RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 HAAOP46952 286 aa10.94□□□□□ -0.66
SHKBP1-208ENST00000595726 CEBPDP49716 269 aaPredicted RBP10.94□□□□□ -0.66
SHKBP1-208ENST00000595726 CAPZA1P52907 286 aa10.94□□□□□ -0.66
SHKBP1-208ENST00000595726 OR12D2P58182 307 aa10.94□□□□□ -0.66
SHKBP1-208ENST00000595726 ACBD7Q8N6N7 88 aa10.94□□□□□ -0.66
SHKBP1-208ENST00000595726 POC1AQ8NBT0 407 aa10.94□□□□□ -0.66
SHKBP1-208ENST00000595726 OR2G2Q8NGZ5 317 aa10.94□□□□□ -0.66
SHKBP1-208ENST00000595726 APH1BQ8WW43 257 aa10.94□□□□□ -0.66
SHKBP1-208ENST00000595726 RDH12Q96NR8 316 aa10.94□□□□□ -0.66
SHKBP1-208ENST00000595726 DUX3Q96PT4 197 aa10.94□□□□□ -0.66
SHKBP1-208ENST00000595726 MCRIP2Q9BUT9 160 aaKnown RBP10.94□□□□□ -0.66
SHKBP1-208ENST00000595726 HILPDAQ9Y5L2 63 aa10.94□□□□□ -0.66
SHKBP1-208ENST00000595726 J3QT63 122 aa10.93□□□□□ -0.66
SHKBP1-208ENST00000595726 IGHA1P01876 353 aa10.93□□□□□ -0.66
SHKBP1-208ENST00000595726 PGA5P0DJD9 388 aa10.93□□□□□ -0.66
SHKBP1-208ENST00000595726 CD24P25063 80 aa10.93□□□□□ -0.66
SHKBP1-208ENST00000595726 LUMP51884 338 aaPredicted RBP10.93□□□□□ -0.66
SHKBP1-208ENST00000595726 NANOS3P60323 173 aaKnown RBP10.93□□□□□ -0.66
SHKBP1-208ENST00000595726 ACTA2P62736 377 aa10.93□□□□□ -0.66
SHKBP1-208ENST00000595726 RPL31P62899 125 aaKnown RBP10.93□□□□□ -0.66
SHKBP1-208ENST00000595726 ACTG2P63267 376 aa10.93□□□□□ -0.66
SHKBP1-208ENST00000595726 ZNF273Q14593 569 aa10.93□□□□□ -0.66
SHKBP1-208ENST00000595726 FDX2Q6P4F2 183 aa10.93□□□□□ -0.66
SHKBP1-208ENST00000595726 C8orf86Q6ZUL3 223 aa10.93□□□□□ -0.66
SHKBP1-208ENST00000595726 KCTD20Q7Z5Y7 419 aa10.93□□□□□ -0.66
SHKBP1-208ENST00000595726 ZNF573Q86YE8 665 aa10.93□□□□□ -0.66
SHKBP1-208ENST00000595726 CCDC54Q8NEL0 328 aa10.93□□□□□ -0.66
SHKBP1-208ENST00000595726 ZNF671Q8TAW3 534 aa10.93□□□□□ -0.66
SHKBP1-208ENST00000595726 PELI1Q96FA3 418 aa10.93□□□□□ -0.66
SHKBP1-208ENST00000595726 C4orf36Q96KX1 117 aa10.93□□□□□ -0.66
SHKBP1-208ENST00000595726 Q96MT0 163 aa10.93□□□□□ -0.66
SHKBP1-208ENST00000595726 CHST5Q9GZS9 411 aa10.93□□□□□ -0.66
SHKBP1-208ENST00000595726 AMBNQ9NP70 447 aa10.93□□□□□ -0.66
SHKBP1-208ENST00000595726 FRRS1LQ9P0K9 344 aa10.93□□□□□ -0.66
SHKBP1-208ENST00000595726 ZNF222Q9UK12 451 aa10.93□□□□□ -0.66
SHKBP1-208ENST00000595726 MYRFQ9Y2G1 1151 aa10.93□□□□□ -0.66
SHKBP1-208ENST00000595726 RAMP3O60896 148 aa10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 SNRNP70P08621 437 aaKnown RBP10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 HTR1AP08908 422 aa10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 MPZP25189 248 aa10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 PEX2P28328 305 aa10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 SLC34A1Q06495 639 aa10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 RAB40BQ12829 278 aa10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 DYNC1I2Q13409 638 aaKnown RBP10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 GALEQ14376 348 aa10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 RCN1Q15293 331 aa10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 UBE2V2Q15819 145 aa10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 LRRC36Q1X8D7 754 aa10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 ABCA11PQ4W5N1 156 aa10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 LPCAT4Q643R3 524 aa10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 ACP7Q6ZNF0 438 aa10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 CALHM1Q8IU99 346 aa10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 SBSPONQ8IVN8 264 aa10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 RDH10Q8IZV5 341 aa10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 ZNF555Q8NEP9 628 aa10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 TRMT10AQ8TBZ6 339 aaKnown RBP10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 FOXRED1Q96CU9 486 aaPredicted RBP10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 C10orf35Q96D05 121 aa10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 ZNF488Q96MN9 340 aa10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 ADI1Q9BV57 179 aa10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 ALG8Q9BVK2 526 aa10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 RASL12Q9NYN1 266 aa10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 ZMAT5Q9UDW3 170 aaKnown RBP10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 POLDIP2Q9Y2S7 368 aa10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 FRAS1Q86XX4 4008 aa10.92□□□□□ -0.66
SHKBP1-208ENST00000595726 IGKV1-27A0A075B6S5 117 aa10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 ODF3BA8MYP8 253 aa10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 ANKRD65E5RJM6 399 aa10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 J3QLW9 94 aa10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 NOS1APO75052 506 aaPredicted RBP10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 WBP4O75554 376 aaKnown RBP10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 GATBO75879 557 aaKnown RBP10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 FADS2O95864 444 aaKnown RBP10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 ISG15P05161 165 aa10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 ZNF19P17023 458 aa10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 ECI1P42126 302 aa10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 CCR9P51686 369 aa10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 SMIM21Q3B7S5 101 aa10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 ZNF691Q5VV52 312 aa10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 TMEM244Q5VVB8 128 aa10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 ZNF329Q86UD4 541 aa10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 LHFPL3Q86UP9 236 aa10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 SYS1Q8N2H4 156 aa10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 OR51D1Q8NGF3 324 aa10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 OR52I1Q8NGK6 324 aa10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 PP6455Q8WZ26 134 aa10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 ADAT3Q96EY9 351 aaPredicted RBP10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 MRPL48Q96GC5 212 aaKnown RBP10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 NRIP2Q9BQI9 281 aa10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 PKIBQ9C010 78 aa10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 ISG20L2Q9H9L3 353 aaKnown RBP10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 HES4Q9HCC6 221 aa10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 MRPS18AQ9NVS2 196 aaKnown RBP10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 ERVK13-1Q9NX77 482 aa10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 SLC7A11Q9UPY5 501 aa10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 RPL36Q9Y3U8 105 aaKnown RBP10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 TBL2Q9Y4P3 447 aaKnown RBP10.91□□□□□ -0.66
SHKBP1-208ENST00000595726 FAM230AA0A1W2PPH8 454 aa10.9□□□□□ -0.66
SHKBP1-208ENST00000595726 FAM90A22PA8MWA6 464 aa10.9□□□□□ -0.66
SHKBP1-208ENST00000595726 PIPP12273 146 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms