RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 B3GNT2Q9NY97 397 aa10.77□□□□□ -0.69
SCAF1-202ENST00000595242 ZNF221Q9UK13 617 aa10.77□□□□□ -0.69
SCAF1-202ENST00000595242 IGHV2OR16-5A0A0B4J2B6 119 aa10.76□□□□□ -0.69
SCAF1-202ENST00000595242 GMDSO60547 372 aa10.76□□□□□ -0.69
SCAF1-202ENST00000595242 PRAF2O60831 178 aa10.76□□□□□ -0.69
SCAF1-202ENST00000595242 RP2O75695 350 aa10.76□□□□□ -0.69
SCAF1-202ENST00000595242 KNG1P01042 644 aa10.76□□□□□ -0.69
SCAF1-202ENST00000595242 CHRM2P08172 466 aa10.76□□□□□ -0.69
SCAF1-202ENST00000595242 H2AFB2P0C5Z0 115 aa10.76□□□□□ -0.69
SCAF1-202ENST00000595242 RRAS2P62070 204 aaPredicted RBP10.76□□□□□ -0.69
SCAF1-202ENST00000595242 MRPS11P82912 194 aaKnown RBP10.76□□□□□ -0.69
SCAF1-202ENST00000595242 OR8B8Q15620 311 aa10.76□□□□□ -0.69
SCAF1-202ENST00000595242 GFOD2Q3B7J2 385 aa10.76□□□□□ -0.69
SCAF1-202ENST00000595242 AWAT2Q6E213 333 aa10.76□□□□□ -0.69
SCAF1-202ENST00000595242 ANGPTL5Q86XS5 388 aa10.76□□□□□ -0.69
SCAF1-202ENST00000595242 TCTE3Q8IZS6 198 aa10.76□□□□□ -0.69
SCAF1-202ENST00000595242 BCL6BQ8N143 479 aaPredicted RBP10.76□□□□□ -0.69
SCAF1-202ENST00000595242 TMEM229BQ8NBD8 167 aa10.76□□□□□ -0.69
SCAF1-202ENST00000595242 KCNG3Q8TAE7 436 aa10.76□□□□□ -0.69
SCAF1-202ENST00000595242 REEP6Q96HR9 211 aa10.76□□□□□ -0.69
SCAF1-202ENST00000595242 LPAR5Q9H1C0 372 aa10.76□□□□□ -0.69
SCAF1-202ENST00000595242 C20orf85Q9H1P6 137 aa10.76□□□□□ -0.69
SCAF1-202ENST00000595242 ZNF69Q9UC07 566 aa10.76□□□□□ -0.69
SCAF1-202ENST00000595242 N6AMT1Q9Y5N5 214 aa10.76□□□□□ -0.69
SCAF1-202ENST00000595242 MMP24Q9Y5R2 645 aa10.76□□□□□ -0.69
SCAF1-202ENST00000595242 DOCK11Q5JSL3 2073 aa10.76□□□□□ -0.69
SCAF1-202ENST00000595242 PLXNB1O43157 2135 aa10.76□□□□□ -0.69
SCAF1-202ENST00000595242 CLDN34H7C241 214 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 NDUFB6O95139 128 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 LCATP04180 440 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 CD74P04233 296 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 HCKP08631 526 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 PATE4P0C8F1 98 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 AKAIN1P0CW23 69 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 CBR1P16152 277 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 FAHP16930 419 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 ACKR3P25106 362 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 ARR3P36575 388 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 OR3A4PP47883 348 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 CCR6P51684 374 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 RAB25P57735 213 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 GUCA2AQ02747 115 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 RIPPLY1Q0D2K3 151 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 CNN3Q15417 329 aaKnown RBP10.75□□□□□ -0.69
SCAF1-202ENST00000595242 SLC9A3R2Q15599 337 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 KISS1Q15726 138 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 UBE2V2Q15819 145 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 MSMPQ1L6U9 139 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 PCGF3Q3KNV8 242 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 MOGAT2Q3SYC2 334 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 AVPI1Q5T686 147 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 OR10K2Q6IF99 312 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 GLIPR1L1Q6UWM5 242 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 RNF144BQ7Z419 303 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 FAM89BQ8N5H3 189 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 PNLDC1Q8NA58 520 aaKnown RBP10.75□□□□□ -0.69
SCAF1-202ENST00000595242 CPEB3Q8NE35 698 aaKnown RBP10.75□□□□□ -0.69
SCAF1-202ENST00000595242 CPNE2Q96FN4 548 aaPredicted RBP10.75□□□□□ -0.69
SCAF1-202ENST00000595242 ZNF48Q96MX3 618 aaPredicted RBP10.75□□□□□ -0.69
SCAF1-202ENST00000595242 TECTBQ96PL2 329 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 CITED1Q99966 193 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 NOX3Q9HBY0 568 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 NEK6Q9HC98 313 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 NUP50Q9UKX7 468 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 ANAPC10Q9UM13 185 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 PIGLQ9Y2B2 252 aa10.75□□□□□ -0.69
SCAF1-202ENST00000595242 FOXI3A8MTJ6 420 aaPredicted RBP10.74□□□□□ -0.69
SCAF1-202ENST00000595242 TIMM23O14925 209 aa10.74□□□□□ -0.69
SCAF1-202ENST00000595242 CDC14BO60729 498 aa10.74□□□□□ -0.69
SCAF1-202ENST00000595242 PEX14O75381 377 aa10.74□□□□□ -0.69
SCAF1-202ENST00000595242 GSTP1P09211 210 aaKnown RBP10.74□□□□□ -0.69
SCAF1-202ENST00000595242 PRKACBP22694 351 aa10.74□□□□□ -0.69
SCAF1-202ENST00000595242 RCVRNP35243 200 aa10.74□□□□□ -0.69
SCAF1-202ENST00000595242 RBMXP38159 391 aaKnown RBP10.74□□□□□ -0.69
SCAF1-202ENST00000595242 TAS2R19P59542 299 aa10.74□□□□□ -0.69
SCAF1-202ENST00000595242 GSG1Q2KHT4 349 aa10.74□□□□□ -0.69
SCAF1-202ENST00000595242 CD276Q5ZPR3 534 aa10.74□□□□□ -0.69
SCAF1-202ENST00000595242 TMEM53Q6P2H8 277 aa10.74□□□□□ -0.69
SCAF1-202ENST00000595242 BRICD5Q6PL45 260 aa10.74□□□□□ -0.69
SCAF1-202ENST00000595242 KIR3DL3Q8N743 410 aa10.74□□□□□ -0.69
SCAF1-202ENST00000595242 OR4C16Q8NGL9 310 aa10.74□□□□□ -0.69
SCAF1-202ENST00000595242 OR10R2Q8NGX6 335 aa10.74□□□□□ -0.69
SCAF1-202ENST00000595242 SYT3Q9BQG1 590 aa10.74□□□□□ -0.69
SCAF1-202ENST00000595242 TM2D1Q9BX74 207 aa10.74□□□□□ -0.69
SCAF1-202ENST00000595242 CST11Q9H112 138 aa10.74□□□□□ -0.69
SCAF1-202ENST00000595242 OPA3Q9H6K4 179 aa10.74□□□□□ -0.69
SCAF1-202ENST00000595242 MRPL15Q9P015 296 aaKnown RBP10.74□□□□□ -0.69
SCAF1-202ENST00000595242 TRAV6A0A075B6T7 132 aa10.73□□□□□ -0.69
SCAF1-202ENST00000595242 LOC100509620A0A075B734 347 aa10.73□□□□□ -0.69
SCAF1-202ENST00000595242 A0A1B0GUS0 222 aa10.73□□□□□ -0.69
SCAF1-202ENST00000595242 ZNF503-AS2A6NEH8 195 aa10.73□□□□□ -0.69
SCAF1-202ENST00000595242 ICMTO60725 284 aa10.73□□□□□ -0.69
SCAF1-202ENST00000595242 CA11O75493 328 aa10.73□□□□□ -0.69
SCAF1-202ENST00000595242 IGHV2-5P01817 119 aa10.73□□□□□ -0.69
SCAF1-202ENST00000595242 IL5P05113 134 aa10.73□□□□□ -0.69
SCAF1-202ENST00000595242 SERPINA5P05154 406 aa10.73□□□□□ -0.69
SCAF1-202ENST00000595242 HOXB1P14653 301 aaPredicted RBP10.73□□□□□ -0.69
SCAF1-202ENST00000595242 MPZP25189 248 aa10.73□□□□□ -0.69
SCAF1-202ENST00000595242 PTGFRP43088 359 aa10.73□□□□□ -0.69
SCAF1-202ENST00000595242 ZP1P60852 638 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms