RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 IFNEQ86WN2 208 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 EID2Q8N6I1 236 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 CD177Q8N6Q3 437 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 DEFB124Q8NES8 71 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 OR6K3Q8NGY3 331 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 OR5P2Q8WZ92 322 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 TCEAL3Q969E4 200 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 TMBIM1Q969X1 311 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 RERGQ96A58 199 aaPredicted RBP3.71□□□□□ -1.82
SMAD4-216ENST00000593223 RBP7Q96R05 134 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 GPR22Q99680 433 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 TMED9Q9BVK6 235 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 FAIM2Q9BWQ8 316 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 HCAR1Q9BXC0 346 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 CDCA4Q9BXL8 241 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 NXF2Q9GZY0 626 aaKnown RBP3.71□□□□□ -1.82
SMAD4-216ENST00000593223 RRAGDQ9NQL2 400 aaPredicted RBP3.71□□□□□ -1.82
SMAD4-216ENST00000593223 CD84Q9UIB8 345 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 OR52A1Q9UKL2 312 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 VSIG4Q9Y279 399 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 NID2Q14112 1375 aa3.71□□□□□ -1.82
SMAD4-216ENST00000593223 COL6A6A6NMZ7 2263 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 FBN1P35555 2871 aaKnown RBP3.7□□□□□ -1.82
SMAD4-216ENST00000593223 PDZD2O15018 2839 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 MGAQ8IWI9 3026 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 TRAV9-2A0A087WT02 112 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 SMIM28A0A1B0GU29 152 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 A0A1W2PQ67 120 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 ZNF98A6NK75 572 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 CDIPTO14735 213 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 MRPS12O15235 138 aaKnown RBP3.7□□□□□ -1.82
SMAD4-216ENST00000593223 ENSAO43768 121 aaKnown RBP3.7□□□□□ -1.82
SMAD4-216ENST00000593223 RAD1O60671 282 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 ENTPD6O75354 484 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 SUPT3HO75486 399 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 CCNKO75909 580 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 GCGP01275 180 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 TYMSP04818 313 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 IGKV5-2P06315 115 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 CST2P09228 141 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 OR8U9P0C7N5 309 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 TBPP20226 339 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 CSRP1P21291 193 aaKnown RBP3.7□□□□□ -1.82
SMAD4-216ENST00000593223 HTR1EP28566 365 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 FGF9P31371 208 aaPredicted RBP3.7□□□□□ -1.82
SMAD4-216ENST00000593223 RPA3P35244 121 aaPredicted RBP3.7□□□□□ -1.82
SMAD4-216ENST00000593223 CRYBA4P53673 196 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 RAB25P57735 213 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 OR10A3P58181 314 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 RBX1P62877 108 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 CD164Q04900 197 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 OXA1LQ15070 435 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 ZIC1Q15915 447 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 WHAMMP3Q1A5X7 153 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 Q1RN00 199 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 KLHL12Q53G59 568 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 UNC50Q53HI1 259 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 ACER2Q5QJU3 275 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 RWDD4Q6NW29 188 aaKnown RBP3.7□□□□□ -1.82
SMAD4-216ENST00000593223 BAIAP2L2Q6UXY1 529 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 C3orf62Q6ZUJ4 267 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 TMEM144Q7Z5S9 345 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 SLC30A8Q8IWU4 369 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 OR6V1Q8N148 313 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 STX19Q8N4C7 294 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 CLDN22Q8N7P3 220 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 WDR31Q8NA23 367 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 MDS2Q8NDY4 140 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 TMEM161BQ8NDZ6 487 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 NTNG2Q96CW9 530 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 ZHX1-C8orf76Q96EF9 292 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 IMP4Q96G21 291 aaKnown RBP3.7□□□□□ -1.82
SMAD4-216ENST00000593223 MED8Q96G25 268 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 ANKRD36BP1Q96IX9 119 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 ADTRPQ96IZ2 230 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 NMUR2Q9GZQ4 415 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 TMEM38AQ9H6F2 299 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 SPANXA1Q9NS26 97 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 GLTPQ9NZD2 209 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 BTNL2Q9UIR0 455 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 HHLA2Q9UM44 414 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 SAMD4AQ9UPU9 718 aaKnown RBP3.7□□□□□ -1.82
SMAD4-216ENST00000593223 CACNA1DQ01668 2161 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 F8P00451 2351 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 MTORP42345 2549 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 SDK1Q7Z5N4 2213 aa3.7□□□□□ -1.82
SMAD4-216ENST00000593223 USP27XA6NNY8 438 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 H3BMQ9 156 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 AZIN1O14977 448 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 UBDO15205 165 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 NUPL2O15504 423 aaKnown RBP3.69□□□□□ -1.82
SMAD4-216ENST00000593223 FABP7O15540 132 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 ZNF253O75346 499 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 LYPD3O95274 346 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 TFPTP0C1Z6 253 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 ACSM4P0C7M7 580 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 CT45A6P0DMU7 189 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 CT45A5P0DMU8 189 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 CT45A7P0DMV0 189 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 ZNF17P17021 662 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms