RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 RAB1BQ9H0U4 201 aa11.01□□□□□ -0.65
SHKBP1-209ENST00000595803 SAP30LQ9HAJ7 183 aa11.01□□□□□ -0.65
SHKBP1-209ENST00000595803 GCM1Q9NP62 436 aa11.01□□□□□ -0.65
SHKBP1-209ENST00000595803 RNF7Q9UBF6 113 aa11.01□□□□□ -0.65
SHKBP1-209ENST00000595803 PPP1R3CQ9UQK1 317 aa11.01□□□□□ -0.65
SHKBP1-209ENST00000595803 LRRC30A6NM36 301 aa11□□□□□ -0.65
SHKBP1-209ENST00000595803 SH2D1BO14796 132 aa11□□□□□ -0.65
SHKBP1-209ENST00000595803 RBBP9O75884 186 aa11□□□□□ -0.65
SHKBP1-209ENST00000595803 OR7C1O76099 320 aaPredicted RBP11□□□□□ -0.65
SHKBP1-209ENST00000595803 MELTFP08582 738 aa11□□□□□ -0.65
SHKBP1-209ENST00000595803 CSF3P09919 207 aa11□□□□□ -0.65
SHKBP1-209ENST00000595803 PTHLHP12272 177 aa11□□□□□ -0.65
SHKBP1-209ENST00000595803 IL7P13232 177 aa11□□□□□ -0.65
SHKBP1-209ENST00000595803 HIST1H1DP16402 221 aaKnown RBP11□□□□□ -0.65
SHKBP1-209ENST00000595803 FUT3P21217 361 aa11□□□□□ -0.65
SHKBP1-209ENST00000595803 DUSP1P28562 367 aa11□□□□□ -0.65
SHKBP1-209ENST00000595803 PPOXP50336 477 aa11□□□□□ -0.65
SHKBP1-209ENST00000595803 IKZF1Q13422 519 aa11□□□□□ -0.65
SHKBP1-209ENST00000595803 ARFRP1Q13795 201 aa11□□□□□ -0.65
SHKBP1-209ENST00000595803 PLAC9Q5JTB6 97 aa11□□□□□ -0.65
SHKBP1-209ENST00000595803 ACP7Q6ZNF0 438 aa11□□□□□ -0.65
SHKBP1-209ENST00000595803 OR52I2Q8NH67 350 aa11□□□□□ -0.65
SHKBP1-209ENST00000595803 TREM2Q9NZC2 230 aa11□□□□□ -0.65
SHKBP1-209ENST00000595803 HSF4Q9ULV5 492 aa11□□□□□ -0.65
SHKBP1-209ENST00000595803 TMEM235A6NFC5 223 aa10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 FOXI3A8MTJ6 420 aaPredicted RBP10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 C3orf80F5H4A9 247 aa10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 IFNL4K9M1U5 179 aa10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 WNT9BO14905 357 aa10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 PDCD6O75340 191 aa10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 CD8AP01732 235 aa10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 CD3GP09693 182 aa10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 DANCRP0C864 163 aa10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 GSTT2BP0CG30 244 aa10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 ZNF44P15621 663 aa10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 GNG2P59768 71 aa10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 MRPS15P82914 257 aaKnown RBP10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 DGCR2P98153 550 aa10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 IFITM3Q01628 133 aa10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 HACD4Q5VWC8 232 aa10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 ZNF57Q68EA5 555 aaPredicted RBP10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 Q8TCH9 128 aa10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 SMIM4Q8WVI0 70 aa10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 NINJ1Q92982 152 aa10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 SEH1LQ96EE3 360 aa10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 FAAP24Q9BTP7 215 aa10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 TRAF4Q9BUZ4 470 aaPredicted RBP10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 SCPEP1Q9HB40 452 aa10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 SPACA1Q9HBV2 294 aa10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 HES4Q9HCC6 221 aa10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 DNAJB11Q9UBS4 358 aa10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 OR14J1Q9UGF5 321 aa10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 LAMP3Q9UQV4 416 aa10.99□□□□□ -0.65
SHKBP1-209ENST00000595803 LINC00854A0A1B0GVQ3 168 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 A0A1W2PPR1 153 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 MEIOCA2RUB1 952 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 ISPDA4D126 451 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 SERPINE3A8MV23 424 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 SRRM5B3KS81 715 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 MCRIP1C9JLW8 97 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 MFNGO00587 321 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 ORC5O43913 435 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 CYB5R3P00387 301 aaPredicted RBP10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 KNG1P01042 644 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 LHBP01229 141 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 SOD3P08294 240 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 CHATP28329 748 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 DEFA1P59665 94 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 DEFA3P59666 94 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 GUCA2AQ02747 115 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 ZNF146Q15072 292 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 SMIM21Q3B7S5 101 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 SPIN3Q5JUX0 258 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 STEAP3Q658P3 488 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 SIGIRRQ6IA17 410 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 BRICD5Q6PL45 260 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 C6orf201Q7Z4U5 140 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 DTX2Q86UW9 622 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 FAM90A1Q86YD7 464 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 LYSMD2Q8IV50 215 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 C1orf87Q8N0U7 546 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 GCSAMQ8N6F7 178 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 NEU4Q8WWR8 484 aaPredicted RBP10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 GCDHQ92947 438 aaPredicted RBP10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 YIPF5Q969M3 257 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 WDR13Q9H1Z4 485 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 IL36RNQ9UBH0 155 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 ELF5Q9UKW6 265 aaPredicted RBP10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 NPTNQ9Y639 398 aa10.98□□□□□ -0.65
SHKBP1-209ENST00000595803 IGHV1-69-2A0A0G2JMI3 117 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 A0A1W2PQ09 198 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 UBE2QL1A1L167 161 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 H7C417 338 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 CA11O75493 328 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 ECDO95905 644 aaPredicted RBP10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 HAND1O96004 215 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 HPXP02790 462 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 GLAP06280 429 aa10.97□□□□□ -0.65
SHKBP1-209ENST00000595803 LPLP06858 475 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms