 PSMA1P25786 263 aaKnown RBP14.4□□□□□ -0.1
USHBP1-209ENST00000598570 CAPZA1P52907 286 aa14.4□□□□□ -0.1
USHBP1-209ENST00000598570 P2RX3P56373 397 aa14.4□□□□□ -0.1
USHBP1-209ENST00000598570 EMX1Q04741 257 aaPredicted RBP14.4□□□□□ -0.1
USHBP1-209ENST00000598570 BLMHQ13867 455 aa14.4□□□□□ -0.1
USHBP1-209ENST00000598570 INSL4Q14641 139 aa14.4□□□□□ -0.1
USHBP1-209ENST00000598570 SLC9A3R2Q15599 337 aa14.4□□□□□ -0.1
USHBP1-209ENST00000598570 MIDNQ504T8 468 aa14.4□□□□□ -0.1
USHBP1-209ENST00000598570 C1orf100Q5SVJ3 147 aa14.4□□□□□ -0.1
USHBP1-209ENST00000598570 RUSC1-AS1Q66K80 236 aa14.4□□□□□ -0.1
USHBP1-209ENST00000598570 GDPD3Q7L5L3 318 aa14.4□□□□□ -0.1
USHBP1-209ENST00000598570 SATL1Q86VE3 508 aa14.4□□□□□ -0.1
USHBP1-209ENST00000598570 NKAIN3Q8N8D7 197 aa14.4□□□□□ -0.1
USHBP1-209ENST00000598570 ASCC1Q8N9N2 400 aaKnown RBP14.4□□□□□ -0.1
USHBP1-209ENST00000598570 OR4M1Q8NGD0 313 aa14.4□□□□□ -0.1
USHBP1-209ENST00000598570 PPP1R35Q8TAP8 253 aa14.4□□□□□ -0.1
USHBP1-209ENST00000598570 METTL9Q9H1A3 318 aa14.4□□□□□ -0.1
USHBP1-209ENST00000598570 Q9H521 79 aa14.4□□□□□ -0.1
USHBP1-209ENST00000598570 UBE2J1Q9Y385 318 aaPredicted RBP14.4□□□□□ -0.1
USHBP1-209ENST00000598570 LRRC42Q9Y546 428 aa14.4□□□□□ -0.1
USHBP1-209ENST00000598570 PNMA8CA0A1B0GUJ8 204 aa14.39□□□□□ -0.11
USHBP1-209ENST00000598570 A0A1W2PPK0 400 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms