RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 ALG8Q9BVK2 526 aa11.86□□□□□ -0.51
PNKP-202ENST00000593706 ISG20L2Q9H9L3 353 aaKnown RBP11.86□□□□□ -0.51
PNKP-202ENST00000593706 AMBNQ9NP70 447 aa11.86□□□□□ -0.51
PNKP-202ENST00000593706 INPP5EQ9NRR6 644 aa11.86□□□□□ -0.51
PNKP-202ENST00000593706 ERVK13-1Q9NX77 482 aa11.86□□□□□ -0.51
PNKP-202ENST00000593706 MTCH1Q9NZJ7 389 aa11.86□□□□□ -0.51
PNKP-202ENST00000593706 E9PI62 339 aa11.85□□□□□ -0.51
PNKP-202ENST00000593706 H3BUI4 141 aa11.85□□□□□ -0.51
PNKP-202ENST00000593706 K7N7A8 449 aa11.85□□□□□ -0.51
PNKP-202ENST00000593706 GATBO75879 557 aaKnown RBP11.85□□□□□ -0.51
PNKP-202ENST00000593706 BAG2O95816 211 aa11.85□□□□□ -0.51
PNKP-202ENST00000593706 MPIG6BO95866 241 aa11.85□□□□□ -0.51
PNKP-202ENST00000593706 PF4P02776 101 aa11.85□□□□□ -0.51
PNKP-202ENST00000593706 FUT6P51993 359 aa11.85□□□□□ -0.51
PNKP-202ENST00000593706 EDDM3AQ14507 147 aa11.85□□□□□ -0.51
PNKP-202ENST00000593706 SMN1Q16637 294 aaKnown RBP11.85□□□□□ -0.51
PNKP-202ENST00000593706 TMEM244Q5VVB8 128 aa11.85□□□□□ -0.51
PNKP-202ENST00000593706 ZNF676Q8N7Q3 588 aa11.85□□□□□ -0.51
PNKP-202ENST00000593706 DNAAF1Q8NEP3 725 aa11.85□□□□□ -0.51
PNKP-202ENST00000593706 OR11H6Q8NGC7 330 aa11.85□□□□□ -0.51
PNKP-202ENST00000593706 OR52I1Q8NGK6 324 aa11.85□□□□□ -0.51
PNKP-202ENST00000593706 WIPF2Q8TF74 440 aaPredicted RBP11.85□□□□□ -0.51
PNKP-202ENST00000593706 Q96MT0 163 aa11.85□□□□□ -0.51
PNKP-202ENST00000593706 ZNF714Q96N38 554 aa11.85□□□□□ -0.51
PNKP-202ENST00000593706 WNT10AQ9GZT5 417 aa11.85□□□□□ -0.51
PNKP-202ENST00000593706 FAM230AA0A1W2PPH8 454 aa11.84□□□□□ -0.51
PNKP-202ENST00000593706 J3QLW9 94 aa11.84□□□□□ -0.51
PNKP-202ENST00000593706 ZNF737O75373 536 aa11.84□□□□□ -0.51
PNKP-202ENST00000593706 FADS2O95864 444 aaKnown RBP11.84□□□□□ -0.51
PNKP-202ENST00000593706 LIMS3P0CW19 117 aa11.84□□□□□ -0.51
PNKP-202ENST00000593706 LIMS4P0CW20 117 aa11.84□□□□□ -0.51
PNKP-202ENST00000593706 IGLL1P15814 213 aa11.84□□□□□ -0.51
PNKP-202ENST00000593706 ZNF19P17023 458 aa11.84□□□□□ -0.51
PNKP-202ENST00000593706 JUNBP17275 347 aaPredicted RBP11.84□□□□□ -0.51
PNKP-202ENST00000593706 AZGP1P25311 298 aaKnown RBP11.84□□□□□ -0.51
PNKP-202ENST00000593706 PEX2P28328 305 aa11.84□□□□□ -0.51
PNKP-202ENST00000593706 DYNLT3P51808 116 aa11.84□□□□□ -0.51
PNKP-202ENST00000593706 BLCAPP62952 87 aa11.84□□□□□ -0.51
PNKP-202ENST00000593706 ALKBH1Q13686 389 aaKnown RBP11.84□□□□□ -0.51
PNKP-202ENST00000593706 LDLRAD2Q5SZI1 272 aa11.84□□□□□ -0.51
PNKP-202ENST00000593706 ZNF691Q5VV52 312 aa11.84□□□□□ -0.51
PNKP-202ENST00000593706 LPCAT4Q643R3 524 aa11.84□□□□□ -0.51
PNKP-202ENST00000593706 Q6ZS46 218 aa11.84□□□□□ -0.51
PNKP-202ENST00000593706 LHFPL3Q86UP9 236 aa11.84□□□□□ -0.51
PNKP-202ENST00000593706 OR8H2Q8N162 312 aa11.84□□□□□ -0.51
PNKP-202ENST00000593706 OR5AU1Q8NGC0 362 aa11.84□□□□□ -0.51
PNKP-202ENST00000593706 CAPSLQ8WWF8 208 aa11.84□□□□□ -0.51
PNKP-202ENST00000593706 STMN2Q93045 179 aa11.84□□□□□ -0.51
PNKP-202ENST00000593706 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.84□□□□□ -0.51
PNKP-202ENST00000593706 SLC7A11Q9UPY5 501 aa11.84□□□□□ -0.51
PNKP-202ENST00000593706 DNAH9Q9NYC9 4486 aa11.84□□□□□ -0.51
PNKP-202ENST00000593706 ANKRD65E5RJM6 399 aa11.83□□□□□ -0.52
PNKP-202ENST00000593706 INMTO95050 263 aa11.83□□□□□ -0.52
PNKP-202ENST00000593706 ZFPL1O95159 310 aa11.83□□□□□ -0.52
PNKP-202ENST00000593706 CLIC3O95833 236 aa11.83□□□□□ -0.52
PNKP-202ENST00000593706 MT-ND2P03891 347 aa11.83□□□□□ -0.52
PNKP-202ENST00000593706 CHRM2P08172 466 aa11.83□□□□□ -0.52
PNKP-202ENST00000593706 HTR1AP08908 422 aa11.83□□□□□ -0.52
PNKP-202ENST00000593706 SLC35A2P78381 396 aa11.83□□□□□ -0.52
PNKP-202ENST00000593706 RCN1Q15293 331 aa11.83□□□□□ -0.52
PNKP-202ENST00000593706 KHDC1LQ5JSQ8 128 aa11.83□□□□□ -0.52
PNKP-202ENST00000593706 MINOS1Q5TGZ0 78 aa11.83□□□□□ -0.52
PNKP-202ENST00000593706 PACRGLQ8N7B6 248 aa11.83□□□□□ -0.52
PNKP-202ENST00000593706 SLAMF9Q96A28 289 aa11.83□□□□□ -0.52
PNKP-202ENST00000593706 FGGYQ96C11 551 aa11.83□□□□□ -0.52
PNKP-202ENST00000593706 AKR1E2Q96JD6 320 aa11.83□□□□□ -0.52
PNKP-202ENST00000593706 CEP19Q96LK0 163 aa11.83□□□□□ -0.52
PNKP-202ENST00000593706 ADI1Q9BV57 179 aa11.83□□□□□ -0.52
PNKP-202ENST00000593706 SEBOXQ9HB31 216 aaPredicted RBP11.83□□□□□ -0.52
PNKP-202ENST00000593706 FGF20Q9NP95 211 aaPredicted RBP11.83□□□□□ -0.52
PNKP-202ENST00000593706 HHLA2Q9UM44 414 aa11.83□□□□□ -0.52
PNKP-202ENST00000593706 RPL36Q9Y3U8 105 aaKnown RBP11.83□□□□□ -0.52
PNKP-202ENST00000593706 MINOS1-NBL1R4GNA1 71 aa11.83□□□□□ -0.52
PNKP-202ENST00000593706 IGHV2-26A0A0B4J1V2 119 aa11.82□□□□□ -0.52
PNKP-202ENST00000593706 hADV38S2A0JD32 116 aa11.82□□□□□ -0.52
PNKP-202ENST00000593706 ATF1P18846 271 aa11.82□□□□□ -0.52
PNKP-202ENST00000593706 RBP2P50120 134 aa11.82□□□□□ -0.52
PNKP-202ENST00000593706 ADARB1P78563 741 aaKnown RBP11.82□□□□□ -0.52
PNKP-202ENST00000593706 MEF2CQ06413 473 aaPredicted RBP11.82□□□□□ -0.52
PNKP-202ENST00000593706 IL18R1Q13478 541 aa11.82□□□□□ -0.52
PNKP-202ENST00000593706 LRRC36Q1X8D7 754 aa11.82□□□□□ -0.52
PNKP-202ENST00000593706 VAX1Q5SQQ9 334 aa11.82□□□□□ -0.52
PNKP-202ENST00000593706 SLC25A26Q70HW3 274 aa11.82□□□□□ -0.52
PNKP-202ENST00000593706 TCF23Q7RTU1 214 aa11.82□□□□□ -0.52
PNKP-202ENST00000593706 RNF144BQ7Z419 303 aa11.82□□□□□ -0.52
PNKP-202ENST00000593706 CENPVQ7Z7K6 275 aaPredicted RBP11.82□□□□□ -0.52
PNKP-202ENST00000593706 TRAPPC6BQ86SZ2 158 aa11.82□□□□□ -0.52
PNKP-202ENST00000593706 CNIH3Q8TBE1 160 aa11.82□□□□□ -0.52
PNKP-202ENST00000593706 RGP1Q92546 391 aaPredicted RBP11.82□□□□□ -0.52
PNKP-202ENST00000593706 EMG1Q92979 244 aaKnown RBP11.82□□□□□ -0.52
PNKP-202ENST00000593706 SPSB1Q96BD6 273 aa11.82□□□□□ -0.52
PNKP-202ENST00000593706 BORCS8Q96FH0 119 aa11.82□□□□□ -0.52
PNKP-202ENST00000593706 CLEC7AQ9BXN2 247 aa11.82□□□□□ -0.52
PNKP-202ENST00000593706 C8orf4Q9NR00 106 aa11.82□□□□□ -0.52
PNKP-202ENST00000593706 IL36RNQ9UBH0 155 aa11.82□□□□□ -0.52
PNKP-202ENST00000593706 LINC00312Q9Y6C7 94 aa11.82□□□□□ -0.52
PNKP-202ENST00000593706 SESN1Q9Y6P5 492 aa11.82□□□□□ -0.52
PNKP-202ENST00000593706 RYR3Q15413 4870 aa11.82□□□□□ -0.52
PNKP-202ENST00000593706 TRBV2A0A0J9YWF9 115 aa11.81□□□□□ -0.52
PNKP-202ENST00000593706 TMEM212A6NML5 194 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms