RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 OR10AC1Q8NH08 325 aa12.84□□□□□ -0.35
LIM2-202ENST00000596399 EME1Q96AY2 570 aa12.84□□□□□ -0.35
LIM2-202ENST00000596399 GABARAPL1Q9H0R8 117 aa12.84□□□□□ -0.35
LIM2-202ENST00000596399 RIBC2Q9H4K1 309 aa12.84□□□□□ -0.35
LIM2-202ENST00000596399 TCRBV4S1A1TA0A5B7 111 aa12.83□□□□□ -0.36
LIM2-202ENST00000596399 K7EIL1 84 aa12.83□□□□□ -0.36
LIM2-202ENST00000596399 OR2H2O95918 312 aa12.83□□□□□ -0.36
LIM2-202ENST00000596399 AMY1AP04745 511 aa12.83□□□□□ -0.36
LIM2-202ENST00000596399 AMY2AP04746 511 aa12.83□□□□□ -0.36
LIM2-202ENST00000596399 PF4V1P10720 104 aa12.83□□□□□ -0.36
LIM2-202ENST00000596399 ATF1P18846 271 aa12.83□□□□□ -0.36
LIM2-202ENST00000596399 AZGP1P25311 298 aaKnown RBP12.83□□□□□ -0.36
LIM2-202ENST00000596399 NANOS3P60323 173 aaKnown RBP12.83□□□□□ -0.36
LIM2-202ENST00000596399 KRTAP10-11P60412 298 aa12.83□□□□□ -0.36
LIM2-202ENST00000596399 PDZK1IP1Q13113 114 aa12.83□□□□□ -0.36
LIM2-202ENST00000596399 ZDHHC13Q8IUH4 622 aa12.83□□□□□ -0.36
LIM2-202ENST00000596399 Q8IYB0 196 aa12.83□□□□□ -0.36
LIM2-202ENST00000596399 ENTHD1Q8IYW4 607 aa12.83□□□□□ -0.36
LIM2-202ENST00000596399 OR5D18Q8NGL1 313 aa12.83□□□□□ -0.36
LIM2-202ENST00000596399 PP6455Q8WZ26 134 aa12.83□□□□□ -0.36
LIM2-202ENST00000596399 STMN2Q93045 179 aa12.83□□□□□ -0.36
LIM2-202ENST00000596399 MYDGFQ969H8 173 aa12.83□□□□□ -0.36
LIM2-202ENST00000596399 SEBOXQ9HB31 216 aaPredicted RBP12.83□□□□□ -0.36
LIM2-202ENST00000596399 ZNF286AQ9HBT8 521 aa12.83□□□□□ -0.36
LIM2-202ENST00000596399 HMG20AQ9NP66 347 aa12.83□□□□□ -0.36
LIM2-202ENST00000596399 FRRS1LQ9P0K9 344 aa12.83□□□□□ -0.36
LIM2-202ENST00000596399 DPM3Q9P2X0 92 aa12.83□□□□□ -0.36
LIM2-202ENST00000596399 UBE2J1Q9Y385 318 aaPredicted RBP12.83□□□□□ -0.36
LIM2-202ENST00000596399 DNAH9Q9NYC9 4486 aa12.83□□□□□ -0.36
LIM2-202ENST00000596399 RYR3Q15413 4870 aa12.82□□□□□ -0.36
LIM2-202ENST00000596399 IGLV1-47P01700 117 aa12.82□□□□□ -0.36
LIM2-202ENST00000596399 UBCP0CG48 685 aaKnown RBP12.82□□□□□ -0.36
LIM2-202ENST00000596399 ERP29P30040 261 aaKnown RBP12.82□□□□□ -0.36
LIM2-202ENST00000596399 BDH1Q02338 343 aa12.82□□□□□ -0.36
LIM2-202ENST00000596399 SCN1BQ07699 218 aa12.82□□□□□ -0.36
LIM2-202ENST00000596399 DNAAF1Q8NEP3 725 aa12.82□□□□□ -0.36
LIM2-202ENST00000596399 OR51A4Q8NGJ6 313 aa12.82□□□□□ -0.36
LIM2-202ENST00000596399 OR2G2Q8NGZ5 317 aa12.82□□□□□ -0.36
LIM2-202ENST00000596399 SLC25A33Q9BSK2 321 aa12.82□□□□□ -0.36
LIM2-202ENST00000596399 EXOSC4Q9NPD3 245 aaKnown RBP12.82□□□□□ -0.36
LIM2-202ENST00000596399 AP4S1Q9Y587 144 aa12.82□□□□□ -0.36
LIM2-202ENST00000596399 CYB5AP00167 134 aa12.81□□□□□ -0.36
LIM2-202ENST00000596399 ALDOBP05062 364 aa12.81□□□□□ -0.36
LIM2-202ENST00000596399 ZNF20P17024 532 aa12.81□□□□□ -0.36
LIM2-202ENST00000596399 FASP25445 335 aa12.81□□□□□ -0.36
LIM2-202ENST00000596399 IL18R1Q13478 541 aa12.81□□□□□ -0.36
LIM2-202ENST00000596399 SPIN3Q5JUX0 258 aa12.81□□□□□ -0.36
LIM2-202ENST00000596399 HEPN1Q6WQI6 88 aa12.81□□□□□ -0.36
LIM2-202ENST00000596399 ZBTB49Q6ZSB9 765 aa12.81□□□□□ -0.36
LIM2-202ENST00000596399 FAM220AQ7Z4H9 259 aa12.81□□□□□ -0.36
LIM2-202ENST00000596399 CCDC54Q8NEL0 328 aa12.81□□□□□ -0.36
LIM2-202ENST00000596399 C10orf35Q96D05 121 aa12.81□□□□□ -0.36
LIM2-202ENST00000596399 OPALINQ96PE5 141 aa12.81□□□□□ -0.36
LIM2-202ENST00000596399 LIN7BQ9HAP6 207 aa12.81□□□□□ -0.36
LIM2-202ENST00000596399 AASSQ9UDR5 926 aa12.81□□□□□ -0.36
LIM2-202ENST00000596399 KIAA2026Q5HYC2 2103 aa12.8□□□□□ -0.36
LIM2-202ENST00000596399 TRGV10A0A0A0MS01 117 aa12.8□□□□□ -0.36
LIM2-202ENST00000596399 WI2-2373I1.2A0A1W2PRP0 233 aa12.8□□□□□ -0.36
LIM2-202ENST00000596399 SAC3D1A6NKF1 404 aa12.8□□□□□ -0.36
LIM2-202ENST00000596399 SH2D1BO14796 132 aa12.8□□□□□ -0.36
LIM2-202ENST00000596399 IGHV3-7P01780 117 aa12.8□□□□□ -0.36
LIM2-202ENST00000596399 PF4P02776 101 aa12.8□□□□□ -0.36
LIM2-202ENST00000596399 RBM39Q14498 530 aaKnown RBP12.8□□□□□ -0.36
LIM2-202ENST00000596399 KHDC1LQ5JSQ8 128 aa12.8□□□□□ -0.36
LIM2-202ENST00000596399 C9orf152Q5JTZ5 239 aa12.8□□□□□ -0.36
LIM2-202ENST00000596399 C11orf87Q6NUJ2 197 aa12.8□□□□□ -0.36
LIM2-202ENST00000596399 UTS2BQ765I0 119 aa12.8□□□□□ -0.36
LIM2-202ENST00000596399 OR8J1Q8NGP2 316 aa12.8□□□□□ -0.36
LIM2-202ENST00000596399 OR13C9Q8NGT0 318 aa12.8□□□□□ -0.36
LIM2-202ENST00000596399 CORO2AQ92828 525 aa12.8□□□□□ -0.36
LIM2-202ENST00000596399 COQ2Q96H96 371 aa12.8□□□□□ -0.36
LIM2-202ENST00000596399 RBM14Q96PK6 669 aaKnown RBP12.8□□□□□ -0.36
LIM2-202ENST00000596399 GABARAPL3Q9BY60 117 aa12.8□□□□□ -0.36
LIM2-202ENST00000596399 PPIL3Q9H2H8 161 aaKnown RBP12.8□□□□□ -0.36
LIM2-202ENST00000596399 GAL3ST2Q9H3Q3 398 aa12.8□□□□□ -0.36
LIM2-202ENST00000596399 INPP5EQ9NRR6 644 aa12.8□□□□□ -0.36
LIM2-202ENST00000596399 GLS2Q9UI32 602 aa12.8□□□□□ -0.36
LIM2-202ENST00000596399 HHLA2Q9UM44 414 aa12.8□□□□□ -0.36
LIM2-202ENST00000596399 OAZ3Q9UMX2 235 aa12.8□□□□□ -0.36
LIM2-202ENST00000596399 TSSC4Q9Y5U2 329 aaPredicted RBP12.8□□□□□ -0.36
LIM2-202ENST00000596399 ODAMA1E959 279 aa12.79□□□□□ -0.36
LIM2-202ENST00000596399 LEUTXA8MZ59 168 aa12.79□□□□□ -0.36
LIM2-202ENST00000596399 LY6LH3BQJ8 138 aa12.79□□□□□ -0.36
LIM2-202ENST00000596399 BUB1B-PAK6H3BSN5 160 aa12.79□□□□□ -0.36
LIM2-202ENST00000596399 KDM4BO94953 1096 aa12.79□□□□□ -0.36
LIM2-202ENST00000596399 OR2F2O95006 317 aa12.79□□□□□ -0.36
LIM2-202ENST00000596399 ZNF44P15621 663 aa12.79□□□□□ -0.36
LIM2-202ENST00000596399 PRKACBP22694 351 aa12.79□□□□□ -0.36
LIM2-202ENST00000596399 LMO1P25800 156 aa12.79□□□□□ -0.36
LIM2-202ENST00000596399 HOXD3P31249 432 aaPredicted RBP12.79□□□□□ -0.36
LIM2-202ENST00000596399 BRS3P32247 399 aa12.79□□□□□ -0.36
LIM2-202ENST00000596399 OR3A4PP47883 348 aa12.79□□□□□ -0.36
LIM2-202ENST00000596399 CDC42P60953 191 aa12.79□□□□□ -0.36
LIM2-202ENST00000596399 KPNB1Q14974 876 aaKnown RBP12.79□□□□□ -0.36
LIM2-202ENST00000596399 ATXN7L3Q14CW9 347 aaPredicted RBP12.79□□□□□ -0.36
LIM2-202ENST00000596399 HLA-DRB5Q30154 266 aa12.79□□□□□ -0.36
LIM2-202ENST00000596399 TPTE2P1Q5T6R2 138 aa12.79□□□□□ -0.36
LIM2-202ENST00000596399 TMEM244Q5VVB8 128 aa12.79□□□□□ -0.36
LIM2-202ENST00000596399 Q6P435 159 aa12.79□□□□□ -0.36
LIM2-202ENST00000596399 LHFPL2Q6ZUX7 228 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms