RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 SRRM5B3KS81 715 aa21.94■■□□□ 1.1
SCAMP4-210ENST00000588555 CBX5P45973 191 aa21.94■■□□□ 1.1
SCAMP4-210ENST00000588555 TAS2R19P59542 299 aa21.94■■□□□ 1.1
SCAMP4-210ENST00000588555 ACP7Q6ZNF0 438 aa21.94■■□□□ 1.1
SCAMP4-210ENST00000588555 OR4S1Q8NGB4 309 aa21.94■■□□□ 1.1
SCAMP4-210ENST00000588555 OR4D10Q8NGI6 311 aa21.94■■□□□ 1.1
SCAMP4-210ENST00000588555 OR4C16Q8NGL9 310 aa21.94■■□□□ 1.1
SCAMP4-210ENST00000588555 DYRK2Q92630 601 aa21.94■■□□□ 1.1
SCAMP4-210ENST00000588555 SNAPC3Q92966 411 aa21.94■■□□□ 1.1
SCAMP4-210ENST00000588555 IFT46Q9NQC8 304 aa21.94■■□□□ 1.1
SCAMP4-210ENST00000588555 NLKQ9UBE8 527 aa21.94■■□□□ 1.1
SCAMP4-210ENST00000588555 PLEKHA6Q9Y2H5 1048 aa21.94■■□□□ 1.1
SCAMP4-210ENST00000588555 ARFGEF3Q5TH69 2177 aa21.93■■□□□ 1.1
SCAMP4-210ENST00000588555 TRAV24A0A0B4J272 114 aa21.93■■□□□ 1.1
SCAMP4-210ENST00000588555 NAP1L6A6NFF2 107 aa21.93■■□□□ 1.1
SCAMP4-210ENST00000588555 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP21.93■■□□□ 1.1
SCAMP4-210ENST00000588555 CD74P04233 296 aa21.93■■□□□ 1.1
SCAMP4-210ENST00000588555 AKAIN1P0CW23 69 aa21.93■■□□□ 1.1
SCAMP4-210ENST00000588555 GLRA1P23415 457 aa21.93■■□□□ 1.1
SCAMP4-210ENST00000588555 STEAP1BQ6NZ63 245 aa21.93■■□□□ 1.1
SCAMP4-210ENST00000588555 GCSAMQ8N6F7 178 aa21.93■■□□□ 1.1
SCAMP4-210ENST00000588555 SPACA1Q9HBV2 294 aa21.93■■□□□ 1.1
SCAMP4-210ENST00000588555 UBE2QL1A1L167 161 aa21.92■■□□□ 1.1
SCAMP4-210ENST00000588555 H3BUI4 141 aa21.92■■□□□ 1.1
SCAMP4-210ENST00000588555 PYCARD-AS1I3L0S3 204 aa21.92■■□□□ 1.1
SCAMP4-210ENST00000588555 EGR1P18146 543 aa21.92■■□□□ 1.1
SCAMP4-210ENST00000588555 CCL8P80075 99 aa21.92■■□□□ 1.1
SCAMP4-210ENST00000588555 FAM209AQ5JX71 171 aa21.92■■□□□ 1.1
SCAMP4-210ENST00000588555 OR52W1Q6IF63 320 aa21.92■■□□□ 1.1
SCAMP4-210ENST00000588555 MUC15Q8N387 334 aa21.92■■□□□ 1.1
SCAMP4-210ENST00000588555 ERGIC1Q969X5 290 aa21.92■■□□□ 1.1
SCAMP4-210ENST00000588555 MMP28Q9H239 520 aa21.92■■□□□ 1.1
SCAMP4-210ENST00000588555 ZNF736B4DX44 427 aaPredicted RBP21.92■■□□□ 1.1
SCAMP4-210ENST00000588555 LHBP01229 141 aa21.92■■□□□ 1.1
SCAMP4-210ENST00000588555 HLA-DMAP28067 261 aa21.92■■□□□ 1.1
SCAMP4-210ENST00000588555 HOGA1Q86XE5 327 aa21.92■■□□□ 1.1
SCAMP4-210ENST00000588555 SUMF2Q8NBJ7 301 aa21.92■■□□□ 1.1
SCAMP4-210ENST00000588555 Q8TCH9 128 aa21.92■■□□□ 1.1
SCAMP4-210ENST00000588555 CMSS1Q9BQ75 279 aaKnown RBP21.92■■□□□ 1.1
SCAMP4-210ENST00000588555 ZNF230Q9UIE0 474 aaPredicted RBP21.92■■□□□ 1.1
SCAMP4-210ENST00000588555 GIFP27352 417 aa21.91■■□□□ 1.1
SCAMP4-210ENST00000588555 CCR6P51684 374 aa21.91■■□□□ 1.1
SCAMP4-210ENST00000588555 TESK1Q15569 626 aa21.91■■□□□ 1.1
SCAMP4-210ENST00000588555 MS4A5Q9H3V2 200 aa21.91■■□□□ 1.1
SCAMP4-210ENST00000588555 RASL12Q9NYN1 266 aa21.91■■□□□ 1.1
SCAMP4-210ENST00000588555 DEGS1O15121 323 aa21.9■■□□□ 1.1
SCAMP4-210ENST00000588555 OR2H2O95918 312 aa21.9■■□□□ 1.1
SCAMP4-210ENST00000588555 FAUP35544 74 aaKnown RBP21.9■■□□□ 1.1
SCAMP4-210ENST00000588555 SMIM21Q3B7S5 101 aa21.9■■□□□ 1.1
SCAMP4-210ENST00000588555 SFRP4Q6FHJ7 346 aaPredicted RBP21.9■■□□□ 1.1
SCAMP4-210ENST00000588555 FIP1L1Q6UN15 594 aaKnown RBP21.9■■□□□ 1.1
SCAMP4-210ENST00000588555 CACNG6Q9BXT2 260 aa21.9■■□□□ 1.1
SCAMP4-210ENST00000588555 DYNLRB1Q9NP97 96 aa21.9■■□□□ 1.1
SCAMP4-210ENST00000588555 hCG_2014768A0A024R1R8 64 aa21.89■■□□□ 1.1
SCAMP4-210ENST00000588555 KNG1P01042 644 aa21.89■■□□□ 1.1
SCAMP4-210ENST00000588555 GLAP06280 429 aa21.89■■□□□ 1.1
SCAMP4-210ENST00000588555 ZNF44P15621 663 aa21.89■■□□□ 1.1
SCAMP4-210ENST00000588555 DTYMKP23919 212 aa21.89■■□□□ 1.1
SCAMP4-210ENST00000588555 TINAGL1Q9GZM7 467 aaPredicted RBP21.89■■□□□ 1.1
SCAMP4-210ENST00000588555 DPAGT1Q9H3H5 408 aa21.89■■□□□ 1.1
SCAMP4-210ENST00000588555 MCUBQ9NWR8 336 aa21.89■■□□□ 1.1
SCAMP4-210ENST00000588555 A0A1W2PPR1 153 aa21.89■■□□□ 1.09
SCAMP4-210ENST00000588555 MCRIP1C9JLW8 97 aa21.89■■□□□ 1.09
SCAMP4-210ENST00000588555 M0QYG6 137 aa21.89■■□□□ 1.09
SCAMP4-210ENST00000588555 SLC33A1O00400 549 aaPredicted RBP21.89■■□□□ 1.09
SCAMP4-210ENST00000588555 HS3ST1O14792 307 aa21.89■■□□□ 1.09
SCAMP4-210ENST00000588555 SH2D1BO14796 132 aa21.89■■□□□ 1.09
SCAMP4-210ENST00000588555 RAB3DO95716 219 aa21.89■■□□□ 1.09
SCAMP4-210ENST00000588555 HAND1O96004 215 aa21.89■■□□□ 1.09
SCAMP4-210ENST00000588555 TNFRSF1AP19438 455 aa21.89■■□□□ 1.09
SCAMP4-210ENST00000588555 SRSF1Q07955 248 aaKnown RBP eCLIP21.89■■□□□ 1.09
SCAMP4-210ENST00000588555 Q6ZPA2 131 aa21.89■■□□□ 1.09
SCAMP4-210ENST00000588555 BPIFB2Q8N4F0 458 aa21.89■■□□□ 1.09
SCAMP4-210ENST00000588555 RDH5Q92781 318 aa21.89■■□□□ 1.09
SCAMP4-210ENST00000588555 UPRTQ96BW1 309 aa21.89■■□□□ 1.09
SCAMP4-210ENST00000588555 ST6GALNAC5Q9BVH7 336 aa21.89■■□□□ 1.09
SCAMP4-210ENST00000588555 DPCDQ9BVM2 203 aaPredicted RBP21.89■■□□□ 1.09
SCAMP4-210ENST00000588555 C12orf4Q9NQ89 552 aa21.89■■□□□ 1.09
SCAMP4-210ENST00000588555 PPP1R3CQ9UQK1 317 aa21.89■■□□□ 1.09
SCAMP4-210ENST00000588555 SPTAN1Q13813 2472 aaKnown RBP21.88■■□□□ 1.09
SCAMP4-210ENST00000588555 HSPB6O14558 160 aa21.88■■□□□ 1.09
SCAMP4-210ENST00000588555 FCGR3AP08637 254 aa21.88■■□□□ 1.09
SCAMP4-210ENST00000588555 PLET1Q6UQ28 207 aa21.88■■□□□ 1.09
SCAMP4-210ENST00000588555 FAM90A1Q86YD7 464 aa21.88■■□□□ 1.09
SCAMP4-210ENST00000588555 BEST4Q8NFU0 473 aa21.88■■□□□ 1.09
SCAMP4-210ENST00000588555 OR56B4Q8NH76 319 aa21.88■■□□□ 1.09
SCAMP4-210ENST00000588555 MAFIPQ8WZ33 124 aa21.88■■□□□ 1.09
SCAMP4-210ENST00000588555 ZNF701Q9NV72 531 aaPredicted RBP21.88■■□□□ 1.09
SCAMP4-210ENST00000588555 RNF7Q9UBF6 113 aa21.88■■□□□ 1.09
SCAMP4-210ENST00000588555 FAM221AA4D161 298 aa21.87■■□□□ 1.09
SCAMP4-210ENST00000588555 SIRPB1O00241 398 aa21.87■■□□□ 1.09
SCAMP4-210ENST00000588555 NAPSAO96009 420 aa21.87■■□□□ 1.09
SCAMP4-210ENST00000588555 ZNF735P0CB33 412 aa21.87■■□□□ 1.09
SCAMP4-210ENST00000588555 TBPP20226 339 aa21.87■■□□□ 1.09
SCAMP4-210ENST00000588555 LMO1P25800 156 aa21.87■■□□□ 1.09
SCAMP4-210ENST00000588555 CEBPDP49716 269 aaPredicted RBP21.87■■□□□ 1.09
SCAMP4-210ENST00000588555 MRPS15P82914 257 aaKnown RBP21.87■■□□□ 1.09
SCAMP4-210ENST00000588555 TGIF2LYQ8IUE0 185 aa21.87■■□□□ 1.09
SCAMP4-210ENST00000588555 CHST6Q9GZX3 395 aa21.87■■□□□ 1.09
SCAMP4-210ENST00000588555 SAP30LQ9HAJ7 183 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms