RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 FGF12P61328 243 aa8.02□□□□□ -1.13
DDX39A-220ENST00000593008 COL10A1Q03692 680 aa8.02□□□□□ -1.13
DDX39A-220ENST00000593008 SCN1BQ07699 218 aa8.02□□□□□ -1.13
DDX39A-220ENST00000593008 IKZF1Q13422 519 aa8.02□□□□□ -1.13
DDX39A-220ENST00000593008 KCNJ8Q15842 424 aa8.02□□□□□ -1.13
DDX39A-220ENST00000593008 CNPY1Q3B7I2 92 aa8.02□□□□□ -1.13
DDX39A-220ENST00000593008 SMIM21Q3B7S5 101 aa8.02□□□□□ -1.13
DDX39A-220ENST00000593008 CHRFAM7AQ494W8 412 aa8.02□□□□□ -1.13
DDX39A-220ENST00000593008 NKAPLQ5M9Q1 402 aa8.02□□□□□ -1.13
DDX39A-220ENST00000593008 OLFML2AQ68BL7 652 aa8.02□□□□□ -1.13
DDX39A-220ENST00000593008 SIGIRRQ6IA17 410 aa8.02□□□□□ -1.13
DDX39A-220ENST00000593008 Q6P435 159 aa8.02□□□□□ -1.13
DDX39A-220ENST00000593008 CDH26Q8IXH8 852 aa8.02□□□□□ -1.13
DDX39A-220ENST00000593008 SAXO1Q8IYX7 474 aa8.02□□□□□ -1.13
DDX39A-220ENST00000593008 OSR2Q8N2R0 312 aa8.02□□□□□ -1.13
DDX39A-220ENST00000593008 ZSCAN4Q8NAM6 433 aaPredicted RBP8.02□□□□□ -1.13
DDX39A-220ENST00000593008 ZNF671Q8TAW3 534 aa8.02□□□□□ -1.13
DDX39A-220ENST00000593008 Q96M66 194 aa8.02□□□□□ -1.13
DDX39A-220ENST00000593008 SLIRPQ9GZT3 109 aaKnown RBP8.02□□□□□ -1.13
DDX39A-220ENST00000593008 LPAR5Q9H1C0 372 aa8.02□□□□□ -1.13
DDX39A-220ENST00000593008 MIXL1Q9H2W2 232 aa8.02□□□□□ -1.13
DDX39A-220ENST00000593008 ING3Q9NXR8 418 aa8.02□□□□□ -1.13
DDX39A-220ENST00000593008 IL36GQ9NZH8 169 aa8.02□□□□□ -1.13
DDX39A-220ENST00000593008 COMMD3Q9UBI1 195 aa8.02□□□□□ -1.13
DDX39A-220ENST00000593008 ELF5Q9UKW6 265 aaPredicted RBP8.02□□□□□ -1.13
DDX39A-220ENST00000593008 KCNS2Q9ULS6 477 aa8.02□□□□□ -1.13
DDX39A-220ENST00000593008 MAB21L2Q9Y586 359 aa8.02□□□□□ -1.13
DDX39A-220ENST00000593008 TRAV24A0A0B4J272 114 aa8.01□□□□□ -1.13
DDX39A-220ENST00000593008 FOXI3A8MTJ6 420 aaPredicted RBP8.01□□□□□ -1.13
DDX39A-220ENST00000593008 FAM157AC9JC47 383 aa8.01□□□□□ -1.13
DDX39A-220ENST00000593008 CTDSP2O14595 271 aa8.01□□□□□ -1.13
DDX39A-220ENST00000593008 PHF1O43189 567 aaPredicted RBP8.01□□□□□ -1.13
DDX39A-220ENST00000593008 ADAM20O43506 726 aa8.01□□□□□ -1.13
DDX39A-220ENST00000593008 PSPNO60542 156 aa8.01□□□□□ -1.13
DDX39A-220ENST00000593008 OR2H2O95918 312 aa8.01□□□□□ -1.13
DDX39A-220ENST00000593008 CYB5AP00167 134 aa8.01□□□□□ -1.13
DDX39A-220ENST00000593008 PTHLHP12272 177 aa8.01□□□□□ -1.13
DDX39A-220ENST00000593008 MDH2P40926 338 aaKnown RBP8.01□□□□□ -1.13
DDX39A-220ENST00000593008 RPS27AP62979 156 aaKnown RBP8.01□□□□□ -1.13
DDX39A-220ENST00000593008 ATXN7L3Q14CW9 347 aaPredicted RBP8.01□□□□□ -1.13
DDX39A-220ENST00000593008 FAM120AOSQ5T036 256 aa8.01□□□□□ -1.13
DDX39A-220ENST00000593008 ELP2Q6IA86 826 aa8.01□□□□□ -1.13
DDX39A-220ENST00000593008 Q6ZPA2 131 aa8.01□□□□□ -1.13
DDX39A-220ENST00000593008 C5orf24Q7Z6I8 188 aa8.01□□□□□ -1.13
DDX39A-220ENST00000593008 LRRC28Q86X40 367 aaPredicted RBP8.01□□□□□ -1.13
DDX39A-220ENST00000593008 LAX1Q8IWV1 398 aa8.01□□□□□ -1.13
DDX39A-220ENST00000593008 BPIFB2Q8N4F0 458 aa8.01□□□□□ -1.13
DDX39A-220ENST00000593008 TPRX1Q8N7U7 411 aa8.01□□□□□ -1.13
DDX39A-220ENST00000593008 SAMD12Q8N8I0 201 aa8.01□□□□□ -1.13
DDX39A-220ENST00000593008 LINC01356Q8N9X3 169 aa8.01□□□□□ -1.13
DDX39A-220ENST00000593008 ZNRF1Q8ND25 227 aa8.01□□□□□ -1.13
DDX39A-220ENST00000593008 Q8NFD4 153 aa8.01□□□□□ -1.13
DDX39A-220ENST00000593008 OR4S1Q8NGB4 309 aa8.01□□□□□ -1.13
DDX39A-220ENST00000593008 RAB1CQ92928 201 aa8.01□□□□□ -1.13
DDX39A-220ENST00000593008 GCDHQ92947 438 aaPredicted RBP8.01□□□□□ -1.13
DDX39A-220ENST00000593008 FOXRED1Q96CU9 486 aaPredicted RBP8.01□□□□□ -1.13
DDX39A-220ENST00000593008 S100A13Q99584 98 aa8.01□□□□□ -1.13
DDX39A-220ENST00000593008 BCL7BQ9BQE9 202 aa8.01□□□□□ -1.13
DDX39A-220ENST00000593008 TMEM59Q9BXS4 323 aa8.01□□□□□ -1.13
DDX39A-220ENST00000593008 BEX2Q9BXY8 128 aa8.01□□□□□ -1.13
DDX39A-220ENST00000593008 SHARPINQ9H0F6 387 aa8.01□□□□□ -1.13
DDX39A-220ENST00000593008 PPA2Q9H2U2 334 aa8.01□□□□□ -1.13
DDX39A-220ENST00000593008 CCDC59Q9P031 241 aaKnown RBP8.01□□□□□ -1.13
DDX39A-220ENST00000593008 ST3GAL6Q9Y274 331 aa8.01□□□□□ -1.13
DDX39A-220ENST00000593008 A0A075B6Q4 140 aa8□□□□□ -1.13
DDX39A-220ENST00000593008 TRAV39A0A0B4J263 110 aa8□□□□□ -1.13
DDX39A-220ENST00000593008 F5H0A9 414 aaPredicted RBP8□□□□□ -1.13
DDX39A-220ENST00000593008 SLC33A1O00400 549 aaPredicted RBP8□□□□□ -1.13
DDX39A-220ENST00000593008 ZNF737O75373 536 aa8□□□□□ -1.13
DDX39A-220ENST00000593008 OR7C1O76099 320 aaPredicted RBP8□□□□□ -1.13
DDX39A-220ENST00000593008 KNG1P01042 644 aa8□□□□□ -1.13
DDX39A-220ENST00000593008 CSTBP04080 98 aaKnown RBP8□□□□□ -1.13
DDX39A-220ENST00000593008 ZNF44P15621 663 aa8□□□□□ -1.13
DDX39A-220ENST00000593008 RPS2P15880 293 aaKnown RBP8□□□□□ -1.13
DDX39A-220ENST00000593008 ZFP36P26651 326 aaKnown RBP8□□□□□ -1.13
DDX39A-220ENST00000593008 PRDX2P32119 198 aa8□□□□□ -1.13
DDX39A-220ENST00000593008 OR3A1P47881 315 aa8□□□□□ -1.13
DDX39A-220ENST00000593008 VEGFCP49767 419 aa8□□□□□ -1.13
DDX39A-220ENST00000593008 RORCP51449 518 aa8□□□□□ -1.13
DDX39A-220ENST00000593008 LMO4P61968 165 aa8□□□□□ -1.13
DDX39A-220ENST00000593008 PRB3Q04118 309 aaPredicted RBP8□□□□□ -1.13
DDX39A-220ENST00000593008 MICBQ29980 383 aa8□□□□□ -1.13
DDX39A-220ENST00000593008 CR1LQ2VPA4 569 aa8□□□□□ -1.13
DDX39A-220ENST00000593008 PLAC9Q5JTB6 97 aa8□□□□□ -1.13
DDX39A-220ENST00000593008 ZNF788Q6ZQV5 615 aa8□□□□□ -1.13
DDX39A-220ENST00000593008 C17orf107Q6ZR85 190 aa8□□□□□ -1.13
DDX39A-220ENST00000593008 TMEM185AQ8NFB2 350 aa8□□□□□ -1.13
DDX39A-220ENST00000593008 OR51T1Q8NGJ9 327 aa8□□□□□ -1.13
DDX39A-220ENST00000593008 PLPPR1Q8TBJ4 325 aa8□□□□□ -1.13
DDX39A-220ENST00000593008 HDHD3Q9BSH5 251 aaPredicted RBP8□□□□□ -1.13
DDX39A-220ENST00000593008 DCTN5Q9BTE1 182 aa8□□□□□ -1.13
DDX39A-220ENST00000593008 ZNF665Q9H7R5 613 aa8□□□□□ -1.13
DDX39A-220ENST00000593008 ZMAT3Q9HA38 289 aaKnown RBP8□□□□□ -1.13
DDX39A-220ENST00000593008 PCDHB16Q9NRJ7 776 aa8□□□□□ -1.13
DDX39A-220ENST00000593008 RHBDL2Q9NX52 303 aa8□□□□□ -1.13
DDX39A-220ENST00000593008 CDC42EP3Q9UKI2 254 aa8□□□□□ -1.13
DDX39A-220ENST00000593008 CUBNO60494 3623 aa7.99□□□□□ -1.13
DDX39A-220ENST00000593008 B4DSR2 109 aa7.99□□□□□ -1.13
DDX39A-220ENST00000593008 C22orf46C9J442 243 aa7.99□□□□□ -1.13
DDX39A-220ENST00000593008 ZNF701M0R085 212 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms