RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 ANGPTL7O43827 346 aa11.24□□□□□ -0.61
SCAF1-203ENST00000598359 NOS1APO75052 506 aaPredicted RBP11.24□□□□□ -0.61
SCAF1-203ENST00000598359 SULT1C4O75897 302 aa11.24□□□□□ -0.61
SCAF1-203ENST00000598359 GALP22466 123 aa11.24□□□□□ -0.61
SCAF1-203ENST00000598359 MPZP25189 248 aa11.24□□□□□ -0.61
SCAF1-203ENST00000598359 OR12D2P58182 307 aa11.24□□□□□ -0.61
SCAF1-203ENST00000598359 ACTC1P68032 377 aa11.24□□□□□ -0.61
SCAF1-203ENST00000598359 ACTA1P68133 377 aa11.24□□□□□ -0.61
SCAF1-203ENST00000598359 GUCA2AQ02747 115 aa11.24□□□□□ -0.61
SCAF1-203ENST00000598359 GPR50Q13585 617 aa11.24□□□□□ -0.61
SCAF1-203ENST00000598359 FAM220AQ7Z4H9 259 aa11.24□□□□□ -0.61
SCAF1-203ENST00000598359 MKXQ8IYA7 352 aa11.24□□□□□ -0.61
SCAF1-203ENST00000598359 MFSD4AQ8N468 514 aa11.24□□□□□ -0.61
SCAF1-203ENST00000598359 OR4F5Q8NH21 305 aa11.24□□□□□ -0.61
SCAF1-203ENST00000598359 UFD1Q92890 307 aa11.24□□□□□ -0.61
SCAF1-203ENST00000598359 SLAMF9Q96A28 289 aa11.24□□□□□ -0.61
SCAF1-203ENST00000598359 DMRTB1Q96MA1 342 aa11.24□□□□□ -0.61
SCAF1-203ENST00000598359 METTL8Q9H825 291 aaKnown RBP11.24□□□□□ -0.61
SCAF1-203ENST00000598359 BEX1Q9HBH7 125 aa11.24□□□□□ -0.61
SCAF1-203ENST00000598359 HES4Q9HCC6 221 aa11.24□□□□□ -0.61
SCAF1-203ENST00000598359 HMG20AQ9NP66 347 aa11.24□□□□□ -0.61
SCAF1-203ENST00000598359 ZNRD1Q9P1U0 126 aa11.24□□□□□ -0.61
SCAF1-203ENST00000598359 SSR3Q9UNL2 185 aa11.24□□□□□ -0.61
SCAF1-203ENST00000598359 SLC7A11Q9UPY5 501 aa11.24□□□□□ -0.61
SCAF1-203ENST00000598359 POLDIP2Q9Y2S7 368 aa11.24□□□□□ -0.61
SCAF1-203ENST00000598359 A0A075B6Q4 140 aa11.23□□□□□ -0.61
SCAF1-203ENST00000598359 TRBV23-1A0A0A0MS06 115 aa11.23□□□□□ -0.61
SCAF1-203ENST00000598359 A0A0G2JK05 382 aa11.23□□□□□ -0.61
SCAF1-203ENST00000598359 LOC100506127A0A0U1RQW1 187 aa11.23□□□□□ -0.61
SCAF1-203ENST00000598359 DAPL1A0PJW8 107 aa11.23□□□□□ -0.61
SCAF1-203ENST00000598359 KNG1P01042 644 aa11.23□□□□□ -0.61
SCAF1-203ENST00000598359 FBP1P09467 338 aa11.23□□□□□ -0.61
SCAF1-203ENST00000598359 CALCBP10092 127 aa11.23□□□□□ -0.61
SCAF1-203ENST00000598359 CCL3L1P16619 93 aa11.23□□□□□ -0.61
SCAF1-203ENST00000598359 FGF9P31371 208 aaPredicted RBP11.23□□□□□ -0.61
SCAF1-203ENST00000598359 GABRA5P31644 462 aa11.23□□□□□ -0.61
SCAF1-203ENST00000598359 UBE2E1P51965 193 aa11.23□□□□□ -0.61
SCAF1-203ENST00000598359 NANOS3P60323 173 aaKnown RBP11.23□□□□□ -0.61
SCAF1-203ENST00000598359 KRTAP10-3P60369 221 aa11.23□□□□□ -0.61
SCAF1-203ENST00000598359 ERVK11-1P61568 191 aa11.23□□□□□ -0.61
SCAF1-203ENST00000598359 RPL31P62899 125 aaKnown RBP11.23□□□□□ -0.61
SCAF1-203ENST00000598359 IL24Q13007 206 aa11.23□□□□□ -0.61
SCAF1-203ENST00000598359 GALEQ14376 348 aa11.23□□□□□ -0.61
SCAF1-203ENST00000598359 PRR31Q5SQ13 230 aa11.23□□□□□ -0.61
SCAF1-203ENST00000598359 LIPKQ5VXJ0 399 aa11.23□□□□□ -0.61
SCAF1-203ENST00000598359 TMEM200BQ69YZ2 307 aa11.23□□□□□ -0.61
SCAF1-203ENST00000598359 TMPRSS11AQ6ZMR5 421 aa11.23□□□□□ -0.61
SCAF1-203ENST00000598359 C1orf122Q6ZSJ8 110 aa11.23□□□□□ -0.61
SCAF1-203ENST00000598359 OR2G2Q8NGZ5 317 aa11.23□□□□□ -0.61
SCAF1-203ENST00000598359 OR10AC1Q8NH08 325 aa11.23□□□□□ -0.61
SCAF1-203ENST00000598359 MCFD2Q8NI22 146 aa11.23□□□□□ -0.61
SCAF1-203ENST00000598359 WFDC12Q8WWY7 111 aa11.23□□□□□ -0.61
SCAF1-203ENST00000598359 DYRK2Q92630 601 aa11.23□□□□□ -0.61
SCAF1-203ENST00000598359 ADAT3Q96EY9 351 aaPredicted RBP11.23□□□□□ -0.61
SCAF1-203ENST00000598359 MTCH1Q9NZJ7 389 aa11.23□□□□□ -0.61
SCAF1-203ENST00000598359 IL36RNQ9UBH0 155 aa11.23□□□□□ -0.61
SCAF1-203ENST00000598359 MMP24Q9Y5R2 645 aa11.23□□□□□ -0.61
SCAF1-203ENST00000598359 TRDV1A0A1B0GX56 115 aa11.22□□□□□ -0.61
SCAF1-203ENST00000598359 J3QLW9 94 aa11.22□□□□□ -0.61
SCAF1-203ENST00000598359 NDUFA7O95182 113 aa11.22□□□□□ -0.61
SCAF1-203ENST00000598359 PAHP00439 452 aa11.22□□□□□ -0.61
SCAF1-203ENST00000598359 LALBAP00709 142 aa11.22□□□□□ -0.61
SCAF1-203ENST00000598359 IL1AP01583 271 aa11.22□□□□□ -0.61
SCAF1-203ENST00000598359 TK1P04183 234 aa11.22□□□□□ -0.61
SCAF1-203ENST00000598359 ZNF19P17023 458 aa11.22□□□□□ -0.61
SCAF1-203ENST00000598359 COX7A1P24310 79 aa11.22□□□□□ -0.61
SCAF1-203ENST00000598359 COL10A1Q03692 680 aa11.22□□□□□ -0.61
SCAF1-203ENST00000598359 ZNF273Q14593 569 aa11.22□□□□□ -0.61
SCAF1-203ENST00000598359 OLFML2AQ68BL7 652 aa11.22□□□□□ -0.61
SCAF1-203ENST00000598359 NCR3LG1Q68D85 454 aa11.22□□□□□ -0.61
SCAF1-203ENST00000598359 SLC25A26Q70HW3 274 aa11.22□□□□□ -0.61
SCAF1-203ENST00000598359 RNF144BQ7Z419 303 aa11.22□□□□□ -0.61
SCAF1-203ENST00000598359 LHFPL3Q86UP9 236 aa11.22□□□□□ -0.61
SCAF1-203ENST00000598359 ZNF561Q8N587 486 aa11.22□□□□□ -0.61
SCAF1-203ENST00000598359 ASCC1Q8N9N2 400 aaKnown RBP11.22□□□□□ -0.61
SCAF1-203ENST00000598359 FGGYQ96C11 551 aa11.22□□□□□ -0.61
SCAF1-203ENST00000598359 AJUBAQ96IF1 538 aa11.22□□□□□ -0.61
SCAF1-203ENST00000598359 CEP19Q96LK0 163 aa11.22□□□□□ -0.61
SCAF1-203ENST00000598359 ALG8Q9BVK2 526 aa11.22□□□□□ -0.61
SCAF1-203ENST00000598359 PKIBQ9C010 78 aa11.22□□□□□ -0.61
SCAF1-203ENST00000598359 CHST5Q9GZS9 411 aa11.22□□□□□ -0.61
SCAF1-203ENST00000598359 SLITRK2Q9H156 845 aa11.22□□□□□ -0.61
SCAF1-203ENST00000598359 DPAGT1Q9H3H5 408 aa11.22□□□□□ -0.61
SCAF1-203ENST00000598359 RNF167Q9H6Y7 350 aa11.22□□□□□ -0.61
SCAF1-203ENST00000598359 TXNL4BQ9NX01 149 aaKnown RBP11.22□□□□□ -0.61
SCAF1-203ENST00000598359 FRRS1LQ9P0K9 344 aa11.22□□□□□ -0.61
SCAF1-203ENST00000598359 IGKV1-9A0A0C4DH69 117 aa11.21□□□□□ -0.61
SCAF1-203ENST00000598359 CLPSL1A2RUU4 121 aa11.21□□□□□ -0.61
SCAF1-203ENST00000598359 GATBO75879 557 aaKnown RBP11.21□□□□□ -0.61
SCAF1-203ENST00000598359 UBCP0CG48 685 aaKnown RBP11.21□□□□□ -0.61
SCAF1-203ENST00000598359 SOX6P35712 828 aa11.21□□□□□ -0.61
SCAF1-203ENST00000598359 ETV6P41212 452 aa11.21□□□□□ -0.61
SCAF1-203ENST00000598359 FUT6P51993 359 aa11.21□□□□□ -0.61
SCAF1-203ENST00000598359 SNU13P55769 128 aaKnown RBP11.21□□□□□ -0.61
SCAF1-203ENST00000598359 TAS2R43P59537 309 aa11.21□□□□□ -0.61
SCAF1-203ENST00000598359 RPS25P62851 125 aaKnown RBP11.21□□□□□ -0.61
SCAF1-203ENST00000598359 ZNF782Q6ZMW2 699 aaPredicted RBP11.21□□□□□ -0.61
SCAF1-203ENST00000598359 C17orf107Q6ZR85 190 aa11.21□□□□□ -0.61
SCAF1-203ENST00000598359 EGFL6Q8IUX8 553 aa11.21□□□□□ -0.61
SCAF1-203ENST00000598359 SYS1Q8N2H4 156 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms