RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 C1orf159Q96HA4 380 aa10.1□□□□□ -0.79
SHKBP1-213ENST00000597325 HES4Q9HCC6 221 aa10.1□□□□□ -0.79
SHKBP1-213ENST00000597325 HMG20AQ9NP66 347 aa10.1□□□□□ -0.79
SHKBP1-213ENST00000597325 MYOZ1Q9NP98 299 aaPredicted RBP10.1□□□□□ -0.79
SHKBP1-213ENST00000597325 DIABLOQ9NR28 239 aa10.1□□□□□ -0.79
SHKBP1-213ENST00000597325 ST3GAL6Q9Y274 331 aa10.1□□□□□ -0.79
SHKBP1-213ENST00000597325 CACNG2Q9Y698 323 aa10.1□□□□□ -0.79
SHKBP1-213ENST00000597325 TANC2Q9HCD6 1990 aa10.1□□□□□ -0.79
SHKBP1-213ENST00000597325 PLCE1Q9P212 2302 aa10.1□□□□□ -0.79
SHKBP1-213ENST00000597325 F8VVB4 439 aa10.09□□□□□ -0.79
SHKBP1-213ENST00000597325 F8VWA3 439 aa10.09□□□□□ -0.79
SHKBP1-213ENST00000597325 TMEM178BH3BS89 294 aa10.09□□□□□ -0.79
SHKBP1-213ENST00000597325 H3BUI4 141 aa10.09□□□□□ -0.79
SHKBP1-213ENST00000597325 EIF4EP06730 217 aaKnown RBP10.09□□□□□ -0.79
SHKBP1-213ENST00000597325 ELK1P19419 428 aa10.09□□□□□ -0.79
SHKBP1-213ENST00000597325 GABRR1P24046 479 aa10.09□□□□□ -0.79
SHKBP1-213ENST00000597325 PITPNBP48739 271 aa10.09□□□□□ -0.79
SHKBP1-213ENST00000597325 COMPP49747 757 aaPredicted RBP10.09□□□□□ -0.79
SHKBP1-213ENST00000597325 IKZF1Q13422 519 aa10.09□□□□□ -0.79
SHKBP1-213ENST00000597325 IL13RA2Q14627 380 aa10.09□□□□□ -0.79
SHKBP1-213ENST00000597325 KCNJ8Q15842 424 aa10.09□□□□□ -0.79
SHKBP1-213ENST00000597325 CARTPTQ16568 116 aa10.09□□□□□ -0.79
SHKBP1-213ENST00000597325 MICBQ29980 383 aa10.09□□□□□ -0.79
SHKBP1-213ENST00000597325 PIGYQ3MUY2 71 aa10.09□□□□□ -0.79
SHKBP1-213ENST00000597325 NHLRC3Q5JS37 347 aa10.09□□□□□ -0.79
SHKBP1-213ENST00000597325 RAB12Q6IQ22 244 aa10.09□□□□□ -0.79
SHKBP1-213ENST00000597325 ACP7Q6ZNF0 438 aa10.09□□□□□ -0.79
SHKBP1-213ENST00000597325 CMTM4Q8IZR5 234 aa10.09□□□□□ -0.79
SHKBP1-213ENST00000597325 GCSAMQ8N6F7 178 aa10.09□□□□□ -0.79
SHKBP1-213ENST00000597325 Q8NFD4 153 aa10.09□□□□□ -0.79
SHKBP1-213ENST00000597325 OR6Q1Q8NGQ2 317 aa10.09□□□□□ -0.79
SHKBP1-213ENST00000597325 YIPF5Q969M3 257 aa10.09□□□□□ -0.79
SHKBP1-213ENST00000597325 Q96M66 194 aa10.09□□□□□ -0.79
SHKBP1-213ENST00000597325 WDR13Q9H1Z4 485 aa10.09□□□□□ -0.79
SHKBP1-213ENST00000597325 ABCG5Q9H222 651 aa10.09□□□□□ -0.79
SHKBP1-213ENST00000597325 NLKQ9UBE8 527 aa10.09□□□□□ -0.79
SHKBP1-213ENST00000597325 EXTL2Q9UBQ6 330 aa10.09□□□□□ -0.79
SHKBP1-213ENST00000597325 PPIAL4EA0A075B759 164 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 IGHV3OR15-7A0A075B7D8 119 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 A0A0A6YYH2 397 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 TRAV38-1A0A0B4J264 116 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 FAM90A10PA6NDY2 464 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 FAM90A18PA6NE21 464 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 FAM90A16PA6NEW6 464 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 OOEPA6NGQ2 149 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 FAM90A20PA6NIJ5 464 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 NKX6-3A6NJ46 265 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 A6NJ64 397 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 FAM90A8PA6NJQ4 464 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 FAM90A7PA6NKC0 464 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 FAM90A22PA8MWA6 464 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 FAM90A12PA8MX19 464 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 FAM90A5PA8MXJ8 464 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 FAM90A23PA8MXZ1 464 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 PPIAL4DF5H284 164 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 C3orf80F5H4A9 247 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 LGALS8O00214 317 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 SH2D1BO14796 132 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 OR7C1O76099 320 aaPredicted RBP10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 LY6HO94772 140 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 KNG1P01042 644 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 LHBP01229 141 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 IGHV4-39P01824 125 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 CHRM2P08172 466 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 FAM90A15PP0C7V4 464 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 FAM90A13PP0C7W8 464 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 FAM90A14PP0C7W9 464 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 FAM90A24PP0C7X0 464 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 PPIAL4FP0DN26 164 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 MUC1P15941 1255 aaPredicted RBP10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 VEGFCP49767 419 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 PLA2G7Q13093 441 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 TAF9Q16594 264 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 MPV17LQ2QL34 196 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 SPANXN2Q5MJ10 180 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 TMEM69Q5SWH9 247 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 CNIH2Q6PI25 160 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 BAIAP2L2Q6UXY1 529 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 LINC00299Q6ZSB3 139 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 IL17RELQ6ZVW7 336 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 DIRAS2Q96HU8 199 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 WDFY2Q96P53 400 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 NEDD4LQ96PU5 975 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 NICN1Q9BSH3 213 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 TM2D1Q9BX74 207 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 LPAR5Q9H1C0 372 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 MIXL1Q9H2W2 232 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 CHODLQ9H9P2 273 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 IL36RNQ9UBH0 155 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 OR14J1Q9UGF5 321 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 WIPI2Q9Y4P8 454 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 PPIAL4AQ9Y536 164 aa10.08□□□□□ -0.8
SHKBP1-213ENST00000597325 WNK1Q9H4A3 2382 aa10.07□□□□□ -0.8
SHKBP1-213ENST00000597325 ISPDA4D126 451 aa10.07□□□□□ -0.8
SHKBP1-213ENST00000597325 OR2AT4A6NND4 320 aa10.07□□□□□ -0.8
SHKBP1-213ENST00000597325 LYNX1G3V0Z9 82 aa10.07□□□□□ -0.8
SHKBP1-213ENST00000597325 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.07□□□□□ -0.8
SHKBP1-213ENST00000597325 GEMIN2O14893 280 aaKnown RBP10.07□□□□□ -0.8
SHKBP1-213ENST00000597325 PPIHO43447 177 aaKnown RBP10.07□□□□□ -0.8
SHKBP1-213ENST00000597325 RP2O75695 350 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms