RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 E9PQ18 207 aa13.62□□□□□ -0.23
PNKP-210ENST00000597965 SULT1C4O75897 302 aa13.62□□□□□ -0.23
PNKP-210ENST00000597965 RPP14O95059 124 aaKnown RBP13.62□□□□□ -0.23
PNKP-210ENST00000597965 ATP1B3P54709 279 aa13.62□□□□□ -0.23
PNKP-210ENST00000597965 BDH1Q02338 343 aa13.62□□□□□ -0.23
PNKP-210ENST00000597965 ZNF146Q15072 292 aa13.62□□□□□ -0.23
PNKP-210ENST00000597965 UBE2V2Q15819 145 aa13.62□□□□□ -0.23
PNKP-210ENST00000597965 FAHD1Q6P587 224 aa13.62□□□□□ -0.23
PNKP-210ENST00000597965 Q6ZS46 218 aa13.62□□□□□ -0.23
PNKP-210ENST00000597965 DNAAF1Q8NEP3 725 aa13.62□□□□□ -0.23
PNKP-210ENST00000597965 TMEM163Q8TC26 289 aa13.62□□□□□ -0.23
PNKP-210ENST00000597965 NR1H4Q96RI1 486 aaPredicted RBP13.62□□□□□ -0.23
PNKP-210ENST00000597965 KRT84Q9NSB2 600 aa13.62□□□□□ -0.23
PNKP-210ENST00000597965 ZMAT5Q9UDW3 170 aaKnown RBP13.62□□□□□ -0.23
PNKP-210ENST00000597965 MRM2Q9UI43 246 aaKnown RBP13.62□□□□□ -0.23
PNKP-210ENST00000597965 TRBV2A0A0J9YWF9 115 aa13.61□□□□□ -0.23
PNKP-210ENST00000597965 TMEM82A0PJX8 343 aa13.61□□□□□ -0.23
PNKP-210ENST00000597965 MEX3AA1L020 520 aaKnown RBP13.61□□□□□ -0.23
PNKP-210ENST00000597965 OR2F2O95006 317 aa13.61□□□□□ -0.23
PNKP-210ENST00000597965 OR2T7P0C7T2 308 aa13.61□□□□□ -0.23
PNKP-210ENST00000597965 UBCP0CG48 685 aaKnown RBP13.61□□□□□ -0.23
PNKP-210ENST00000597965 MNDAP41218 407 aa13.61□□□□□ -0.23
PNKP-210ENST00000597965 MED21Q13503 144 aa13.61□□□□□ -0.23
PNKP-210ENST00000597965 TMEM95Q3KNT9 176 aa13.61□□□□□ -0.23
PNKP-210ENST00000597965 DEFB121Q5J5C9 76 aa13.61□□□□□ -0.23
PNKP-210ENST00000597965 CCDC144NLQ6NUI1 221 aa13.61□□□□□ -0.23
PNKP-210ENST00000597965 PLEKHG7Q6ZR37 379 aa13.61□□□□□ -0.23
PNKP-210ENST00000597965 TCF23Q7RTU1 214 aa13.61□□□□□ -0.23
PNKP-210ENST00000597965 CATSPERDQ86XM0 798 aa13.61□□□□□ -0.23
PNKP-210ENST00000597965 FAM58AQ8N1B3 248 aa13.61□□□□□ -0.23
PNKP-210ENST00000597965 ABHD12Q8N2K0 398 aa13.61□□□□□ -0.23
PNKP-210ENST00000597965 TCEANCQ8N8B7 351 aa13.61□□□□□ -0.23
PNKP-210ENST00000597965 OR51D1Q8NGF3 324 aa13.61□□□□□ -0.23
PNKP-210ENST00000597965 OR4P4Q8NGL7 312 aa13.61□□□□□ -0.23
PNKP-210ENST00000597965 SLC25A33Q9BSK2 321 aa13.61□□□□□ -0.23
PNKP-210ENST00000597965 Q9H521 79 aa13.61□□□□□ -0.23
PNKP-210ENST00000597965 WARS2Q9UGM6 360 aaKnown RBP13.61□□□□□ -0.23
PNKP-210ENST00000597965 METTL15A6NJ78 407 aa13.6□□□□□ -0.23
PNKP-210ENST00000597965 F8VVB4 439 aa13.6□□□□□ -0.23
PNKP-210ENST00000597965 F8VWA3 439 aa13.6□□□□□ -0.23
PNKP-210ENST00000597965 G3V2T6 193 aa13.6□□□□□ -0.23
PNKP-210ENST00000597965 TOR1AO14656 332 aa13.6□□□□□ -0.23
PNKP-210ENST00000597965 EI24O14681 340 aa13.6□□□□□ -0.23
PNKP-210ENST00000597965 SH2D1BO14796 132 aa13.6□□□□□ -0.23
PNKP-210ENST00000597965 LPLP06858 475 aa13.6□□□□□ -0.23
PNKP-210ENST00000597965 OCM2P0CE71 109 aa13.6□□□□□ -0.23
PNKP-210ENST00000597965 OCMP0CE72 109 aaPredicted RBP13.6□□□□□ -0.23
PNKP-210ENST00000597965 PRKACBP22694 351 aa13.6□□□□□ -0.23
PNKP-210ENST00000597965 PRRX1P54821 245 aa13.6□□□□□ -0.23
PNKP-210ENST00000597965 P2RX3P56373 397 aa13.6□□□□□ -0.23
PNKP-210ENST00000597965 ZNF91Q05481 1191 aa13.6□□□□□ -0.23
PNKP-210ENST00000597965 ODF4Q2M2E3 257 aa13.6□□□□□ -0.23
PNKP-210ENST00000597965 ABCA11PQ4W5N1 156 aa13.6□□□□□ -0.23
PNKP-210ENST00000597965 KHDC1LQ5JSQ8 128 aa13.6□□□□□ -0.23
PNKP-210ENST00000597965 AADACL4Q5VUY2 407 aa13.6□□□□□ -0.23
PNKP-210ENST00000597965 HEPN1Q6WQI6 88 aa13.6□□□□□ -0.23
PNKP-210ENST00000597965 ZDHHC13Q8IUH4 622 aa13.6□□□□□ -0.23
PNKP-210ENST00000597965 MYDGFQ969H8 173 aa13.6□□□□□ -0.23
PNKP-210ENST00000597965 RBM14Q96PK6 669 aaKnown RBP13.6□□□□□ -0.23
PNKP-210ENST00000597965 MCRIP2Q9BUT9 160 aaKnown RBP13.6□□□□□ -0.23
PNKP-210ENST00000597965 CHST6Q9GZX3 395 aa13.6□□□□□ -0.23
PNKP-210ENST00000597965 RHOFQ9HBH0 211 aa13.6□□□□□ -0.23
PNKP-210ENST00000597965 TAS2R3Q9NYW6 316 aa13.6□□□□□ -0.23
PNKP-210ENST00000597965 IGKV1-27A0A075B6S5 117 aa13.59□□□□□ -0.23
PNKP-210ENST00000597965 OOSP1A8MZH6 123 aa13.59□□□□□ -0.23
PNKP-210ENST00000597965 MAGEB4O15481 346 aaPredicted RBP13.59□□□□□ -0.23
PNKP-210ENST00000597965 INMTO95050 263 aa13.59□□□□□ -0.23
PNKP-210ENST00000597965 IGHA1P01876 353 aa13.59□□□□□ -0.23
PNKP-210ENST00000597965 SLC6A1P30531 599 aa13.59□□□□□ -0.23
PNKP-210ENST00000597965 ATP6V1E1P36543 226 aa13.59□□□□□ -0.23
PNKP-210ENST00000597965 DAPP51397 102 aa13.59□□□□□ -0.23
PNKP-210ENST00000597965 MTCP1P56278 107 aa13.59□□□□□ -0.23
PNKP-210ENST00000597965 EFNB1P98172 346 aa13.59□□□□□ -0.23
PNKP-210ENST00000597965 FAM220AQ7Z4H9 259 aa13.59□□□□□ -0.23
PNKP-210ENST00000597965 TPRX1Q8N7U7 411 aa13.59□□□□□ -0.23
PNKP-210ENST00000597965 OR52N4Q8NGI2 321 aa13.59□□□□□ -0.23
PNKP-210ENST00000597965 OR4D6Q8NGJ1 314 aa13.59□□□□□ -0.23
PNKP-210ENST00000597965 TFAP2CQ92754 450 aa13.59□□□□□ -0.23
PNKP-210ENST00000597965 OSBPL10Q9BXB5 764 aa13.59□□□□□ -0.23
PNKP-210ENST00000597965 NEK6Q9HC98 313 aa13.59□□□□□ -0.23
PNKP-210ENST00000597965 PCDHB16Q9NRJ7 776 aa13.59□□□□□ -0.23
PNKP-210ENST00000597965 K7EIL1 84 aa13.58□□□□□ -0.24
PNKP-210ENST00000597965 PSPNO60542 156 aa13.58□□□□□ -0.24
PNKP-210ENST00000597965 ALPLP05186 524 aa13.58□□□□□ -0.24
PNKP-210ENST00000597965 FAM106CPP0CH98 169 aa13.58□□□□□ -0.24
PNKP-210ENST00000597965 PRKACAP17612 351 aa13.58□□□□□ -0.24
PNKP-210ENST00000597965 CD34P28906 385 aa13.58□□□□□ -0.24
PNKP-210ENST00000597965 ALDH3A2P51648 485 aa13.58□□□□□ -0.24
PNKP-210ENST00000597965 TMED1Q13445 227 aa13.58□□□□□ -0.24
PNKP-210ENST00000597965 LHFPL2Q6ZUX7 228 aa13.58□□□□□ -0.24
PNKP-210ENST00000597965 CORO2AQ92828 525 aa13.58□□□□□ -0.24
PNKP-210ENST00000597965 SPSB1Q96BD6 273 aa13.58□□□□□ -0.24
PNKP-210ENST00000597965 EXOSC4Q9NPD3 245 aaKnown RBP13.58□□□□□ -0.24
PNKP-210ENST00000597965 RBFOX1Q9NWB1 397 aaKnown RBP13.58□□□□□ -0.24
PNKP-210ENST00000597965 A0A1W2PQL4 384 aaPredicted RBP13.57□□□□□ -0.24
PNKP-210ENST00000597965 MAGEA13PA6NCF6 341 aa13.57□□□□□ -0.24
PNKP-210ENST00000597965 ZAR1LA6NP61 321 aa13.57□□□□□ -0.24
PNKP-210ENST00000597965 IGLV1-47P01700 117 aa13.57□□□□□ -0.24
PNKP-210ENST00000597965 JUNBP17275 347 aaPredicted RBP13.57□□□□□ -0.24
PNKP-210ENST00000597965 CDK2P24941 298 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms