RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 CDRT15L2A8MXV6 281 aa14.98□□□□□ -0.01
SMARCA4-215ENST00000590574 ADAM10O14672 748 aa14.98□□□□□ -0.01
SMARCA4-215ENST00000590574 SCAF4O95104 1147 aaKnown RBP14.98□□□□□ -0.01
SMARCA4-215ENST00000590574 CA6P23280 308 aa14.98□□□□□ -0.01
SMARCA4-215ENST00000590574 OR8U1Q8NH10 309 aa14.98□□□□□ -0.01
SMARCA4-215ENST00000590574 OPA3Q9H6K4 179 aa14.98□□□□□ -0.01
SMARCA4-215ENST00000590574 ESRP2Q9H6T0 727 aaKnown RBP14.98□□□□□ -0.01
SMARCA4-215ENST00000590574 TMEM38BQ9NVV0 291 aa14.98□□□□□ -0.01
SMARCA4-215ENST00000590574 TIMM8BQ9Y5J9 83 aaPredicted RBP14.98□□□□□ -0.01
SMARCA4-215ENST00000590574 ALPK2Q86TB3 2170 aa14.98□□□□□ -0.01
SMARCA4-215ENST00000590574 C7orf77A4D0Y5 90 aa14.98□□□□□ -0.01
SMARCA4-215ENST00000590574 ARGFXA6NJG6 315 aa14.98□□□□□ -0.01
SMARCA4-215ENST00000590574 TMEM14DPA8MWL7 114 aa14.98□□□□□ -0.01
SMARCA4-215ENST00000590574 SPAG17Q6Q759 2223 aa14.98□□□□□ -0.01
SMARCA4-215ENST00000590574 FAM58AQ8N1B3 248 aa14.98□□□□□ -0.01
SMARCA4-215ENST00000590574 OR2Y1Q8NGV0 311 aa14.98□□□□□ -0.01
SMARCA4-215ENST00000590574 ADGRG7Q96K78 797 aa14.98□□□□□ -0.01
SMARCA4-215ENST00000590574 TOLLIPQ9H0E2 274 aa14.98□□□□□ -0.01
SMARCA4-215ENST00000590574 RBFOX3A6NFN3 312 aa14.98□□□□□ -0.01
SMARCA4-215ENST00000590574 NPBWR1P48145 328 aa14.98□□□□□ -0.01
SMARCA4-215ENST00000590574 CLEC12BQ2HXU8 276 aa14.98□□□□□ -0.01
SMARCA4-215ENST00000590574 SAMD10Q9BYL1 202 aa14.98□□□□□ -0.01
SMARCA4-215ENST00000590574 HEATR5BQ9P2D3 2071 aa14.98□□□□□ -0.01
SMARCA4-215ENST00000590574 COL4A6Q14031 1691 aa14.97□□□□□ -0.01
SMARCA4-215ENST00000590574 IGKV3D-11A0A0A0MRZ8 115 aa14.97□□□□□ -0.01
SMARCA4-215ENST00000590574 TRAV14DV4A0A0A6YYC5 116 aa14.97□□□□□ -0.01
SMARCA4-215ENST00000590574 A8MXK9 166 aa14.97□□□□□ -0.01
SMARCA4-215ENST00000590574 OR2A2Q6IF42 318 aa14.97□□□□□ -0.01
SMARCA4-215ENST00000590574 GAPTQ8N292 157 aa14.97□□□□□ -0.01
SMARCA4-215ENST00000590574 SLC35G3Q8N808 338 aa14.97□□□□□ -0.01
SMARCA4-215ENST00000590574 UHRF2Q96PU4 802 aa14.97□□□□□ -0.01
SMARCA4-215ENST00000590574 FRMPD3Q5JV73 1810 aa14.97□□□□□ -0.01
SMARCA4-215ENST00000590574 NKX2-6A6NCS4 301 aa14.97□□□□□ -0.01
SMARCA4-215ENST00000590574 FCGR3AP08637 254 aa14.97□□□□□ -0.01
SMARCA4-215ENST00000590574 EWSR1Q01844 656 aaKnown RBP eCLIP14.97□□□□□ -0.011e-6■■□□□ 14.1
SMARCA4-215ENST00000590574 PRAMEF5Q5TYX0 476 aa14.97□□□□□ -0.01
SMARCA4-215ENST00000590574 PRAMEF6Q5VXH4 476 aa14.97□□□□□ -0.01
SMARCA4-215ENST00000590574 ACTR3CQ9C0K3 210 aaPredicted RBP14.97□□□□□ -0.01
SMARCA4-215ENST00000590574 TNFSF4P23510 183 aa14.97□□□□□ -0.01
SMARCA4-215ENST00000590574 ZNF610Q8N9Z0 462 aa14.97□□□□□ -0.01
SMARCA4-215ENST00000590574 HPSE2Q8WWQ2 592 aa14.97□□□□□ -0.01
SMARCA4-215ENST00000590574 RTN4RQ9BZR6 473 aa14.97□□□□□ -0.01
SMARCA4-215ENST00000590574 TGIF2Q9GZN2 237 aa14.97□□□□□ -0.01
SMARCA4-215ENST00000590574 DEDDO75618 318 aa14.97□□□□□ -0.01
SMARCA4-215ENST00000590574 TMEM41BQ5BJD5 291 aa14.97□□□□□ -0.01
SMARCA4-215ENST00000590574 SPINK14Q6IE38 97 aa14.97□□□□□ -0.01
SMARCA4-215ENST00000590574 LDLRAD3Q86YD5 345 aa14.97□□□□□ -0.01
SMARCA4-215ENST00000590574 LIPGQ9Y5X9 500 aa14.97□□□□□ -0.01
SMARCA4-215ENST00000590574 SLC22A20A6NK97 555 aa14.96□□□□□ -0.01
SMARCA4-215ENST00000590574 LINC01387J3KSC0 135 aa14.96□□□□□ -0.01
SMARCA4-215ENST00000590574 HKR1P10072 659 aa14.96□□□□□ -0.01
SMARCA4-215ENST00000590574 PMP22Q01453 160 aa14.96□□□□□ -0.01
SMARCA4-215ENST00000590574 BATFQ16520 125 aa14.96□□□□□ -0.01
SMARCA4-215ENST00000590574 FNDC7Q5VTL7 733 aa14.96□□□□□ -0.01
SMARCA4-215ENST00000590574 NCR3LG1Q68D85 454 aa14.96□□□□□ -0.01
SMARCA4-215ENST00000590574 MSI2Q96DH6 328 aaKnown RBP14.96□□□□□ -0.01
SMARCA4-215ENST00000590574 TLNRD1Q9H1K6 362 aa14.96□□□□□ -0.01
SMARCA4-215ENST00000590574 GAR1Q9NY12 217 aaKnown RBP14.96□□□□□ -0.01
SMARCA4-215ENST00000590574 CACNG5Q9UF02 275 aa14.96□□□□□ -0.01
SMARCA4-215ENST00000590574 KCNMB2Q9Y691 235 aa14.96□□□□□ -0.01
SMARCA4-215ENST00000590574 SULT1A2P50226 295 aa14.96□□□□□ -0.01
SMARCA4-215ENST00000590574 ABHD3Q8WU67 409 aa14.96□□□□□ -0.01
SMARCA4-215ENST00000590574 ACTL6BO94805 426 aa14.96□□□□□ -0.01
SMARCA4-215ENST00000590574 FABP1P07148 127 aa14.96□□□□□ -0.01
SMARCA4-215ENST00000590574 OR11L1Q8NGX0 322 aa14.96□□□□□ -0.01
SMARCA4-215ENST00000590574 TRIB1Q96RU8 372 aa14.96□□□□□ -0.01
SMARCA4-215ENST00000590574 RAB40CQ96S21 281 aa14.96□□□□□ -0.01
SMARCA4-215ENST00000590574 A0A0J9YW62 118 aa14.96□□□□□ -0.02
SMARCA4-215ENST00000590574 CEACAM6P40199 344 aa14.96□□□□□ -0.02
SMARCA4-215ENST00000590574 OR10V1Q8NGI7 309 aa14.96□□□□□ -0.02
SMARCA4-215ENST00000590574 IGFBP3P17936 291 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 FGF7P21781 194 aa14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 UBALD2Q8IYN6 164 aa14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 MUCL1Q96DR8 90 aa14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 AQP10Q96PS8 301 aa14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 GPR35Q9HC97 309 aa14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 A0A1W2PR77 199 aa14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 RPS16P62249 146 aaKnown RBP14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 ZNF154Q13106 437 aa14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 ZNF528Q3MIS6 628 aa14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 OR13D1Q8NGV5 346 aa14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 GALMQ96C23 342 aa14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 TAAR9Q96RI9 348 aa14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 MYOZ1Q9NP98 299 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 TRAF3IP2O43734 574 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 CHST1O43916 411 aa14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 KRASP01116 189 aa14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 SEC11BP0C7V7 166 aa14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 ACKR3P25106 362 aa14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 NHLH2Q02577 135 aa14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 TMEM211Q6ICI0 200 aa14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 NUDT16L1Q9BRJ7 211 aaKnown RBP14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 DUSP15Q9H1R2 295 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 CCL28Q9NRJ3 127 aa14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 UNC13CQ8NB66 2214 aa14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 A0A1W2PR80 420 aa14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 TRDCB7Z8K6 153 aa14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 METTL15P1P0C7V9 234 aa14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 GPR12P47775 334 aa14.95□□□□□ -0.02
SMARCA4-215ENST00000590574 FAM27BQ5VT28 67 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms