RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 OR5D13Q8NGL4 314 aa12.84□□□□□ -0.35
LIG3-215ENST00000592690 TNFAIP8L1Q8WVP5 186 aa12.84□□□□□ -0.35
LIG3-215ENST00000592690 TAF15Q92804 592 aaKnown RBP eCLIP12.84□□□□□ -0.35
LIG3-215ENST00000592690 GCDHQ92947 438 aaPredicted RBP12.84□□□□□ -0.35
LIG3-215ENST00000592690 OR14A2Q96R54 314 aa12.84□□□□□ -0.35
LIG3-215ENST00000592690 FAM192AQ9GZU8 254 aa12.84□□□□□ -0.35
LIG3-215ENST00000592690 EXOSC4Q9NPD3 245 aaKnown RBP12.84□□□□□ -0.35
LIG3-215ENST00000592690 NOX4Q9NPH5 578 aa12.84□□□□□ -0.35
LIG3-215ENST00000592690 SCN3BQ9NY72 215 aa12.84□□□□□ -0.35
LIG3-215ENST00000592690 ERGIC3Q9Y282 383 aa12.84□□□□□ -0.35
LIG3-215ENST00000592690 FBN3Q75N90 2809 aa12.84□□□□□ -0.35
LIG3-215ENST00000592690 TRAV8-7A0A075B6U6 113 aa12.83□□□□□ -0.36
LIG3-215ENST00000592690 A0A1W2PPH5 198 aa12.83□□□□□ -0.36
LIG3-215ENST00000592690 A0A1W2PPK0 400 aa12.83□□□□□ -0.36
LIG3-215ENST00000592690 SH2D1BO14796 132 aa12.83□□□□□ -0.36
LIG3-215ENST00000592690 MAGEB3O15480 346 aa12.83□□□□□ -0.36
LIG3-215ENST00000592690 ALDOBP05062 364 aa12.83□□□□□ -0.36
LIG3-215ENST00000592690 IGFBP3P17936 291 aaPredicted RBP12.83□□□□□ -0.36
LIG3-215ENST00000592690 SAA4P35542 130 aa12.83□□□□□ -0.36
LIG3-215ENST00000592690 OR3A4PP47883 348 aa12.83□□□□□ -0.36
LIG3-215ENST00000592690 UBE2E1P51965 193 aa12.83□□□□□ -0.36
LIG3-215ENST00000592690 PPP3R1P63098 170 aa12.83□□□□□ -0.36
LIG3-215ENST00000592690 SLC35A2P78381 396 aa12.83□□□□□ -0.36
LIG3-215ENST00000592690 DDI2Q5TDH0 399 aa12.83□□□□□ -0.36
LIG3-215ENST00000592690 RNLSQ5VYX0 342 aa12.83□□□□□ -0.36
LIG3-215ENST00000592690 Q6P435 159 aa12.83□□□□□ -0.36
LIG3-215ENST00000592690 PXT1Q8NFP0 134 aa12.83□□□□□ -0.36
LIG3-215ENST00000592690 OR10K1Q8NGX5 313 aa12.83□□□□□ -0.36
LIG3-215ENST00000592690 MYDGFQ969H8 173 aa12.83□□□□□ -0.36
LIG3-215ENST00000592690 CPNE2Q96FN4 548 aaPredicted RBP12.83□□□□□ -0.36
LIG3-215ENST00000592690 OR5M11Q96RB7 305 aa12.83□□□□□ -0.36
LIG3-215ENST00000592690 MND1Q9BWT6 205 aa12.83□□□□□ -0.36
LIG3-215ENST00000592690 CDCA4Q9BXL8 241 aa12.83□□□□□ -0.36
LIG3-215ENST00000592690 RHOFQ9HBH0 211 aa12.83□□□□□ -0.36
LIG3-215ENST00000592690 TMEM138Q9NPI0 162 aa12.83□□□□□ -0.36
LIG3-215ENST00000592690 GLS2Q9UI32 602 aa12.83□□□□□ -0.36
LIG3-215ENST00000592690 LSM2Q9Y333 95 aaKnown RBP12.83□□□□□ -0.36
LIG3-215ENST00000592690 PCDHGB5Q9Y5G0 923 aa12.83□□□□□ -0.36
LIG3-215ENST00000592690 ANK2Q01484 3957 aa12.82□□□□□ -0.36
LIG3-215ENST00000592690 TRBV5-7A0A0A0MS05 114 aa12.82□□□□□ -0.36
LIG3-215ENST00000592690 MEIOCA2RUB1 952 aa12.82□□□□□ -0.36
LIG3-215ENST00000592690 C17orf98A8MV24 154 aa12.82□□□□□ -0.36
LIG3-215ENST00000592690 IGHV4-59P01825 116 aa12.82□□□□□ -0.36
LIG3-215ENST00000592690 HKR1P10072 659 aa12.82□□□□□ -0.36
LIG3-215ENST00000592690 FSTP19883 344 aa12.82□□□□□ -0.36
LIG3-215ENST00000592690 BDKRB2P30411 391 aa12.82□□□□□ -0.36
LIG3-215ENST00000592690 MTNR1BP49286 362 aa12.82□□□□□ -0.36
LIG3-215ENST00000592690 COMPP49747 757 aaPredicted RBP12.82□□□□□ -0.36
LIG3-215ENST00000592690 SCN1BQ07699 218 aa12.82□□□□□ -0.36
LIG3-215ENST00000592690 RIPK1Q13546 671 aa12.82□□□□□ -0.36
LIG3-215ENST00000592690 IRF3Q14653 427 aa12.82□□□□□ -0.36
LIG3-215ENST00000592690 ELP2Q6IA86 826 aa12.82□□□□□ -0.36
LIG3-215ENST00000592690 C12orf54Q6X4T0 127 aa12.82□□□□□ -0.36
LIG3-215ENST00000592690 ZNF782Q6ZMW2 699 aaPredicted RBP12.82□□□□□ -0.36
LIG3-215ENST00000592690 LDLRAD3Q86YD5 345 aa12.82□□□□□ -0.36
LIG3-215ENST00000592690 TBC1D15Q8TC07 691 aa12.82□□□□□ -0.36
LIG3-215ENST00000592690 DERL3Q96Q80 235 aa12.82□□□□□ -0.36
LIG3-215ENST00000592690 CHIAQ9BZP6 476 aa12.82□□□□□ -0.36
LIG3-215ENST00000592690 PPA2Q9H2U2 334 aa12.82□□□□□ -0.36
LIG3-215ENST00000592690 MGST3O14880 152 aa12.81□□□□□ -0.36
LIG3-215ENST00000592690 PIN1P1O15428 100 aa12.81□□□□□ -0.36
LIG3-215ENST00000592690 GPX5O75715 221 aa12.81□□□□□ -0.36
LIG3-215ENST00000592690 CDRT1O95170 752 aa12.81□□□□□ -0.36
LIG3-215ENST00000592690 CD1AP06126 327 aa12.81□□□□□ -0.36
LIG3-215ENST00000592690 FBP1P09467 338 aa12.81□□□□□ -0.36
LIG3-215ENST00000592690 ZNF728P0DKX0 622 aa12.81□□□□□ -0.36
LIG3-215ENST00000592690 ZNF44P15621 663 aa12.81□□□□□ -0.36
LIG3-215ENST00000592690 COX7A1P24310 79 aa12.81□□□□□ -0.36
LIG3-215ENST00000592690 LMO1P25800 156 aa12.81□□□□□ -0.36
LIG3-215ENST00000592690 ZNF93P35789 620 aaPredicted RBP12.81□□□□□ -0.36
LIG3-215ENST00000592690 IER3P46695 156 aa12.81□□□□□ -0.36
LIG3-215ENST00000592690 HSPA13P48723 471 aa12.81□□□□□ -0.36
LIG3-215ENST00000592690 BMXP51813 675 aa12.81□□□□□ -0.36
LIG3-215ENST00000592690 BDH1Q02338 343 aa12.81□□□□□ -0.36
LIG3-215ENST00000592690 ACSM1Q08AH1 577 aa12.81□□□□□ -0.36
LIG3-215ENST00000592690 C16orf87Q6PH81 154 aa12.81□□□□□ -0.36
LIG3-215ENST00000592690 ASCL4Q6XD76 172 aa12.81□□□□□ -0.36
LIG3-215ENST00000592690 PPP1R35Q8TAP8 253 aa12.81□□□□□ -0.36
LIG3-215ENST00000592690 C17orf50Q8WW18 174 aa12.81□□□□□ -0.36
LIG3-215ENST00000592690 SSMEM1Q8WWF3 244 aa12.81□□□□□ -0.36
LIG3-215ENST00000592690 CNBD2Q96M20 576 aa12.81□□□□□ -0.36
LIG3-215ENST00000592690 ZNF714Q96N38 554 aa12.81□□□□□ -0.36
LIG3-215ENST00000592690 NR1H4Q96RI1 486 aaPredicted RBP12.81□□□□□ -0.36
LIG3-215ENST00000592690 ZNF184Q99676 751 aaPredicted RBP12.81□□□□□ -0.36
LIG3-215ENST00000592690 DUSP21Q9H596 190 aa12.81□□□□□ -0.36
LIG3-215ENST00000592690 ZNRD1Q9P1U0 126 aa12.81□□□□□ -0.36
LIG3-215ENST00000592690 SF3B6Q9Y3B4 125 aaKnown RBP12.81□□□□□ -0.36
LIG3-215ENST00000592690 TPRKBQ9Y3C4 175 aa12.81□□□□□ -0.36
LIG3-215ENST00000592690 FAM96BQ9Y3D0 163 aa12.81□□□□□ -0.36
LIG3-215ENST00000592690 A0A0G2JK05 382 aa12.8□□□□□ -0.36
LIG3-215ENST00000592690 hCG_1809904A0A1W2PP81 198 aa12.8□□□□□ -0.36
LIG3-215ENST00000592690 A0A1W2PPE2 198 aa12.8□□□□□ -0.36
LIG3-215ENST00000592690 A0A1W2PR64 198 aa12.8□□□□□ -0.36
LIG3-215ENST00000592690 A0A1W2PRV1 198 aa12.8□□□□□ -0.36
LIG3-215ENST00000592690 hADV38S2A0JD32 116 aa12.8□□□□□ -0.36
LIG3-215ENST00000592690 SLC33A1O00400 549 aaPredicted RBP12.8□□□□□ -0.36
LIG3-215ENST00000592690 HTR3BO95264 441 aa12.8□□□□□ -0.36
LIG3-215ENST00000592690 CRHBPP24387 322 aa12.8□□□□□ -0.36
LIG3-215ENST00000592690 PTGFRP43088 359 aa12.8□□□□□ -0.36
LIG3-215ENST00000592690 P2RX3P56373 397 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms