RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 MIOXQ9UGB7 285 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 A0A0C4DFX4 3053 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 C3orf85A0A1B0GTC6 90 aa11.46□□□□□ -0.57
VRK3-209ENST00000594948 CXorf65A6NEN9 183 aa11.46□□□□□ -0.57
VRK3-209ENST00000594948 GEMIN2O14893 280 aaKnown RBP11.46□□□□□ -0.57
VRK3-209ENST00000594948 MPPED1O15442 326 aa11.46□□□□□ -0.57
VRK3-209ENST00000594948 NRASP01111 189 aa11.46□□□□□ -0.57
VRK3-209ENST00000594948 FBP1P09467 338 aa11.46□□□□□ -0.57
VRK3-209ENST00000594948 OR13C7P0DN81 318 aa11.46□□□□□ -0.57
VRK3-209ENST00000594948 CEACAM1P13688 526 aa11.46□□□□□ -0.57
VRK3-209ENST00000594948 TCN2P20062 427 aa11.46□□□□□ -0.57
VRK3-209ENST00000594948 AADACP22760 399 aa11.46□□□□□ -0.57
VRK3-209ENST00000594948 BAXQ07812 192 aa11.46□□□□□ -0.57
VRK3-209ENST00000594948 TGIF1Q15583 401 aa11.46□□□□□ -0.57
VRK3-209ENST00000594948 TSPO2Q5TGU0 170 aa11.46□□□□□ -0.57
VRK3-209ENST00000594948 MRPL14Q6P1L8 145 aaKnown RBP11.46□□□□□ -0.57
VRK3-209ENST00000594948 SPSB3Q6PJ21 355 aa11.46□□□□□ -0.57
VRK3-209ENST00000594948 OR2G3Q8NGZ4 309 aa11.46□□□□□ -0.57
VRK3-209ENST00000594948 SIRT7Q9NRC8 400 aa11.46□□□□□ -0.57
VRK3-209ENST00000594948 LYRM2Q9NU23 88 aaPredicted RBP11.46□□□□□ -0.57
VRK3-209ENST00000594948 SLC7A11Q9UPY5 501 aa11.46□□□□□ -0.57
VRK3-209ENST00000594948 IGKV1-12A0A0C4DH73 117 aa11.46□□□□□ -0.58
VRK3-209ENST00000594948 GJE1A6NN92 205 aa11.46□□□□□ -0.58
VRK3-209ENST00000594948 GATCO43716 136 aaKnown RBP11.46□□□□□ -0.58
VRK3-209ENST00000594948 PPYP01298 95 aa11.46□□□□□ -0.58
VRK3-209ENST00000594948 IGKV1D-12P01611 117 aa11.46□□□□□ -0.58
VRK3-209ENST00000594948 HSPB1P04792 205 aaKnown RBP11.46□□□□□ -0.58
VRK3-209ENST00000594948 SRP19P09132 144 aaKnown RBP11.46□□□□□ -0.58
VRK3-209ENST00000594948 MYF5P13349 255 aa11.46□□□□□ -0.58
VRK3-209ENST00000594948 ATP6V0CP27449 155 aa11.46□□□□□ -0.58
VRK3-209ENST00000594948 NKX2-1P43699 371 aaPredicted RBP11.46□□□□□ -0.58
VRK3-209ENST00000594948 HTR5AP47898 357 aa11.46□□□□□ -0.58
VRK3-209ENST00000594948 RAC1P63000 192 aa11.46□□□□□ -0.58
VRK3-209ENST00000594948 PCOLCEQ15113 449 aa11.46□□□□□ -0.58
VRK3-209ENST00000594948 FAM209BQ5JX69 171 aa11.46□□□□□ -0.58
VRK3-209ENST00000594948 LINC00469Q8N7U9 141 aa11.46□□□□□ -0.58
VRK3-209ENST00000594948 Q8NFD4 153 aa11.46□□□□□ -0.58
VRK3-209ENST00000594948 CPT1CQ8TCG5 803 aa11.46□□□□□ -0.58
VRK3-209ENST00000594948 TP53RKQ96S44 253 aa11.46□□□□□ -0.58
VRK3-209ENST00000594948 PAPOLGQ9BWT3 736 aaKnown RBP11.46□□□□□ -0.58
VRK3-209ENST00000594948 WDR54Q9H977 334 aa11.46□□□□□ -0.58
VRK3-209ENST00000594948 ST3GAL6Q9Y274 331 aa11.46□□□□□ -0.58
VRK3-209ENST00000594948 hCG_38984A0A1B0GV85 526 aa11.45□□□□□ -0.58
VRK3-209ENST00000594948 IGSF23A1L1A6 192 aa11.45□□□□□ -0.58
VRK3-209ENST00000594948 NKX2-6A6NCS4 301 aa11.45□□□□□ -0.58
VRK3-209ENST00000594948 WRBO00258 174 aa11.45□□□□□ -0.58
VRK3-209ENST00000594948 BCAT2O15382 392 aaPredicted RBP11.45□□□□□ -0.58
VRK3-209ENST00000594948 HBE1P02100 147 aa11.45□□□□□ -0.58
VRK3-209ENST00000594948 FUT3P21217 361 aa11.45□□□□□ -0.58
VRK3-209ENST00000594948 RGS19P49795 217 aa11.45□□□□□ -0.58
VRK3-209ENST00000594948 RBM11P57052 281 aaKnown RBP11.45□□□□□ -0.58
VRK3-209ENST00000594948 RAB2AP61019 212 aa11.45□□□□□ -0.58
VRK3-209ENST00000594948 ZNF506Q5JVG8 444 aa11.45□□□□□ -0.58
VRK3-209ENST00000594948 PRAMEF20Q5VT98 475 aa11.45□□□□□ -0.58
VRK3-209ENST00000594948 DPPA2Q7Z7J5 298 aa11.45□□□□□ -0.58
VRK3-209ENST00000594948 WDR5BQ86VZ2 330 aa11.45□□□□□ -0.58
VRK3-209ENST00000594948 OR10G4Q8NGN3 311 aa11.45□□□□□ -0.58
VRK3-209ENST00000594948 OR11L1Q8NGX0 322 aa11.45□□□□□ -0.58
VRK3-209ENST00000594948 OR2AE1Q8NHA4 323 aa11.45□□□□□ -0.58
VRK3-209ENST00000594948 RBMXL1Q96E39 390 aaKnown RBP11.45□□□□□ -0.58
VRK3-209ENST00000594948 TMEM38BQ9NVV0 291 aa11.45□□□□□ -0.58
VRK3-209ENST00000594948 DMRT1Q9Y5R6 373 aa11.45□□□□□ -0.58
VRK3-209ENST00000594948 PIGBOS1A0A0B4J2F0 54 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 FAM24AA6NFZ4 105 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 RPL36A-HNRNPH2H7BZ11 118 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 TXNL1O43396 289 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 ZIC3O60481 467 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 LCATP04180 440 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 CDX1P47902 265 aaPredicted RBP11.44□□□□□ -0.58
VRK3-209ENST00000594948 OR2B8PP59922 312 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 FOXO1Q12778 655 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 PIGYQ3MUY2 71 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 TMEM252Q8N6L7 170 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 IL22RA2Q969J5 263 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 UCN2Q96RP3 112 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 TOLLIPQ9H0E2 274 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 SH2D2AQ9NP31 389 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 ZNF581Q9P0T4 197 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 TINAGQ9UJW2 476 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 DKKL1Q9UK85 242 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 PUS1Q9Y606 427 aaKnown RBP eCLIP11.44□□□□□ -0.58
VRK3-209ENST00000594948 IGHV3-15A0A0B4J1V0 119 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 ZNF724A8MTY0 619 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 H3BQ15 152 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 HSD17B6O14756 317 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 VAMP2P63027 116 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 KIAA0141Q14154 515 aaPredicted RBP11.44□□□□□ -0.58
VRK3-209ENST00000594948 OR8G1Q15617 311 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 TRIM61Q5EBN2 209 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 DNLZQ5SXM8 178 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 RAET1LQ5VY80 246 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 ZNF774Q6NX45 483 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 PPP1R3BQ86XI6 285 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 ZNF695Q8IW36 515 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 SELENOHQ8IZQ5 122 aaKnown RBP11.44□□□□□ -0.58
VRK3-209ENST00000594948 OR13D1Q8NGV5 346 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 DYRK2Q92630 601 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 MR1Q95460 341 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 RARRES2Q99969 163 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 UBE2J1Q9Y385 318 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms