RNA–Protein interactions for RNA: ENST00000592883.5

RFX2-223, Transcript of regulatory factor X2, human

TSL 4

Gene RFX2, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-223	ENST00000592883	WI2-2373I1.2	A0A1W2PRP0	233 aa		12.29	□□□□□ -0.44
RFX2-223	ENST00000592883	SULT1C4	O75897	302 aa		12.29	□□□□□ -0.44
RFX2-223	ENST00000592883	OR2H2	O95918	312 aa		12.29	□□□□□ -0.44
RFX2-223	ENST00000592883	IGLV1-47	P01700	117 aa		12.29	□□□□□ -0.44
RFX2-223	ENST00000592883	AMY1A	P04745	511 aa		12.29	□□□□□ -0.44
RFX2-223	ENST00000592883	AMY2A	P04746	511 aa		12.29	□□□□□ -0.44
RFX2-223	ENST00000592883	CDK2	P24941	298 aa		12.29	□□□□□ -0.44
RFX2-223	ENST00000592883	BRS3	P32247	399 aa		12.29	□□□□□ -0.44
RFX2-223	ENST00000592883	BDH1	Q02338	343 aa		12.29	□□□□□ -0.44
RFX2-223	ENST00000592883	KHDC1L	Q5JSQ8	128 aa		12.29	□□□□□ -0.44
RFX2-223	ENST00000592883	KDM4D	Q6B0I6	523 aa		12.29	□□□□□ -0.44
RFX2-223	ENST00000592883	CCDC54	Q8NEL0	328 aa		12.29	□□□□□ -0.44
RFX2-223	ENST00000592883	DNAAF1	Q8NEP3	725 aa		12.29	□□□□□ -0.44
RFX2-223	ENST00000592883	ZNF596	Q8TC21	504 aa		12.29	□□□□□ -0.44
RFX2-223	ENST00000592883	CAPSL	Q8WWF8	208 aa		12.29	□□□□□ -0.44
RFX2-223	ENST00000592883	PP6455	Q8WZ26	134 aa		12.29	□□□□□ -0.44
RFX2-223	ENST00000592883	RNF166	Q96A37	237 aa	Predicted RBP	12.29	□□□□□ -0.44
RFX2-223	ENST00000592883	RFT1	Q96AA3	541 aa		12.29	□□□□□ -0.44
RFX2-223	ENST00000592883	AKR1E2	Q96JD6	320 aa		12.29	□□□□□ -0.44
RFX2-223	ENST00000592883	RBM14	Q96PK6	669 aa	Known RBP	12.29	□□□□□ -0.44
RFX2-223	ENST00000592883	ZNF286A	Q9HBT8	521 aa		12.29	□□□□□ -0.44
RFX2-223	ENST00000592883	INPP5E	Q9NRR6	644 aa		12.29	□□□□□ -0.44
RFX2-223	ENST00000592883	GSTK1	Q9Y2Q3	226 aa		12.29	□□□□□ -0.44
RFX2-223	ENST00000592883	DNAH9	Q9NYC9	4486 aa		12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	TRGV10	A0A0A0MS01	117 aa		12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	LEUTX	A8MZ59	168 aa		12.28	□□□□□ -0.44
RFX2-223	ENST00000592883		G3V2T6	193 aa		12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	OR2F2	O95006	317 aa		12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	CYB5A	P00167	134 aa		12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	ATF1	P18846	271 aa		12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	HTR1F	P30939	366 aa		12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	POLR2I	P36954	125 aa	Known RBP	12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	GLIPR1	P48060	266 aa		12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	MTCP1	P56278	107 aa		12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	ZNF85	Q03923	595 aa		12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	AES	Q08117	197 aa		12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	TP53I3	Q53FA7	332 aa		12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	DEFB121	Q5J5C9	76 aa		12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	SPIN3	Q5JUX0	258 aa		12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	UTF1	Q5T230	341 aa		12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	OR52W1	Q6IF63	320 aa		12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	HEPN1	Q6WQI6	88 aa		12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	RNF144B	Q7Z419	303 aa		12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	RTN4RL2	Q86UN3	420 aa		12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	OR4X2	Q8NGF9	303 aa		12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	C10orf35	Q96D05	121 aa		12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	RCC1L	Q96I51	464 aa	Known RBP	12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	GAL3ST2	Q9H3Q3	398 aa		12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	HMG20A	Q9NP66	347 aa		12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	EXOSC4	Q9NPD3	245 aa	Known RBP	12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	GLS2	Q9UI32	602 aa		12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	GNG8	Q9UK08	70 aa		12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	HHLA2	Q9UM44	414 aa		12.28	□□□□□ -0.44
RFX2-223	ENST00000592883	IGKV1-12	A0A0C4DH73	117 aa		12.27	□□□□□ -0.45
RFX2-223	ENST00000592883	SH2D1B	O14796	132 aa		12.27	□□□□□ -0.45
RFX2-223	ENST00000592883	IGKV1D-12	P01611	117 aa		12.27	□□□□□ -0.45
RFX2-223	ENST00000592883	UBC	P0CG48	685 aa	Known RBP	12.27	□□□□□ -0.45
RFX2-223	ENST00000592883	HOXD3	P31249	432 aa	Predicted RBP	12.27	□□□□□ -0.45
RFX2-223	ENST00000592883	CDC42	P60953	191 aa		12.27	□□□□□ -0.45
RFX2-223	ENST00000592883	ISL1	P61371	349 aa		12.27	□□□□□ -0.45
RFX2-223	ENST00000592883	PDZK1IP1	Q13113	114 aa		12.27	□□□□□ -0.45
RFX2-223	ENST00000592883	ATP6AP1	Q15904	470 aa		12.27	□□□□□ -0.45
RFX2-223	ENST00000592883	C9orf152	Q5JTZ5	239 aa		12.27	□□□□□ -0.45
RFX2-223	ENST00000592883	LHFPL2	Q6ZUX7	228 aa		12.27	□□□□□ -0.45
RFX2-223	ENST00000592883	CORO2A	Q92828	525 aa		12.27	□□□□□ -0.45
RFX2-223	ENST00000592883	FGGY	Q96C11	551 aa		12.27	□□□□□ -0.45
RFX2-223	ENST00000592883	GABARAPL1	Q9H0R8	117 aa		12.27	□□□□□ -0.45
RFX2-223	ENST00000592883	ING3	Q9NXR8	418 aa		12.27	□□□□□ -0.45
RFX2-223	ENST00000592883	TAS2R3	Q9NYW6	316 aa		12.27	□□□□□ -0.45
RFX2-223	ENST00000592883	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	12.27	□□□□□ -0.45
RFX2-223	ENST00000592883	BUB1B-PAK6	H3BSN5	160 aa		12.26	□□□□□ -0.45
RFX2-223	ENST00000592883	PRKACB	P22694	351 aa		12.26	□□□□□ -0.45
RFX2-223	ENST00000592883	CD34	P28906	385 aa		12.26	□□□□□ -0.45
RFX2-223	ENST00000592883	ATP6V1E1	P36543	226 aa		12.26	□□□□□ -0.45
RFX2-223	ENST00000592883	ARHGDIB	P52566	201 aa		12.26	□□□□□ -0.45
RFX2-223	ENST00000592883	KPNB1	Q14974	876 aa	Known RBP	12.26	□□□□□ -0.45
RFX2-223	ENST00000592883	HLA-DRB5	Q30154	266 aa		12.26	□□□□□ -0.45
RFX2-223	ENST00000592883	TPTE2P1	Q5T6R2	138 aa		12.26	□□□□□ -0.45
RFX2-223	ENST00000592883	UTS2B	Q765I0	119 aa		12.26	□□□□□ -0.45
RFX2-223	ENST00000592883	FAM220A	Q7Z4H9	259 aa		12.26	□□□□□ -0.45
RFX2-223	ENST00000592883	AMIGO2	Q86SJ2	522 aa		12.26	□□□□□ -0.45
RFX2-223	ENST00000592883	OR5D18	Q8NGL1	313 aa		12.26	□□□□□ -0.45
RFX2-223	ENST00000592883	OR2G2	Q8NGZ5	317 aa		12.26	□□□□□ -0.45
RFX2-223	ENST00000592883	OPALIN	Q96PE5	141 aa		12.26	□□□□□ -0.45
RFX2-223	ENST00000592883	SPACA5	Q96QH8	159 aa		12.26	□□□□□ -0.45
RFX2-223	ENST00000592883	CIB1	Q99828	191 aa		12.26	□□□□□ -0.45
RFX2-223	ENST00000592883	LY6L	H3BQJ8	138 aa		12.25	□□□□□ -0.45
RFX2-223	ENST00000592883	TOR1A	O14656	332 aa		12.25	□□□□□ -0.45
RFX2-223	ENST00000592883	KDM4B	O94953	1096 aa		12.25	□□□□□ -0.45
RFX2-223	ENST00000592883	DUS4L	O95620	317 aa	Known RBP	12.25	□□□□□ -0.45
RFX2-223	ENST00000592883	ZNF44	P15621	663 aa		12.25	□□□□□ -0.45
RFX2-223	ENST00000592883	ZNF20	P17024	532 aa		12.25	□□□□□ -0.45
RFX2-223	ENST00000592883	LMO1	P25800	156 aa		12.25	□□□□□ -0.45
RFX2-223	ENST00000592883	PTGFR	P43088	359 aa		12.25	□□□□□ -0.45
RFX2-223	ENST00000592883	OR3A4P	P47883	348 aa		12.25	□□□□□ -0.45
RFX2-223	ENST00000592883	NANOS3	P60323	173 aa	Known RBP	12.25	□□□□□ -0.45
RFX2-223	ENST00000592883	SCN1B	Q07699	218 aa		12.25	□□□□□ -0.45
RFX2-223	ENST00000592883	EGFEM1P	Q0D2K5	195 aa		12.25	□□□□□ -0.45
RFX2-223	ENST00000592883	RBM39	Q14498	530 aa	Known RBP	12.25	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms