RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, human

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-228	ENST00000590347	CYB5R3	P00387	301 aa	Predicted RBP	13.26	□□□□□ -0.29
CIRBP-228	ENST00000590347	ASAH2B	P0C7U1	165 aa		13.26	□□□□□ -0.29
CIRBP-228	ENST00000590347	CDKN1A	P38936	164 aa		13.26	□□□□□ -0.29
CIRBP-228	ENST00000590347	TLE4	Q04727	773 aa		13.26	□□□□□ -0.29
CIRBP-228	ENST00000590347	ABCA11P	Q4W5N1	156 aa		13.26	□□□□□ -0.29
CIRBP-228	ENST00000590347	FBXW9	Q5XUX1	488 aa		13.26	□□□□□ -0.29
CIRBP-228	ENST00000590347	GLRX2	Q9NS18	164 aa		13.26	□□□□□ -0.29
CIRBP-228	ENST00000590347	MCTS1	Q9ULC4	181 aa	Known RBP	13.26	□□□□□ -0.29
CIRBP-228	ENST00000590347	HPN	P05981	417 aa		13.26	□□□□□ -0.29
CIRBP-228	ENST00000590347	ZNF20	P17024	532 aa		13.26	□□□□□ -0.29
CIRBP-228	ENST00000590347	CSNK1A1	P48729	337 aa		13.26	□□□□□ -0.29
CIRBP-228	ENST00000590347	DYNLT3	P51808	116 aa		13.26	□□□□□ -0.29
CIRBP-228	ENST00000590347	ENDOG	Q14249	297 aa	Known RBP	13.26	□□□□□ -0.29
CIRBP-228	ENST00000590347	ABLIM2	Q6H8Q1	611 aa		13.26	□□□□□ -0.29
CIRBP-228	ENST00000590347	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	13.26	□□□□□ -0.29
CIRBP-228	ENST00000590347	OR14L1P	Q8NHC6	308 aa		13.26	□□□□□ -0.29
CIRBP-228	ENST00000590347	CCL4L1	Q8NHW4	92 aa		13.26	□□□□□ -0.29
CIRBP-228	ENST00000590347	CCNL2	Q96S94	520 aa	Predicted RBP	13.26	□□□□□ -0.29
CIRBP-228	ENST00000590347	RSG1	Q9BU20	258 aa		13.26	□□□□□ -0.29
CIRBP-228	ENST00000590347	EMC6	Q9BV81	110 aa		13.26	□□□□□ -0.29
CIRBP-228	ENST00000590347	FAM60A	Q9NP50	221 aa		13.26	□□□□□ -0.29
CIRBP-228	ENST00000590347	C20orf202	A1L168	122 aa		13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347	SHISA7	A6NL88	538 aa		13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347	PHF1	O43189	567 aa	Predicted RBP	13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347	ZNF823	P16415	610 aa		13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347	FST	P19883	344 aa		13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347	GAGE1	Q13065	139 aa		13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347	LYPD6	Q86Y78	171 aa		13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347	LGI3	Q8N145	548 aa		13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347	GBGT1	Q8N5D6	347 aa		13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347	ST6GALNAC3	Q8NDV1	305 aa		13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347	TUBD1	Q9UJT1	453 aa		13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347	RP1	P56715	2156 aa		13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347		A0A0U1RQK1	487 aa		13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347	TCRBV21S2A2	A0A5A6	115 aa		13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347	ANKUB1	A6NFN9	424 aa		13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347	ZNF850	A8MQ14	1090 aa		13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347	TMEM14DP	A8MWL7	114 aa		13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347	TTR	P02766	147 aa		13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347	CFP	P27918	469 aa		13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347	CXorf66	Q5JRM2	361 aa	Predicted RBP	13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347	DPPA3	Q6W0C5	159 aa		13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347	ZNF765	Q7L2R6	523 aa		13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347	STPG4	Q8N801	248 aa		13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347	NOXO1	Q8NFA2	376 aa		13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347		Q8NFD4	153 aa		13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347	LIN37	Q96GY3	246 aa	Predicted RBP	13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347	SCGB3A2	Q96PL1	93 aa		13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347	GPX7	Q96SL4	187 aa	Predicted RBP	13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347	B3GAT1	Q9P2W7	334 aa		13.25	□□□□□ -0.29
CIRBP-228	ENST00000590347	C5orf63	A6NC05	138 aa		13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	ST8SIA3	O43173	380 aa		13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	HCRTR2	O43614	444 aa		13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	BPNT1	O95861	308 aa		13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	OPN1LW	P04000	364 aa		13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	IL6R	P08887	468 aa	Predicted RBP	13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	DRD3	P35462	400 aa		13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	ATG4D	Q86TL0	474 aa	Predicted RBP	13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	FBXL14	Q8N1E6	418 aa		13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	OR14C36	Q8NHC7	312 aa		13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	NUDT22	Q9BRQ3	303 aa		13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	ZNF703	Q9H7S9	590 aa	Predicted RBP	13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	ZNF160	Q9HCG1	818 aa		13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	NKX2-6	A6NCS4	301 aa		13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	CCDC85C	A6NKD9	419 aa		13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	C5orf67	F2Z3F1	127 aa		13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	TGFBR3L	H3BV60	316 aa		13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	GALR1	P47211	349 aa		13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	BCORP1	Q8N888	145 aa		13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	MED29	Q9NX70	200 aa		13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	CELSR3	Q9NYQ7	3312 aa		13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	FRY	Q5TBA9	3013 aa		13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	HSPB1	P04792	205 aa	Known RBP	13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	CHRNA7	P36544	502 aa		13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	SUCLG1	P53597	346 aa	Known RBP	13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	ZNF506	Q5JVG8	444 aa		13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	ARMC6	Q6NXE6	501 aa		13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	TCF23	Q7RTU1	214 aa		13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	ZNF440	Q8IYI8	595 aa		13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	OR2C3	Q8N628	320 aa		13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	SRD5A3	Q9H8P0	318 aa		13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	PATZ1	Q9HBE1	687 aa	Known RBP	13.24	□□□□□ -0.29
CIRBP-228	ENST00000590347	NXPH2	O95156	264 aa		13.23	□□□□□ -0.29
CIRBP-228	ENST00000590347	ZNF43	P17038	809 aa		13.23	□□□□□ -0.29
CIRBP-228	ENST00000590347	GCH1	P30793	250 aa		13.23	□□□□□ -0.29
CIRBP-228	ENST00000590347	FOXK1	P85037	733 aa		13.23	□□□□□ -0.29
CIRBP-228	ENST00000590347	ZNF92	Q03936	586 aa		13.23	□□□□□ -0.29
CIRBP-228	ENST00000590347	GNMT	Q14749	295 aa		13.23	□□□□□ -0.29
CIRBP-228	ENST00000590347	NKAIN3	Q8N8D7	197 aa		13.23	□□□□□ -0.29
CIRBP-228	ENST00000590347	SMIM7	Q9BQ49	75 aa		13.23	□□□□□ -0.29
CIRBP-228	ENST00000590347	IGLV1-36	A0A0B4J1U3	117 aa		13.23	□□□□□ -0.29
CIRBP-228	ENST00000590347	KIR2DL5B	A0A0G2JN68	375 aa		13.23	□□□□□ -0.29
CIRBP-228	ENST00000590347	KIR2DL5B	A0A0G2JPC4	375 aa		13.23	□□□□□ -0.29
CIRBP-228	ENST00000590347		H0YGG7	62 aa		13.23	□□□□□ -0.29
CIRBP-228	ENST00000590347	GSTP1	P09211	210 aa	Known RBP	13.23	□□□□□ -0.29
CIRBP-228	ENST00000590347	PPM1F	P49593	454 aa	Predicted RBP	13.23	□□□□□ -0.29
CIRBP-228	ENST00000590347	CARD18	P57730	90 aa		13.23	□□□□□ -0.29
CIRBP-228	ENST00000590347	ARF3	P61204	181 aa	Predicted RBP	13.23	□□□□□ -0.29

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